Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC018860A_C01 KMC018860A_c01
(465 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAL75899.1| At2g43020/MFL8.12 [Arabidopsis thaliana] 64 8e-10
ref|NP_181830.1| putative amine oxidase; protein id: At2g43020.1... 64 8e-10
ref|NP_191464.1| putative protein; protein id: At3g59050.1, supp... 63 1e-09
gb|AAM62855.1| putative amine oxidase [Arabidopsis thaliana] 63 1e-09
gb|AAK43885.1|AF370508_1 putative protein kinase gb|AAD22129 [Ar... 41 0.007
>gb|AAL75899.1| At2g43020/MFL8.12 [Arabidopsis thaliana]
Length = 490
Score = 63.9 bits (154), Expect = 8e-10
Identities = 32/55 (58%), Positives = 40/55 (72%)
Frame = +2
Query: 299 MESRIKRNPQLTRAPCYGNVSRQQERTPSVIVIGGGMAGIAAARALQDASFQVVL 463
MESR + Q+ RA C+ R + R+PSVIVIGGG GI+AAR LQDASFQV++
Sbjct: 1 MESRKNSDRQMRRANCFSAGERMKTRSPSVIVIGGGFGGISAARTLQDASFQVMV 55
>ref|NP_181830.1| putative amine oxidase; protein id: At2g43020.1, supported by cDNA:
gi_18650597 [Arabidopsis thaliana]
gi|25408829|pir||A84861 probable amine oxidase
[imported] - Arabidopsis thaliana
gi|4531444|gb|AAD22129.1| putative amine oxidase
[Arabidopsis thaliana]
Length = 490
Score = 63.9 bits (154), Expect = 8e-10
Identities = 32/55 (58%), Positives = 40/55 (72%)
Frame = +2
Query: 299 MESRIKRNPQLTRAPCYGNVSRQQERTPSVIVIGGGMAGIAAARALQDASFQVVL 463
MESR + Q+ RA C+ R + R+PSVIVIGGG GI+AAR LQDASFQV++
Sbjct: 1 MESRKNSDRQMRRANCFSAGERMKTRSPSVIVIGGGFGGISAARTLQDASFQVMV 55
>ref|NP_191464.1| putative protein; protein id: At3g59050.1, supported by cDNA:
16421., supported by cDNA: gi_18086417 [Arabidopsis
thaliana] gi|11357513|pir||T47787 hypothetical protein
F17J16.100 - Arabidopsis thaliana
gi|7529748|emb|CAB86933.1| putative protein [Arabidopsis
thaliana] gi|18086418|gb|AAL57665.1|
AT3g59050/F17J16_100 [Arabidopsis thaliana]
gi|23505969|gb|AAN28844.1| At3g59050/F17J16_100
[Arabidopsis thaliana]
Length = 488
Score = 63.2 bits (152), Expect = 1e-09
Identities = 35/56 (62%), Positives = 43/56 (76%), Gaps = 1/56 (1%)
Frame = +2
Query: 299 MESRIKRNPQLTRAPCYGNVSR-QQERTPSVIVIGGGMAGIAAARALQDASFQVVL 463
MES K N QL +A C + +++R+PSVIVIGGGMAGI+AAR LQDASFQVV+
Sbjct: 1 MESGGKTNRQLRKAICVSTDEKMKKKRSPSVIVIGGGMAGISAARTLQDASFQVVV 56
>gb|AAM62855.1| putative amine oxidase [Arabidopsis thaliana]
Length = 488
Score = 63.2 bits (152), Expect = 1e-09
Identities = 35/56 (62%), Positives = 43/56 (76%), Gaps = 1/56 (1%)
Frame = +2
Query: 299 MESRIKRNPQLTRAPCYGNVSR-QQERTPSVIVIGGGMAGIAAARALQDASFQVVL 463
MES K N QL +A C + +++R+PSVIVIGGGMAGI+AAR LQDASFQVV+
Sbjct: 1 MESGGKTNRQLRKAICVSTDEKMKKKRSPSVIVIGGGMAGISAARTLQDASFQVVV 56
>gb|AAK43885.1|AF370508_1 putative protein kinase gb|AAD22129 [Arabidopsis thaliana]
Length = 497
Score = 40.8 bits (94), Expect = 0.007
Identities = 19/36 (52%), Positives = 27/36 (74%)
Frame = +2
Query: 356 VSRQQERTPSVIVIGGGMAGIAAARALQDASFQVVL 463
+ +Q PSVIVIG G++G+AAAR L +ASF+V +
Sbjct: 21 MQKQNNVQPSVIVIGSGISGLAAARNLSEASFKVTV 56
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 438,227,126
Number of Sequences: 1393205
Number of extensions: 9674477
Number of successful extensions: 36831
Number of sequences better than 10.0: 189
Number of HSP's better than 10.0 without gapping: 34973
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36770
length of database: 448,689,247
effective HSP length: 112
effective length of database: 292,650,287
effective search space used: 12291312054
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
