Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC018741A_C01 KMC018741A_c01
(587 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_201409.1| protein phosphatase 2C-like protein; protein id... 182 4e-45
ref|NP_195896.1| protein phosphatase - like protein; protein id:... 180 1e-44
dbj|BAB02253.1| protein phosphatase 2C [Arabidopsis thaliana] gi... 178 4e-44
ref|NP_187868.1| protein phosphatase 2C, putative; protein id: A... 178 4e-44
pir||T45768 protein phosphatase 2C-like protein - Arabidopsis th... 176 1e-43
>ref|NP_201409.1| protein phosphatase 2C-like protein; protein id: At5g66080.1,
supported by cDNA: gi_17065021 [Arabidopsis thaliana]
gi|10177123|dbj|BAB10413.1| protein phosphatase 2C-like
protein [Arabidopsis thaliana]
gi|17065022|gb|AAL32665.1| protein phosphatase 2C-like
protein [Arabidopsis thaliana]
gi|24899803|gb|AAN65116.1| protein phosphatase 2C-like
protein [Arabidopsis thaliana]
Length = 385
Score = 182 bits (461), Expect = 4e-45
Identities = 93/126 (73%), Positives = 105/126 (82%), Gaps = 1/126 (0%)
Frame = -1
Query: 578 KFRLPETFFKPILSWEPSITTHKLHSNDQFLIFASDGLWEQLSNQEAVNIVSNNPRNGIA 399
K+RL E +PILSWEPSIT H L +DQFLIFASDGLWEQLSNQEAV IV N+PRNGIA
Sbjct: 253 KYRLREPMKRPILSWEPSITVHDLQPDDQFLIFASDGLWEQLSNQEAVEIVQNHPRNGIA 312
Query: 398 RRLVKAALREAAKKREMRVSDLQKIEQGVRRHFHDDITVIVVFLNPKLIDNNSLWGSP-L 222
RRLVKAAL+EAAKKREMR SDL KIE+GVRRHFHDDITV+V+FL+ L+ S +P +
Sbjct: 313 RRLVKAALQEAAKKREMRYSDLNKIERGVRRHFHDDITVVVLFLDTNLLSRASSLKTPSV 372
Query: 221 SIRGGG 204
SIRGGG
Sbjct: 373 SIRGGG 378
>ref|NP_195896.1| protein phosphatase - like protein; protein id: At5g02760.1
[Arabidopsis thaliana] gi|11282005|pir||T48297 protein
phosphatase-like protein - Arabidopsis thaliana
gi|7413551|emb|CAB86030.1| protein phosphatase-like
protein [Arabidopsis thaliana]
Length = 361
Score = 180 bits (457), Expect = 1e-44
Identities = 92/129 (71%), Positives = 105/129 (81%)
Frame = -1
Query: 578 KFRLPETFFKPILSWEPSITTHKLHSNDQFLIFASDGLWEQLSNQEAVNIVSNNPRNGIA 399
KFRLPE F KPILS +PS+T +L D+F+I ASDGLWE LSNQEAV+IV N+PR GIA
Sbjct: 232 KFRLPEHFTKPILSADPSVTITRLSPQDEFIILASDGLWEHLSNQEAVDIVHNSPRQGIA 291
Query: 398 RRLVKAALREAAKKREMRVSDLQKIEQGVRRHFHDDITVIVVFLNPKLIDNNSLWGSPLS 219
RRL+KAAL+EAAKKREMR SDL +I GVRRHFHDDITVIVV+LNP + NS W SPLS
Sbjct: 292 RRLLKAALKEAAKKREMRYSDLTEIHPGVRRHFHDDITVIVVYLNPHPVKTNS-WASPLS 350
Query: 218 IRGGGPANS 192
IRGG P +S
Sbjct: 351 IRGGYPMHS 359
>dbj|BAB02253.1| protein phosphatase 2C [Arabidopsis thaliana]
gi|28466963|gb|AAO44090.1| At3g12620 [Arabidopsis
thaliana]
Length = 385
Score = 178 bits (452), Expect = 4e-44
Identities = 89/125 (71%), Positives = 103/125 (82%)
Frame = -1
Query: 578 KFRLPETFFKPILSWEPSITTHKLHSNDQFLIFASDGLWEQLSNQEAVNIVSNNPRNGIA 399
KFR+PE F KPIL EP+IT HK+H DQFLIFASDGLWE LSNQEAV+IV+ PRNGIA
Sbjct: 254 KFRVPEVFHKPILRAEPAITVHKIHPEDQFLIFASDGLWEHLSNQEAVDIVNTCPRNGIA 313
Query: 398 RRLVKAALREAAKKREMRVSDLQKIEQGVRRHFHDDITVIVVFLNPKLIDNNSLWGSPLS 219
R+L+K ALREAAKKREMR SDL+KI++GVRRHFHDDITVIVVFL+ L+ ++ LS
Sbjct: 314 RKLIKTALREAAKKREMRYSDLKKIDRGVRRHFHDDITVIVVFLDSHLVSRSTSRRPLLS 373
Query: 218 IRGGG 204
I GGG
Sbjct: 374 ISGGG 378
>ref|NP_187868.1| protein phosphatase 2C, putative; protein id: At3g12620.1
[Arabidopsis thaliana]
gi|12321955|gb|AAG51012.1|AC069474_11 protein
phosphatase 2C, putative; 16828-18284 [Arabidopsis
thaliana]
Length = 376
Score = 178 bits (452), Expect = 4e-44
Identities = 89/125 (71%), Positives = 103/125 (82%)
Frame = -1
Query: 578 KFRLPETFFKPILSWEPSITTHKLHSNDQFLIFASDGLWEQLSNQEAVNIVSNNPRNGIA 399
KFR+PE F KPIL EP+IT HK+H DQFLIFASDGLWE LSNQEAV+IV+ PRNGIA
Sbjct: 245 KFRVPEVFHKPILRAEPAITVHKIHPEDQFLIFASDGLWEHLSNQEAVDIVNTCPRNGIA 304
Query: 398 RRLVKAALREAAKKREMRVSDLQKIEQGVRRHFHDDITVIVVFLNPKLIDNNSLWGSPLS 219
R+L+K ALREAAKKREMR SDL+KI++GVRRHFHDDITVIVVFL+ L+ ++ LS
Sbjct: 305 RKLIKTALREAAKKREMRYSDLKKIDRGVRRHFHDDITVIVVFLDSHLVSRSTSRRPLLS 364
Query: 218 IRGGG 204
I GGG
Sbjct: 365 ISGGG 369
>pir||T45768 protein phosphatase 2C-like protein - Arabidopsis thaliana
gi|6572058|emb|CAB63001.1| protein phosphatase 2C-like
protein [Arabidopsis thaliana]
Length = 379
Score = 176 bits (447), Expect = 1e-43
Identities = 87/125 (69%), Positives = 107/125 (85%)
Frame = -1
Query: 578 KFRLPETFFKPILSWEPSITTHKLHSNDQFLIFASDGLWEQLSNQEAVNIVSNNPRNGIA 399
K+R+ E F +PILS EP+IT H++ D+FLIFASDGLWEQ+SNQEAV+IV N+PRNGIA
Sbjct: 250 KYRIREPFKRPILSGEPTITEHEIQPQDKFLIFASDGLWEQMSNQEAVDIVQNHPRNGIA 309
Query: 398 RRLVKAALREAAKKREMRVSDLQKIEQGVRRHFHDDITVIVVFLNPKLIDNNSLWGSPLS 219
RRLVK AL+EAAKKREMR SDL+KIE+GVRRHFHDDITV+++FL+ + +S+ G PLS
Sbjct: 310 RRLVKMALQEAAKKREMRYSDLKKIERGVRRHFHDDITVVIIFLDTNQV--SSVKGPPLS 367
Query: 218 IRGGG 204
IRGGG
Sbjct: 368 IRGGG 372
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 458,265,785
Number of Sequences: 1393205
Number of extensions: 9418494
Number of successful extensions: 27558
Number of sequences better than 10.0: 352
Number of HSP's better than 10.0 without gapping: 26828
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27521
length of database: 448,689,247
effective HSP length: 117
effective length of database: 285,684,262
effective search space used: 22283372436
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
