Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC018660A_C01 KMC018660A_c01
(587 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAC05449.1| SIR2-family protein [Arabidopsis thaliana] 73 2e-12
ref|NP_568207.1| SIR2-family protein; protein id: At5g09230.1, s... 73 2e-12
gb|AAB95634.1| unknown function; 60% similar to Z50177 (PID:g927... 39 0.049
ref|NP_036372.1| sirtuin 4; sirtuin (silent mating type informat... 39 0.049
ref|NP_572241.2| CG3187-PC [Drosophila melanogaster] gi|28381562... 37 0.14
>emb|CAC05449.1| SIR2-family protein [Arabidopsis thaliana]
Length = 451
Score = 73.2 bits (178), Expect = 2e-12
Identities = 35/46 (76%), Positives = 41/46 (89%)
Frame = -2
Query: 586 EAGAATAIVNVGVTRADDFVPLKINARLGEILPRVLDMGSISIPVV 449
EAGA TAIVN+G TRADD VPLKINAR+GEIL RVLD+GS+S+P +
Sbjct: 406 EAGAMTAIVNIGETRADDIVPLKINARVGEILHRVLDVGSLSVPAL 451
>ref|NP_568207.1| SIR2-family protein; protein id: At5g09230.1, supported by cDNA:
gi_15028032 [Arabidopsis thaliana]
gi|15028033|gb|AAK76547.1| putative SIR2-family protein
[Arabidopsis thaliana] gi|21689769|gb|AAM67528.1|
putative SIR2-family protein [Arabidopsis thaliana]
Length = 373
Score = 73.2 bits (178), Expect = 2e-12
Identities = 35/46 (76%), Positives = 41/46 (89%)
Frame = -2
Query: 586 EAGAATAIVNVGVTRADDFVPLKINARLGEILPRVLDMGSISIPVV 449
EAGA TAIVN+G TRADD VPLKINAR+GEIL RVLD+GS+S+P +
Sbjct: 328 EAGAMTAIVNIGETRADDIVPLKINARVGEILHRVLDVGSLSVPAL 373
>gb|AAB95634.1| unknown function; 60% similar to Z50177 (PID:g927403) (PID:g927402)
[Homo sapiens]
Length = 326
Score = 38.9 bits (89), Expect = 0.049
Identities = 16/29 (55%), Positives = 23/29 (79%)
Frame = -2
Query: 568 AIVNVGVTRADDFVPLKINARLGEILPRV 482
AI+N+G TR+DD LK+N+R GE+LP +
Sbjct: 295 AILNIGPTRSDDLACLKLNSRCGELLPLI 323
>ref|NP_036372.1| sirtuin 4; sirtuin (silent mating type information regulation 2, S.
cerevisiae, homolog) 4; sirtuin type 4; silent mating
type information regulation 2, S. cerevisiae, homolog 4;
sir2-like 4 [Homo sapiens]
gi|5225324|gb|AAD40852.1|AF083109_1 sirtuin type 4 [Homo
sapiens]
Length = 314
Score = 38.9 bits (89), Expect = 0.049
Identities = 16/29 (55%), Positives = 23/29 (79%)
Frame = -2
Query: 568 AIVNVGVTRADDFVPLKINARLGEILPRV 482
AI+N+G TR+DD LK+N+R GE+LP +
Sbjct: 283 AILNIGPTRSDDLACLKLNSRCGELLPLI 311
>ref|NP_572241.2| CG3187-PC [Drosophila melanogaster] gi|28381562|gb|AAN09146.2|
CG3187-PC [Drosophila melanogaster]
Length = 312
Score = 37.4 bits (85), Expect = 0.14
Identities = 14/30 (46%), Positives = 23/30 (76%)
Frame = -2
Query: 565 IVNVGVTRADDFVPLKINARLGEILPRVLD 476
IVN+G TRAD +KI+A+ G+++P++ D
Sbjct: 275 IVNIGETRADHLADIKISAKCGDVIPKLFD 304
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 470,970,312
Number of Sequences: 1393205
Number of extensions: 9800774
Number of successful extensions: 23807
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 22620
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23713
length of database: 448,689,247
effective HSP length: 117
effective length of database: 285,684,262
effective search space used: 22283372436
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
