Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC018526A_C01 KMC018526A_c01
(556 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|P36908|CHIA_CICAR ACIDIC ENDOCHITINASE PRECURSOR gi|322686|pi... 223 1e-57
emb|CAA76203.1| class III chitinase [Lupinus albus] 213 1e-54
emb|CAB43737.2| chitinase [Trifolium repens] 210 1e-53
dbj|BAA77676.1| acidic chitinase [Glycine max] 205 3e-52
sp|P29024|CHIA_PHAAN Acidic endochitinase precursor 201 4e-51
>sp|P36908|CHIA_CICAR ACIDIC ENDOCHITINASE PRECURSOR gi|322686|pir||S31763 chitinase (EC
3.2.1.14) class III, acidic - chickpea
gi|17942|emb|CAA49998.1| chitinase [Cicer arietinum]
Length = 293
Score = 223 bits (568), Expect = 1e-57
Identities = 104/139 (74%), Positives = 120/139 (85%), Gaps = 3/139 (2%)
Frame = -1
Query: 556 FDELARALK---QHNVILAAAPQCPYPDAHLDSAIKTGLFDHVWVQFYNNPQCQYSRGNT 386
+DELA+AL Q V L+AAPQCPYPDAHLDSAI+TGLFD+VWVQFYNNPQCQYS GN
Sbjct: 156 YDELAKALNGFSQQKVYLSAAPQCPYPDAHLDSAIQTGLFDYVWVQFYNNPQCQYSNGNI 215
Query: 385 NNLLNSWKQWTDVSEIKQVFLGLPASEGAAPSGGFVPADVLNSQVLPSVKSSPKYGGVML 206
NNL+N+W QWT S+ KQVFLG+PAS+ AAPSGG +PADVL SQVLP++K+SPKYGGVM+
Sbjct: 216 NNLVNAWNQWTS-SQAKQVFLGVPASDAAAPSGGLIPADVLTSQVLPAIKTSPKYGGVMI 274
Query: 205 WDRFNDGPNGYSTAIKGSV 149
WDRFND +GYS AIKGSV
Sbjct: 275 WDRFNDAQSGYSNAIKGSV 293
>emb|CAA76203.1| class III chitinase [Lupinus albus]
Length = 293
Score = 213 bits (543), Expect = 1e-54
Identities = 104/140 (74%), Positives = 115/140 (81%), Gaps = 4/140 (2%)
Frame = -1
Query: 556 FDELARALK----QHNVILAAAPQCPYPDAHLDSAIKTGLFDHVWVQFYNNPQCQYSRGN 389
+DELARAL Q V L AAPQCP PDAHLD+AI TGLFD+VWVQFYNNPQCQY+ GN
Sbjct: 155 YDELARALNGFSSQKKVYLGAAPQCPIPDAHLDAAINTGLFDYVWVQFYNNPQCQYACGN 214
Query: 388 TNNLLNSWKQWTDVSEIKQVFLGLPASEGAAPSGGFVPADVLNSQVLPSVKSSPKYGGVM 209
TNNL+NSW QWT S+ KQVFLGLPASE AAPSGGF+P DVL SQVLP++K+SPKYGGVM
Sbjct: 215 TNNLINSWNQWTS-SQAKQVFLGLPASEAAAPSGGFIPTDVLISQVLPTIKTSPKYGGVM 273
Query: 208 LWDRFNDGPNGYSTAIKGSV 149
LW+ FND GYS AIK SV
Sbjct: 274 LWNGFNDIQTGYSDAIKASV 293
>emb|CAB43737.2| chitinase [Trifolium repens]
Length = 298
Score = 210 bits (534), Expect = 1e-53
Identities = 102/142 (71%), Positives = 118/142 (82%), Gaps = 6/142 (4%)
Frame = -1
Query: 556 FDELARALK------QHNVILAAAPQCPYPDAHLDSAIKTGLFDHVWVQFYNNPQCQYSR 395
FDELA+AL Q + L+AAPQCPYPDAHLDSAI TGLFD+V VQFYNNPQ QYS
Sbjct: 158 FDELAKALNGFSSQSQKQIYLSAAPQCPYPDAHLDSAIPTGLFDYVGVQFYNNPQRQYSN 217
Query: 394 GNTNNLLNSWKQWTDVSEIKQVFLGLPASEGAAPSGGFVPADVLNSQVLPSVKSSPKYGG 215
GNT NL+N+W QWT S+ QVFLG+PA+EGAAPSGGF+P+DVL +QVLP++KSS KYGG
Sbjct: 218 GNTANLVNAWNQWTS-SQATQVFLGVPANEGAAPSGGFIPSDVLINQVLPAIKSSAKYGG 276
Query: 214 VMLWDRFNDGPNGYSTAIKGSV 149
VM+WDRFNDG +GYS AIKGSV
Sbjct: 277 VMIWDRFNDGQSGYSDAIKGSV 298
>dbj|BAA77676.1| acidic chitinase [Glycine max]
Length = 298
Score = 205 bits (522), Expect = 3e-52
Identities = 101/140 (72%), Positives = 111/140 (79%), Gaps = 4/140 (2%)
Frame = -1
Query: 556 FDELARALK----QHNVILAAAPQCPYPDAHLDSAIKTGLFDHVWVQFYNNPQCQYSRGN 389
+D+LARAL Q V L+AAPQC PDAHLD AI+TGLFD+VWVQFYNNP CQYS GN
Sbjct: 159 YDDLARALNSFSSQRKVYLSAAPQCIIPDAHLDRAIQTGLFDYVWVQFYNNPSCQYSSGN 218
Query: 388 TNNLLNSWKQWTDVSEIKQVFLGLPASEGAAPSGGFVPADVLNSQVLPSVKSSPKYGGVM 209
TNNL+NSW QW V Q+F+GLPASE AAPSGGFVPADVL SQVLP +K S KYGGVM
Sbjct: 219 TNNLINSWNQWITV-PASQIFMGLPASEAAAPSGGFVPADVLTSQVLPVIKQSSKYGGVM 277
Query: 208 LWDRFNDGPNGYSTAIKGSV 149
LW+RFND NGYS AI GSV
Sbjct: 278 LWNRFNDVQNGYSNAIIGSV 297
>sp|P29024|CHIA_PHAAN Acidic endochitinase precursor
Length = 298
Score = 201 bits (512), Expect = 4e-51
Identities = 100/138 (72%), Positives = 115/138 (82%), Gaps = 2/138 (1%)
Frame = -1
Query: 556 FDELARALKQHN--VILAAAPQCPYPDAHLDSAIKTGLFDHVWVQFYNNPQCQYSRGNTN 383
+D+LARALK N ++L AAPQCP PDAHLD+AIKTGLFD VWVQFYNNP CQYS GNTN
Sbjct: 163 WDDLARALKGFNSQLLLTAAPQCPIPDAHLDTAIKTGLFDIVWVQFYNNPPCQYSSGNTN 222
Query: 382 NLLNSWKQWTDVSEIKQVFLGLPASEGAAPSGGFVPADVLNSQVLPSVKSSPKYGGVMLW 203
+L++SW QWT S+ KQ+FLG+PAS AA S GF+PADVL SQVLP++K S KYGGVMLW
Sbjct: 223 DLISSWNQWTS-SQAKQLFLGVPASTAAAGS-GFIPADVLTSQVLPTIKGSSKYGGVMLW 280
Query: 202 DRFNDGPNGYSTAIKGSV 149
DRFNDG +GYS AI GSV
Sbjct: 281 DRFNDGQSGYSGAIIGSV 298
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 449,478,369
Number of Sequences: 1393205
Number of extensions: 9369044
Number of successful extensions: 25157
Number of sequences better than 10.0: 150
Number of HSP's better than 10.0 without gapping: 23829
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24968
length of database: 448,689,247
effective HSP length: 116
effective length of database: 287,077,467
effective search space used: 19521267756
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
