Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC018517A_C01 KMC018517A_c01
(588 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|Q96452|143C_SOYBN 14-3-3-LIKE PROTEIN C (SGF14C) gi|7435034|p... 130 1e-31
gb|AAF76227.1|AF272573_1 14-3-3 protein [Populus x canescens] 123 3e-29
gb|AAD27824.2| 14-3-3 protein [Populus x canescens] 122 3e-29
dbj|BAB17822.1| vf14-3-3d protein [Vicia faba] 122 4e-29
gb|AAF27931.1|AF222805_1 14-3-3-like protein [Euphorbia esula] 121 7e-29
>sp|Q96452|143C_SOYBN 14-3-3-LIKE PROTEIN C (SGF14C) gi|7435034|pir||T08843 14-3-3
protein homolog SGF14C - soybean
gi|1575729|gb|AAB09582.1| SGF14C [Glycine max]
Length = 258
Score = 130 bits (328), Expect(2) = 1e-31
Identities = 64/71 (90%), Positives = 68/71 (95%)
Frame = -2
Query: 530 LNSPERACHLAKQAFDEAISELDTLSEESYKDSTLIMQLLRDNLTLWTSDIPEEGGEEKV 351
LNSPERACHLAKQAFDEAISELDTLSEESYKDSTLIMQLLRDNLTLWTSDIPE+G E+KV
Sbjct: 188 LNSPERACHLAKQAFDEAISELDTLSEESYKDSTLIMQLLRDNLTLWTSDIPEDGEEQKV 247
Query: 350 ESARAPAGEDA 318
+SARA G+DA
Sbjct: 248 DSARADGGDDA 258
Score = 27.7 bits (60), Expect(2) = 1e-31
Identities = 14/20 (70%), Positives = 15/20 (75%), Gaps = 2/20 (10%)
Frame = -3
Query: 583 SSHSI--GLGLTFSVFYYEI 530
S+H I GL L FSVFYYEI
Sbjct: 168 STHPIRLGLALNFSVFYYEI 187
>gb|AAF76227.1|AF272573_1 14-3-3 protein [Populus x canescens]
Length = 260
Score = 123 bits (308), Expect(2) = 3e-29
Identities = 62/72 (86%), Positives = 67/72 (92%), Gaps = 1/72 (1%)
Frame = -2
Query: 530 LNSPERACHLAKQAFDEAISELDTLSEESYKDSTLIMQLLRDNLTLWTSDIPEEGGEEKV 351
+NSPERACHLAKQAFDEAISELDTLSEESYKDSTLIMQLLRDNLTLWTSDIPE+G ++K+
Sbjct: 188 MNSPERACHLAKQAFDEAISELDTLSEESYKDSTLIMQLLRDNLTLWTSDIPEDGEDQKM 247
Query: 350 E-SARAPAGEDA 318
E SAR GEDA
Sbjct: 248 ETSARTGEGEDA 259
Score = 27.3 bits (59), Expect(2) = 3e-29
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = -3
Query: 571 IGLGLTFSVFYYEI 530
+GL L FSVFYYEI
Sbjct: 174 LGLALNFSVFYYEI 187
>gb|AAD27824.2| 14-3-3 protein [Populus x canescens]
Length = 260
Score = 122 bits (307), Expect(2) = 3e-29
Identities = 61/72 (84%), Positives = 68/72 (93%), Gaps = 1/72 (1%)
Frame = -2
Query: 530 LNSPERACHLAKQAFDEAISELDTLSEESYKDSTLIMQLLRDNLTLWTSDIPEEGGEEKV 351
+NSPERACHLAKQ+FDEAISELDTLSEESYKDSTLIMQLLRDNLTLWTSDIPE+G ++K+
Sbjct: 188 MNSPERACHLAKQSFDEAISELDTLSEESYKDSTLIMQLLRDNLTLWTSDIPEDGEDQKM 247
Query: 350 E-SARAPAGEDA 318
E SA+A GEDA
Sbjct: 248 ETSAKAGGGEDA 259
Score = 27.3 bits (59), Expect(2) = 3e-29
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = -3
Query: 571 IGLGLTFSVFYYEI 530
+GL L FSVFYYEI
Sbjct: 174 LGLALNFSVFYYEI 187
>dbj|BAB17822.1| vf14-3-3d protein [Vicia faba]
Length = 257
Score = 122 bits (306), Expect(2) = 4e-29
Identities = 62/72 (86%), Positives = 67/72 (92%), Gaps = 1/72 (1%)
Frame = -2
Query: 530 LNSPERACHLAKQAFDEAISELDTLSEESYKDSTLIMQLLRDNLTLWTSDIPEEGGEE-K 354
LNSPERACHLAKQAFD AI+ELD+L+EESYKDSTLIMQLLRDNLTLWTSDIPEEG EE K
Sbjct: 185 LNSPERACHLAKQAFDVAIAELDSLNEESYKDSTLIMQLLRDNLTLWTSDIPEEGVEEQK 244
Query: 353 VESARAPAGEDA 318
ESARAP G++A
Sbjct: 245 AESARAPVGDNA 256
Score = 27.3 bits (59), Expect(2) = 4e-29
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = -3
Query: 571 IGLGLTFSVFYYEI 530
+GL L FSVFYYEI
Sbjct: 171 LGLALNFSVFYYEI 184
>gb|AAF27931.1|AF222805_1 14-3-3-like protein [Euphorbia esula]
Length = 259
Score = 121 bits (304), Expect(2) = 7e-29
Identities = 59/71 (83%), Positives = 64/71 (90%)
Frame = -2
Query: 530 LNSPERACHLAKQAFDEAISELDTLSEESYKDSTLIMQLLRDNLTLWTSDIPEEGGEEKV 351
+NSPERACHLAKQAFDEAISELDTLSEESYKDSTLIMQLLRDNLTLWTSDIPE+G ++
Sbjct: 188 MNSPERACHLAKQAFDEAISELDTLSEESYKDSTLIMQLLRDNLTLWTSDIPEDGDQKME 247
Query: 350 ESARAPAGEDA 318
S +A GEDA
Sbjct: 248 TSGKASGGEDA 258
Score = 27.3 bits (59), Expect(2) = 7e-29
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = -3
Query: 571 IGLGLTFSVFYYEI 530
+GL L FSVFYYEI
Sbjct: 174 LGLALNFSVFYYEI 187
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 495,687,579
Number of Sequences: 1393205
Number of extensions: 10596710
Number of successful extensions: 27852
Number of sequences better than 10.0: 304
Number of HSP's better than 10.0 without gapping: 26128
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27749
length of database: 448,689,247
effective HSP length: 117
effective length of database: 285,684,262
effective search space used: 22283372436
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
