Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC018470A_C01 KMC018470A_c01
(510 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_564365.1| expressed protein; protein id: At1g30840.1, sup... 97 8e-20
dbj|BAB90042.1| putative purine permease [Oryza sativa (japonica... 84 1e-15
ref|NP_175096.1| hypothetical protein; protein id: At1g44750.1, ... 51 9e-06
ref|NP_174143.1| purine permease, putative; protein id: At1g2822... 50 2e-05
gb|AAN64138.1| Hypothetical protein [Oryza sativa (japonica cult... 49 4e-05
>ref|NP_564365.1| expressed protein; protein id: At1g30840.1, supported by cDNA:
113990. [Arabidopsis thaliana]
gi|4926830|gb|AAD32940.1|AC004135_15 T17H7.15
[Arabidopsis thaliana] gi|21536872|gb|AAM61204.1|
unknown [Arabidopsis thaliana]
gi|28393519|gb|AAO42180.1| unknown protein [Arabidopsis
thaliana] gi|28973181|gb|AAO63915.1| unknown protein
[Arabidopsis thaliana]
Length = 382
Score = 97.4 bits (241), Expect = 8e-20
Identities = 43/64 (67%), Positives = 53/64 (82%)
Frame = -2
Query: 509 GMVFMTSSLTRGICATPLLSMNVLGGVVVYRDAFGGLKAVSTVLCIWGFCSYVFGLYVKM 330
GMV++TS +T GIC T LL+MNV+GGVV Y D FGG+K VSTVLCIWGF SY +G+Y+KM
Sbjct: 283 GMVYLTSGITGGICMTALLAMNVIGGVVAYGDVFGGVKIVSTVLCIWGFSSYTYGMYMKM 342
Query: 329 VKEK 318
KE+
Sbjct: 343 KKEE 346
>dbj|BAB90042.1| putative purine permease [Oryza sativa (japonica cultivar-group)]
gi|21644687|dbj|BAC01243.1| putative purine permease
[Oryza sativa (japonica cultivar-group)]
Length = 372
Score = 83.6 bits (205), Expect = 1e-15
Identities = 37/62 (59%), Positives = 48/62 (76%)
Frame = -2
Query: 509 GMVFMTSSLTRGICATPLLSMNVLGGVVVYRDAFGGLKAVSTVLCIWGFCSYVFGLYVKM 330
GMV++TSSL G+C T +L+ NV+GGVVV+RD FG KAV+TVLC+WGF SY++G Y
Sbjct: 273 GMVYLTSSLHSGVCMTAVLTANVIGGVVVFRDPFGADKAVATVLCVWGFSSYLYGEYTTQ 332
Query: 329 VK 324
K
Sbjct: 333 KK 334
>ref|NP_175096.1| hypothetical protein; protein id: At1g44750.1, supported by cDNA:
gi_17065411 [Arabidopsis thaliana]
gi|25350216|pir||D96506 hypothetical protein T12C22.2
[imported] - Arabidopsis thaliana
gi|8655985|gb|AAF78258.1|AC020576_2 Contains similarity
to purine permease from Arabidopsis thaliana
gb|AF078531. EST gb|AI997301 comes from this gene
gi|17065412|gb|AAL32860.1| Unknown protein [Arabidopsis
thaliana] gi|28058999|gb|AAO29976.1| Unknown protein
[Arabidopsis thaliana]
Length = 379
Score = 50.8 bits (120), Expect = 9e-06
Identities = 21/62 (33%), Positives = 40/62 (63%)
Frame = -2
Query: 509 GMVFMTSSLTRGICATPLLSMNVLGGVVVYRDAFGGLKAVSTVLCIWGFCSYVFGLYVKM 330
G++F+ +SL + +T L++ L +VV+RD G+K ++ ++ IWGF SYV+ ++
Sbjct: 301 GLIFLVTSLFSNVISTLSLAVTPLAALVVFRDKMSGVKIMAMLIAIWGFASYVYQNHIDD 360
Query: 329 VK 324
+K
Sbjct: 361 LK 362
>ref|NP_174143.1| purine permease, putative; protein id: At1g28220.1 [Arabidopsis
thaliana] gi|25350220|pir||C86408 F3H9.12 protein -
Arabidopsis thaliana
gi|9795615|gb|AAF98433.1|AC021044_12 Similar to purine
permease [Arabidopsis thaliana]
Length = 351
Score = 50.1 bits (118), Expect = 2e-05
Identities = 26/72 (36%), Positives = 41/72 (56%)
Frame = -2
Query: 509 GMVFMTSSLTRGICATPLLSMNVLGGVVVYRDAFGGLKAVSTVLCIWGFCSYVFGLYVKM 330
G++F TSSL GI + LL + + V+ Y + F K +S L +WGF SY +G +K
Sbjct: 266 GLIFSTSSLVSGIMISVLLPITEVLAVIFYHEKFQAEKGLSLALSLWGFVSYFYG-EIKS 324
Query: 329 VKEKARMMRNYS 294
++K R+ + S
Sbjct: 325 GEDKRRIQQEES 336
>gb|AAN64138.1| Hypothetical protein [Oryza sativa (japonica cultivar-group)]
Length = 399
Score = 48.5 bits (114), Expect = 4e-05
Identities = 23/67 (34%), Positives = 37/67 (54%)
Frame = -2
Query: 509 GMVFMTSSLTRGICATPLLSMNVLGGVVVYRDAFGGLKAVSTVLCIWGFCSYVFGLYVKM 330
G++ SSL GI LL ++ + V+ + F G K ++ VL +WGF SY++G +
Sbjct: 312 GLITCASSLLAGIMIAVLLPLSQVLAVIFLHEKFDGTKGIALVLSLWGFASYLYGEKAQK 371
Query: 329 VKEKARM 309
KE +M
Sbjct: 372 KKEAQKM 378
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 426,942,992
Number of Sequences: 1393205
Number of extensions: 9012988
Number of successful extensions: 17031
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 16464
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17016
length of database: 448,689,247
effective HSP length: 114
effective length of database: 289,863,877
effective search space used: 15942513235
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
