Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC018461A_C01 KMC018461A_c01
(552 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAO00719.1| putative mandelonitrile lyase [Oryza sativa (japo... 152 3e-36
pir||T50698 probable mandelonitrile lyase (EC 4.1.2.10) [importe... 151 4e-36
ref|NP_567032.1| mandelonitrile lyase-like protein; protein id: ... 151 6e-36
gb|AAN60330.1| unknown [Arabidopsis thaliana] 151 6e-36
ref|NP_200008.1| mandelonitrile lyase-like protein; protein id: ... 147 1e-34
>gb|AAO00719.1| putative mandelonitrile lyase [Oryza sativa (japonica
cultivar-group)]
Length = 586
Score = 152 bits (383), Expect = 3e-36
Identities = 72/102 (70%), Positives = 77/102 (74%)
Frame = -1
Query: 552 YNTMPVSMLLNITANSPVNLLPKHANSSMSLEQFCKDTVMTIWHYHGGCQVGRVVDTDYK 373
Y V + +AN PVNLLP+H N S S EQ+C DTVMTIWHYHGGC VG VVD DY+
Sbjct: 482 YANASVESIFTDSANFPVNLLPRHVNDSRSPEQYCMDTVMTIWHYHGGCHVGAVVDDDYR 541
Query: 372 VLGVDALRVIDGSTFNYSPGTNPQATVMMLGRYMGVKILRER 247
V GV LRVID STF YSPGTNPQATVMMLGRYMGVKI ER
Sbjct: 542 VFGVQGLRVIDSSTFKYSPGTNPQATVMMLGRYMGVKIQSER 583
>pir||T50698 probable mandelonitrile lyase (EC 4.1.2.10) [imported] - rice
gi|7649261|gb|AAF65820.1|AF251031_1 putative
mandelonitrile lyase [Oryza sativa]
Length = 589
Score = 151 bits (382), Expect = 4e-36
Identities = 72/102 (70%), Positives = 77/102 (74%)
Frame = -1
Query: 552 YNTMPVSMLLNITANSPVNLLPKHANSSMSLEQFCKDTVMTIWHYHGGCQVGRVVDTDYK 373
Y V + +AN PVNLLP+H N S S EQ+C DTVMTIWHYHGGC VG VVD DY+
Sbjct: 485 YANASVESIFTDSANFPVNLLPRHVNDSRSPEQYCMDTVMTIWHYHGGCHVGAVVDDDYR 544
Query: 372 VLGVDALRVIDGSTFNYSPGTNPQATVMMLGRYMGVKILRER 247
V GV LRVID STF YSPGTNPQATVMMLGRYMGVKI ER
Sbjct: 545 VFGVHGLRVIDSSTFKYSPGTNPQATVMMLGRYMGVKIQSER 586
>ref|NP_567032.1| mandelonitrile lyase-like protein; protein id: At3g56060.1,
supported by cDNA: gi_15982754 [Arabidopsis thaliana]
gi|15982755|gb|AAL09718.1| AT3g56060/F18O21_20
[Arabidopsis thaliana]
Length = 577
Score = 151 bits (381), Expect = 6e-36
Identities = 71/96 (73%), Positives = 81/96 (83%)
Frame = -1
Query: 528 LLNITANSPVNLLPKHANSSMSLEQFCKDTVMTIWHYHGGCQVGRVVDTDYKVLGVDALR 349
LLN+ P NL P+H S+ LEQ+C DTVMTI+HYHGGCQVG+VVD +YKVLGVDALR
Sbjct: 474 LLNLILALPTNLRPRHITSTFDLEQYCIDTVMTIYHYHGGCQVGKVVDNNYKVLGVDALR 533
Query: 348 VIDGSTFNYSPGTNPQATVMMLGRYMGVKILRERLA 241
+IDGSTF SPGTNPQAT+MMLGRYMG KILRER+A
Sbjct: 534 IIDGSTFLKSPGTNPQATIMMLGRYMGQKILRERMA 569
>gb|AAN60330.1| unknown [Arabidopsis thaliana]
Length = 475
Score = 151 bits (381), Expect = 6e-36
Identities = 71/96 (73%), Positives = 81/96 (83%)
Frame = -1
Query: 528 LLNITANSPVNLLPKHANSSMSLEQFCKDTVMTIWHYHGGCQVGRVVDTDYKVLGVDALR 349
LLN+ P NL P+H S+ LEQ+C DTVMTI+HYHGGCQVG+VVD +YKVLGVDALR
Sbjct: 372 LLNLILALPTNLRPRHITSTFDLEQYCIDTVMTIYHYHGGCQVGKVVDNNYKVLGVDALR 431
Query: 348 VIDGSTFNYSPGTNPQATVMMLGRYMGVKILRERLA 241
+IDGSTF SPGTNPQAT+MMLGRYMG KILRER+A
Sbjct: 432 IIDGSTFLKSPGTNPQATIMMLGRYMGQKILRERMA 467
>ref|NP_200008.1| mandelonitrile lyase-like protein; protein id: At5g51950.1,
supported by cDNA: gi_14194160 [Arabidopsis thaliana]
gi|14194161|gb|AAK56275.1|AF367287_1 AT5g51950/MSG15_3
[Arabidopsis thaliana]
Length = 586
Score = 147 bits (370), Expect = 1e-34
Identities = 69/102 (67%), Positives = 81/102 (78%)
Frame = -1
Query: 552 YNTMPVSMLLNITANSPVNLLPKHANSSMSLEQFCKDTVMTIWHYHGGCQVGRVVDTDYK 373
Y + LL++ + P NL P+H S +L QFC DTVMTIWHYHGGCQVGRVVD +Y+
Sbjct: 475 YPDATIHGLLDLMLSVPTNLRPRHITSMFNLRQFCIDTVMTIWHYHGGCQVGRVVDKNYR 534
Query: 372 VLGVDALRVIDGSTFNYSPGTNPQATVMMLGRYMGVKILRER 247
VLG+D+LRVIDGSTF SPGTNPQATVMMLGRYMG +IL+ER
Sbjct: 535 VLGIDSLRVIDGSTFLKSPGTNPQATVMMLGRYMGQRILQER 576
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 431,302,537
Number of Sequences: 1393205
Number of extensions: 8558296
Number of successful extensions: 21706
Number of sequences better than 10.0: 231
Number of HSP's better than 10.0 without gapping: 21106
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21676
length of database: 448,689,247
effective HSP length: 116
effective length of database: 287,077,467
effective search space used: 19234190289
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
