Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC018453A_C01 KMC018453A_c01
(595 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAO53181.1| hypothetical protein [Dictyostelium discoideum] 34 1.6
ref|XP_219511.1| similar to CG2839-PA [Drosophila melanogaster] ... 33 3.6
ref|NP_635638.1| dipeptidyl anminopeptidase [Xanthomonas campest... 32 4.7
>gb|AAO53181.1| hypothetical protein [Dictyostelium discoideum]
Length = 145
Score = 33.9 bits (76), Expect = 1.6
Identities = 20/61 (32%), Positives = 29/61 (46%), Gaps = 3/61 (4%)
Frame = +1
Query: 391 MNCCTIVKDFCRGG---FDKRSSLCGSRGPSTTTLPNPSTSLLKSTALEIVKISSKTLDT 561
+NC + D+C G + S C R ST NP +S +KST + + I +L T
Sbjct: 81 VNCPNDILDYCPGNGNAYSSASCTCNLRATSTN---NPDSSAIKSTNISFITIFVLSLST 137
Query: 562 I 564
I
Sbjct: 138 I 138
>ref|XP_219511.1| similar to CG2839-PA [Drosophila melanogaster] [Rattus norvegicus]
Length = 391
Score = 32.7 bits (73), Expect = 3.6
Identities = 19/65 (29%), Positives = 35/65 (53%), Gaps = 5/65 (7%)
Frame = +1
Query: 28 WNAIYIFKKRNKYMAPEVLQTQ-----KHWKKEREGKNPAKEKASLLLQNPTIKAPHLDN 192
WN + + KR + + VL++ ++WK E GK +KEK++ LQ T++ L++
Sbjct: 69 WNGLIVIGKRVELLDRNVLKSNPKLESEYWKLEGTGKRLSKEKST--LQQETVEVKLLNS 126
Query: 193 FANTM 207
T+
Sbjct: 127 VRRTV 131
>ref|NP_635638.1| dipeptidyl anminopeptidase [Xanthomonas campestris pv. campestris
str. ATCC 33913] gi|21111208|gb|AAM39562.1| dipeptidyl
anminopeptidase [Xanthomonas campestris pv. campestris
str. ATCC 33913]
Length = 697
Score = 32.3 bits (72), Expect = 4.7
Identities = 21/75 (28%), Positives = 30/75 (40%), Gaps = 5/75 (6%)
Frame = +1
Query: 7 MGTGPPFWNAIYIFKKRNKYMAPEVLQTQKHWKKEREGKNPAKEKASLLL-----QNPTI 171
+GT PP+W + Y K+ K M K W ER + + + LL +P +
Sbjct: 547 LGTVPPYWASFY--KQLTKRMGDPATAAGKQWLTERSPLSHVDKISKPLLIGQGANDPRV 604
Query: 172 KAPHLDNFANTMPNK 216
K D N M K
Sbjct: 605 KQAESDQIVNAMKAK 619
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 550,428,130
Number of Sequences: 1393205
Number of extensions: 12309747
Number of successful extensions: 39111
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 36359
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 38994
length of database: 448,689,247
effective HSP length: 117
effective length of database: 285,684,262
effective search space used: 22854740960
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
