Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC018451A_C01 KMC018451A_c01
(902 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||S51376 sucrose cleavage protein - potato gi|707001|gb|AAB33... 276 4e-73
ref|NP_566821.1| putative sucrose cleavage protein; protein id: ... 259 3e-68
dbj|BAB01287.1| sucrose cleavage protein-like [Arabidopsis thali... 259 3e-68
gb|AAM62596.1| sucrose cleavage protein-like [Arabidopsis thaliana] 251 1e-65
dbj|BAB08521.1| sucrose cleavage protein-like [Arabidopsis thali... 250 2e-65
>pir||S51376 sucrose cleavage protein - potato gi|707001|gb|AAB33256.1|
Clostridium pasteurianum ferredoxin homolog [Solanum
tuberosum]
Length = 322
Score = 276 bits (705), Expect = 4e-73
Identities = 128/241 (53%), Positives = 175/241 (72%), Gaps = 3/241 (1%)
Frame = +3
Query: 9 RVKTKITVCEAREEDDFSQGDVLIFPDMIKYRGLEESNVDSFFDDVMVSGKLWSGGAQNV 188
++KT +T+CE R++ + S+GD+LIFP+MIKYR L+ES+VD+F DDV+V+G WS G Q
Sbjct: 55 KIKTLLTICEVRDDMEVSEGDILIFPEMIKYRDLKESDVDAFVDDVLVNGNPWSSGLQES 114
Query: 189 FAGSHIFVCAHGSRDVRCGVCGPILIEKLHEEVQLRGLKDQISVMACSHVGGHKYAGNVI 368
+GS++FVCAH RD RCGVCGPILIE+ + ++ +GLKD++ V ACSH+GGHKYAGNVI
Sbjct: 115 LSGSYVFVCAHNLRDRRCGVCGPILIEEFSKLIESKGLKDKVRVAACSHIGGHKYAGNVI 174
Query: 369 IFSPGQDGKFMGHWYGYVTPSDVPALLDQHIAKGEIIQKLWRGQMEPPVAEVKGADDQKL 548
IFS G+DG +GHWYGYVTPSDVPALLD+HI +G++I++LWRGQM D+QK+
Sbjct: 175 IFSSGKDGDIVGHWYGYVTPSDVPALLDEHIGEGKVIERLWRGQMGQYEKVTDKVDEQKV 234
Query: 549 ANGDITRKAKKNDEESKDENVA---GCCQGLSGVSCCRSGSSEYNKGTD*AQENQGS*IS 719
++T + KK E E+ CCQG +GVSCCR S+E + ++ QG+ +
Sbjct: 235 P--EVTNEEKKPLENGSQESSVTSFSCCQGAAGVSCCRDASAEQEEN----KKGQGTVSN 288
Query: 720 W 722
W
Sbjct: 289 W 289
>ref|NP_566821.1| putative sucrose cleavage protein; protein id: At3g27570.1,
supported by cDNA: 40179., supported by cDNA:
gi_16604337, supported by cDNA: gi_19699187 [Arabidopsis
thaliana] gi|16604338|gb|AAL24175.1| AT3g27570/MMJ24_12
[Arabidopsis thaliana] gi|19699188|gb|AAL90960.1|
AT3g27570/MMJ24_12 [Arabidopsis thaliana]
Length = 340
Score = 259 bits (663), Expect = 3e-68
Identities = 121/221 (54%), Positives = 157/221 (70%), Gaps = 2/221 (0%)
Frame = +3
Query: 12 VKTKITVCEAREEDDFSQGDVLIFPDMIKYRGLEESNVDSFFDDVMVSGKLWSGGAQNVF 191
V+TK+TVC E D GDVLIFP+M++Y+ +++++VD+F +DV+V GK W+ G Q
Sbjct: 79 VETKLTVCGGGGESD---GDVLIFPEMVRYKAIQDTDVDAFVEDVLVKGKTWTSGIQEEL 135
Query: 192 AGSHIFVCAHGSRDVRCGVCGPILIEKLHEEVQLRGLKDQISVMACSHVGGHKYAGNVII 371
GS +FVCAHGSRD RCGVCGP+L+EK +E+ RGL D+I V+ CSH+GGHKYAGN+I+
Sbjct: 136 TGSFVFVCAHGSRDKRCGVCGPVLMEKFEQEISSRGLSDKIFVLPCSHIGGHKYAGNLIV 195
Query: 372 FSPGQDGKFMGHWYGYVTPSDVPALLDQHIAKGEIIQKLWRGQM--EPPVAEVKGADDQK 545
FSP G GHWYGYVTP DVPA+LDQHIAKGEIIQ L RGQM P E + D+ K
Sbjct: 196 FSPDSAGNVSGHWYGYVTPDDVPAMLDQHIAKGEIIQNLSRGQMRLRPEGEEAEKEDEHK 255
Query: 546 LANGDITRKAKKNDEESKDENVAGCCQGLSGVSCCRSGSSE 668
+ NG+ ++ E K GCCQG +GVSCC+ ++E
Sbjct: 256 IPNGNSVMVEEREPVEQKG-FTGGCCQGANGVSCCQEQAAE 295
>dbj|BAB01287.1| sucrose cleavage protein-like [Arabidopsis thaliana]
Length = 314
Score = 259 bits (663), Expect = 3e-68
Identities = 121/221 (54%), Positives = 157/221 (70%), Gaps = 2/221 (0%)
Frame = +3
Query: 12 VKTKITVCEAREEDDFSQGDVLIFPDMIKYRGLEESNVDSFFDDVMVSGKLWSGGAQNVF 191
V+TK+TVC E D GDVLIFP+M++Y+ +++++VD+F +DV+V GK W+ G Q
Sbjct: 53 VETKLTVCGGGGESD---GDVLIFPEMVRYKAIQDTDVDAFVEDVLVKGKTWTSGIQEEL 109
Query: 192 AGSHIFVCAHGSRDVRCGVCGPILIEKLHEEVQLRGLKDQISVMACSHVGGHKYAGNVII 371
GS +FVCAHGSRD RCGVCGP+L+EK +E+ RGL D+I V+ CSH+GGHKYAGN+I+
Sbjct: 110 TGSFVFVCAHGSRDKRCGVCGPVLMEKFEQEISSRGLSDKIFVLPCSHIGGHKYAGNLIV 169
Query: 372 FSPGQDGKFMGHWYGYVTPSDVPALLDQHIAKGEIIQKLWRGQM--EPPVAEVKGADDQK 545
FSP G GHWYGYVTP DVPA+LDQHIAKGEIIQ L RGQM P E + D+ K
Sbjct: 170 FSPDSAGNVSGHWYGYVTPDDVPAMLDQHIAKGEIIQNLSRGQMRLRPEGEEAEKEDEHK 229
Query: 546 LANGDITRKAKKNDEESKDENVAGCCQGLSGVSCCRSGSSE 668
+ NG+ ++ E K GCCQG +GVSCC+ ++E
Sbjct: 230 IPNGNSVMVEEREPVEQKG-FTGGCCQGANGVSCCQEQAAE 269
>gb|AAM62596.1| sucrose cleavage protein-like [Arabidopsis thaliana]
Length = 333
Score = 251 bits (641), Expect = 1e-65
Identities = 121/215 (56%), Positives = 155/215 (71%), Gaps = 1/215 (0%)
Frame = +3
Query: 12 VKTKITVCEAREEDDFSQGDVLIFPDMIKYRGLEESNVDSFFDDVMVSGKLWSGGAQNVF 191
V+TK+ VCE D GDVLIFPDMI+Y+G+++++V+ FF+DV+V+GK WS G Q
Sbjct: 77 VQTKLNVCEGGGSD----GDVLIFPDMIRYKGVKDTDVEGFFEDVLVNGKPWSSGIQEEI 132
Query: 192 AGSHIFVCAHGSRDVRCGVCGPILIEKLHEEVQLRGLKDQISVMACSHVGGHKYAGNVII 371
+G+ +FVC H SRD RCGVCGP+++E+ +E+ RGL DQI++ CSHVG HKYAGN+II
Sbjct: 133 SGTFVFVCTHASRDKRCGVCGPVILERFKQEIGSRGLSDQITLKRCSHVGQHKYAGNLII 192
Query: 372 FSPGQDGKFMGHWYGYVTPSDVPALLDQHIAKGEIIQKLWRGQMEPPVAEVKGADDQK-L 548
F P GK G+WYGYVTP DVP LLDQHIAKGEIIQ++WRGQM P E + +QK +
Sbjct: 193 FCPDSAGKITGNWYGYVTPDDVPELLDQHIAKGEIIQRIWRGQMGLPGGEAEKVHEQKVI 252
Query: 549 ANGDITRKAKKNDEESKDENVAGCCQGLSGVSCCR 653
NG+ K EESK GCCQG +GVSCC+
Sbjct: 253 PNGNGVVK-----EESKG-FTGGCCQGSNGVSCCQ 281
>dbj|BAB08521.1| sucrose cleavage protein-like [Arabidopsis thaliana]
Length = 309
Score = 250 bits (639), Expect = 2e-65
Identities = 121/215 (56%), Positives = 154/215 (71%), Gaps = 1/215 (0%)
Frame = +3
Query: 12 VKTKITVCEAREEDDFSQGDVLIFPDMIKYRGLEESNVDSFFDDVMVSGKLWSGGAQNVF 191
V+TK+ VCE D GDVLIFPDMI+Y+G+++++V+ FF+DV+V+GK WS G Q
Sbjct: 53 VQTKLNVCEGGGSD----GDVLIFPDMIRYKGVKDTDVEGFFEDVLVNGKPWSSGIQEEI 108
Query: 192 AGSHIFVCAHGSRDVRCGVCGPILIEKLHEEVQLRGLKDQISVMACSHVGGHKYAGNVII 371
+G+ +FVC H SRD RCGVCGP+++E+ +E+ RGL DQI++ CSHVG HKYAGN+II
Sbjct: 109 SGTFVFVCTHASRDKRCGVCGPVILERFKQEIGSRGLSDQITLKRCSHVGQHKYAGNLII 168
Query: 372 FSPGQDGKFMGHWYGYVTPSDVPALLDQHIAKGEIIQKLWRGQMEPPVAEVKGADDQK-L 548
F P GK G+WYGYVTP DVP LLDQHIAKGEIIQ++WRGQM P E + +QK +
Sbjct: 169 FCPDSAGKITGNWYGYVTPDDVPELLDQHIAKGEIIQRIWRGQMGLPGGEAEKVHEQKVI 228
Query: 549 ANGDITRKAKKNDEESKDENVAGCCQGLSGVSCCR 653
NG K EESK GCCQG +GVSCC+
Sbjct: 229 PNGHGVVK-----EESKG-FTGGCCQGSNGVSCCQ 257
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 825,986,465
Number of Sequences: 1393205
Number of extensions: 19736751
Number of successful extensions: 62748
Number of sequences better than 10.0: 68
Number of HSP's better than 10.0 without gapping: 58876
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 62605
length of database: 448,689,247
effective HSP length: 123
effective length of database: 277,325,032
effective search space used: 49086530664
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
