KMC018328A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KMC018328A_C01 KMC018328A_c01
caaaacaAAAAAAATGGCGGGTGAGGTGCTGGTGGAGAAGCAGGAAGAACAATCTCTAAA
GCTGAAAGTCACTAACAAAAGCCATGTGAAACCTGAGGAGAAAATTGGGAAAAAAGAGTA
CCAGCTGGTGACTTTTGACCTCCCTTACTTAGCTTTTTATTATAACCAGAAGCTCTTGTT
TTACAAAGGGGAAGGGTTTGAGGGACTGGTTGAGAAACTGAAAGATGGGCTTGCTGTAGT
TTTAAAGGAGTTTCATCAACTTGGTGGTAAGATTGGGAAAGATGAGGAGGGTGTGTTTAG
GGTTGAATTTGATGATGATTTGCCTGGGGTTGAGGTCATTGAGGCTGTTGCTGATGAGGT
TGCTGTGGCAGATCTCACTCTTACTGAGAGTAGCAGCATTTTGAAGGAGCTGATTCCTTA
CAGTGGTGTCTTGAACTTGGAAGGCATGCACAGGCCCTTGCTTGCAGTTCAGTTCACCAA
GCTCAAAGATGGGCTTGCCATGGGCTTGGCGTTCAACCACGCTGTCCTAGACGGGACTTC
CACGTGGCACTTCATGAGTTCATGGGCTGAGATCTGTTGCGGCGCACCCTTCCCATCAGT


Nr search

BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KMC018328A_C01 KMC018328A_c01
         (600 letters)

Database: nr 
           1,393,205 sequences; 448,689,247 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

dbj|BAA93453.1| acyltransferase homolog [Petunia x hybrida]           264  6e-70
gb|AAL67994.1| acyltransferase-like protein [Gossypium hirsutum]      256  2e-67
ref|NP_197782.1| acyltransferase; protein id: At5g23940.1, suppo...   229  2e-59
ref|NP_201516.1| anthranilate N-hydroxycinnamoyl/benzoyltransfer...   102  5e-21
ref|NP_181527.1| putative anthocyanin 5-aromatic acyltransferase...    97  2e-19

>dbj|BAA93453.1| acyltransferase homolog [Petunia x hybrida]
          Length = 448

 Score =  264 bits (675), Expect = 6e-70
 Identities = 130/192 (67%), Positives = 159/192 (82%), Gaps = 1/192 (0%)
 Frame = +2

Query: 14  MAGEVLVEKQEEQSLKLKVTNKSHVKPEEKIGKKEYQLVTFDLPYLAFYYNQKLLFYKG- 190
           MAGEV     +++  K+KV  K++VKP + +GKKE QLVTFDLPYLAFYYNQK L YKG 
Sbjct: 1   MAGEVA----KQEVTKVKVLKKTNVKPHKPLGKKECQLVTFDLPYLAFYYNQKFLIYKGA 56

Query: 191 EGFEGLVEKLKDGLAVVLKEFHQLGGKIGKDEEGVFRVEFDDDLPGVEVIEAVADEVAVA 370
           E F+  VEK+KDGLA+VL +F+QL GK+GKDEEGVFRVE+DDD+ GVEV  AVA+E+ VA
Sbjct: 57  ENFDETVEKIKDGLALVLVDFYQLAGKLGKDEEGVFRVEYDDDMDGVEVTVAVAEEIEVA 116

Query: 371 DLTLTESSSILKELIPYSGVLNLEGMHRPLLAVQFTKLKDGLAMGLAFNHAVLDGTSTWH 550
           DLT  E ++  ++LIP + +LNLEG+HRPLLAVQ TKLKDGL MGLAFNHAVLDGTSTWH
Sbjct: 117 DLTDEEGTTKFQDLIPCNKILNLEGLHRPLLAVQLTKLKDGLTMGLAFNHAVLDGTSTWH 176

Query: 551 FMSSWAEICCGA 586
           FM+SW+E+CCG+
Sbjct: 177 FMTSWSELCCGS 188

>gb|AAL67994.1| acyltransferase-like protein [Gossypium hirsutum]
          Length = 434

 Score =  256 bits (653), Expect = 2e-67
 Identities = 123/172 (71%), Positives = 148/172 (85%), Gaps = 3/172 (1%)
 Frame = +2

Query: 77  KSHVKPEEKIGKKEYQLVTFDLPYLAFYYNQKLLFYKGEG---FEGLVEKLKDGLAVVLK 247
           KSHVKP + IG+KE  LVTFDLPYLAFYYNQKLLFYK +G   FE  VEKLK+GL VVL+
Sbjct: 3   KSHVKPGKLIGRKECPLVTFDLPYLAFYYNQKLLFYKNDGGGEFEDKVEKLKEGLRVVLE 62

Query: 248 EFHQLGGKIGKDEEGVFRVEFDDDLPGVEVIEAVADEVAVADLTLTESSSILKELIPYSG 427
           EF+QLGGK+GKD++GV RV++DDD+ GVEV+EAVA+ + V +LT  + +S  KELIP++G
Sbjct: 63  EFYQLGGKLGKDDDGVLRVDYDDDMDGVEVVEAVAEGITVDELTGDDGTSSFKELIPFNG 122

Query: 428 VLNLEGMHRPLLAVQFTKLKDGLAMGLAFNHAVLDGTSTWHFMSSWAEICCG 583
           VLNLEG+HRPLL++Q TKLKDG+AMG AFNHAVLDGTSTWHFMSSWA+IC G
Sbjct: 123 VLNLEGLHRPLLSIQLTKLKDGVAMGCAFNHAVLDGTSTWHFMSSWAQICNG 174

>ref|NP_197782.1| acyltransferase; protein id: At5g23940.1, supported by cDNA: 35357.
           [Arabidopsis thaliana] gi|10176861|dbj|BAB10067.1|
           acyltransferase [Arabidopsis thaliana]
           gi|22135843|gb|AAM91107.1| AT5g23940/MRO11_2
           [Arabidopsis thaliana] gi|23397255|gb|AAN31909.1|
           putative acyltransferase [Arabidopsis thaliana]
           gi|24111347|gb|AAN46797.1| At5g23940/MRO11_2
           [Arabidopsis thaliana]
          Length = 484

 Score =  229 bits (585), Expect = 2e-59
 Identities = 117/190 (61%), Positives = 144/190 (75%), Gaps = 13/190 (6%)
 Frame = +2

Query: 56  LKLKVTNKSHVKPEEKI-GKKEYQLVTFDLPYLAFYYNQKLLFYKGEGFEGL-------- 208
           +K+K+ +K+HVKP + + GKK++ L TFDLPYLAFYYNQK L YK +    L        
Sbjct: 1   MKIKIMSKTHVKPTKPVLGKKQFHLTTFDLPYLAFYYNQKFLLYKFQNLLDLEEPTFQNE 60

Query: 209 -VEKLKDGLAVVLKEFHQLGGKIGKDEEGVFRVEFD---DDLPGVEVIEAVADEVAVADL 376
            VE LKDGL +VL++F+QL GK+ KD+EGVFRVE+D    ++ GVE   A A +V V DL
Sbjct: 61  VVENLKDGLGLVLEDFYQLAGKLAKDDEGVFRVEYDAEDSEINGVEFSVAHAADVTVDDL 120

Query: 377 TLTESSSILKELIPYSGVLNLEGMHRPLLAVQFTKLKDGLAMGLAFNHAVLDGTSTWHFM 556
           T  + ++  KEL+PY+G+LNLEG+ RPLLAVQ TKLKDGLAMGLAFNHAVLDGTSTWHFM
Sbjct: 121 TAEDGTAKFKELVPYNGILNLEGLSRPLLAVQVTKLKDGLAMGLAFNHAVLDGTSTWHFM 180

Query: 557 SSWAEICCGA 586
           SSWAEIC GA
Sbjct: 181 SSWAEICRGA 190

>ref|NP_201516.1| anthranilate N-hydroxycinnamoyl/benzoyltransferase-like protein;
           protein id: At5g67150.1, supported by cDNA: 114226.,
           supported by cDNA: gi_17381221 [Arabidopsis thaliana]
           gi|10177602|dbj|BAB10949.1| anthranilate
           N-hydroxycinnamoyl/benzoyltransferase-like protein
           [Arabidopsis thaliana] gi|17381222|gb|AAL36423.1|
           putative anthranilate
           N-hydroxycinnamoyl/benzoyltransferase [Arabidopsis
           thaliana] gi|21436437|gb|AAM51419.1| putative
           anthranilate N-hydroxycinnamoyl/benzoyltransferase
           [Arabidopsis thaliana] gi|21536885|gb|AAM61217.1|
           anthranilate N-hydroxycinnamoyl/benzoyltransferase-like
           protein [Arabidopsis thaliana]
          Length = 448

 Score =  102 bits (253), Expect = 5e-21
 Identities = 64/180 (35%), Positives = 101/180 (55%), Gaps = 10/180 (5%)
 Frame = +2

Query: 68  VTNKSHVKPE---EKIGKKEYQLVTFDLPYLAFYYNQK-LLFYKGEGFEGLVEKLKDGLA 235
           V +KS V+PE   E+  + +  L  +DL +L   Y Q+ LLF + +    ++ +LK  L+
Sbjct: 7   VISKSIVRPESYNEESDRVKIHLTPWDLFFLRSEYPQRGLLFPQPDPETHIISQLKSSLS 66

Query: 236 VVLKEFHQLGGKIGK---DEEGVFRVEFDDDLPGVEVIEAVADEVAVADLTLTESSSI-- 400
           V LK F+   G++ K   ++ G      D D  GV+ I A A  V+V+D+     S++  
Sbjct: 67  VALKIFYPFAGRLVKVENEDAGTASFYVDCDGSGVKFIHASAKSVSVSDVLEPVDSNVPE 126

Query: 401 -LKELIPYSGVLNLEGMHRPLLAVQFTKLKDGLAMGLAFNHAVLDGTSTWHFMSSWAEIC 577
            L    P +GV + EG+   L+A Q T+LKDG+ +G  +NH V DG+S W F ++W+EIC
Sbjct: 127 FLNRFFPANGVRSCEGISESLIAFQVTELKDGVFIGFGYNHIVADGSSFWSFFNTWSEIC 186

>ref|NP_181527.1| putative anthocyanin 5-aromatic acyltransferase; protein id:
           At2g39980.1, supported by cDNA: gi_13937225 [Arabidopsis
           thaliana] gi|25408653|pir||G84823 probable anthocyanin
           5-aromatic acyltransferase [imported] - Arabidopsis
           thaliana gi|2088651|gb|AAB95283.1| putative anthocyanin
           5-aromatic acyltransferase [Arabidopsis thaliana]
           gi|13937226|gb|AAK50105.1|AF372968_1 At2g39980/T28M21.14
           [Arabidopsis thaliana] gi|21700883|gb|AAM70565.1|
           At2g39980/T28M21.14 [Arabidopsis thaliana]
          Length = 482

 Score = 97.1 bits (240), Expect = 2e-19
 Identities = 61/183 (33%), Positives = 100/183 (54%), Gaps = 5/183 (2%)
 Frame = +2

Query: 53  SLKLKVT--NKSHVKPEEKIGKKEYQLVTFDLPYLAFYYNQK--LLFYKGEGFEGLVEKL 220
           SL+  VT  +++ V P++K    + +L   DLP L+ +Y QK  L          L+  L
Sbjct: 3   SLEKSVTIISRNRVFPDQKSTLVDLKLSVSDLPMLSCHYIQKGCLFTCPNLPLPALISHL 62

Query: 221 KDGLAVVLKEFHQLGGKIGKDEEGVFRVEFDDDLPGVEVIEAVADEVAVADLTL-TESSS 397
           K  L++ L  F  L G++     G   +  +D   G + + A A  + V+D+    +   
Sbjct: 63  KHSLSITLTHFPPLAGRLSTSSSGHVFLTCND--AGADFVFAQAKSIHVSDVIAGIDVPD 120

Query: 398 ILKELIPYSGVLNLEGMHRPLLAVQFTKLKDGLAMGLAFNHAVLDGTSTWHFMSSWAEIC 577
           ++KE   Y   ++ EG +RP+LAVQ T+L DG+ +G + NHAV DGTS W+F++++AE+ 
Sbjct: 121 VVKEFFTYDRAVSYEGHNRPILAVQVTELNDGVFIGCSVNHAVTDGTSLWNFINTFAEVS 180

Query: 578 CGA 586
            GA
Sbjct: 181 RGA 183

  Database: nr
    Posted date:  Apr 1, 2003  2:05 AM
  Number of letters in database: 448,689,247
  Number of sequences in database:  1,393,205
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 540,244,137
Number of Sequences: 1393205
Number of extensions: 12403713
Number of successful extensions: 65582
Number of sequences better than 10.0: 566
Number of HSP's better than 10.0 without gapping: 48064
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 59773
length of database: 448,689,247
effective HSP length: 117
effective length of database: 285,684,262
effective search space used: 23426109484
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)


EST assemble image


clone accession position
1 MF057f04_f BP031307 1 458
2 MF045h01_f BP030690 8 573
3 MF014a07_f BP028956 8 233
4 SPD039c03_f BP047085 11 426
5 MFBL016g02_f BP042071 25 602
6 MFBL043d01_f BP043436 85 471




Lotus japonicus
Kazusa DNA Research Institute