Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC018322A_C01 KMC018322A_c01
(736 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_181904.1| putative molybdopterin synthase large subunit; ... 134 1e-30
emb|CAD80090.1| putative molybdopterin synthase large subunit [M... 88 1e-16
ref|NP_004522.1| molybdenum cofactor synthesis 2 large subunit M... 73 4e-12
ref|NP_651340.1| CG10238-PA [Drosophila melanogaster] gi|1501040... 72 6e-12
gb|ZP_00000396.1| hypothetical protein [Ferroplasma acidarmanus] 69 7e-11
>ref|NP_181904.1| putative molybdopterin synthase large subunit; protein id:
At2g43760.1, supported by cDNA: gi_13605721 [Arabidopsis
thaliana] gi|25408901|pir||B84870 probable molybdopterin
synthase large subunit [imported] - Arabidopsis thaliana
gi|2281094|gb|AAB64030.1| putative molybdopterin
synthase large subunit [Arabidopsis thaliana]
gi|4469121|emb|CAB38428.1| molybdopterin synthase large
subunit [Arabidopsis thaliana]
gi|6899949|emb|CAB71291.1| molybdopterin synthase, large
subunit [Arabidopsis thaliana]
gi|13605722|gb|AAK32854.1|AF361842_1 At2g43760/F18O19.13
[Arabidopsis thaliana] gi|24797010|gb|AAN64517.1|
At2g43760/F18O19.13 [Arabidopsis thaliana]
Length = 198
Score = 134 bits (338), Expect = 1e-30
Identities = 63/97 (64%), Positives = 80/97 (81%)
Frame = -3
Query: 731 VPVGETSVFIAVSSVHRADALEACKYLIDELKATVPIWKKEVYSNGEVWKENSEFLDRRS 552
VPVGETSV IAVSSVHRAD L+ACK+LIDELKA+VPIWKKEVY+NGE+WKENSEF+++R
Sbjct: 92 VPVGETSVLIAVSSVHRADGLDACKFLIDELKASVPIWKKEVYTNGEIWKENSEFMEKRL 151
Query: 551 ELGNKDVACSGEKAEVKDHSKKRCCGTKVRVDNEGSH 441
EL K + +K V++H ++ CCG+KVRV+ + H
Sbjct: 152 ELAEKRDSIV-KKTVVEEHRRRGCCGSKVRVEEDEEH 187
>emb|CAD80090.1| putative molybdopterin synthase large subunit [Momordica charantia]
Length = 110
Score = 88.2 bits (217), Expect = 1e-16
Identities = 40/53 (75%), Positives = 49/53 (91%)
Frame = -3
Query: 731 VPVGETSVFIAVSSVHRADALEACKYLIDELKATVPIWKKEVYSNGEVWKENS 573
VPVGE SVFIAVS++ RADA+++C+++IDELKA+VPIWKKEVY NGEV KENS
Sbjct: 55 VPVGEISVFIAVSAIQRADAMDSCRFVIDELKASVPIWKKEVYDNGEVRKENS 107
>ref|NP_004522.1| molybdenum cofactor synthesis 2 large subunit MOSC2B [Homo sapiens]
gi|20138899|sp|O96007|MS2L_HUMAN Molybdenum cofactor
synthesis protein 2 large subunit (Molybdopterin
synthase large subunit) (MPT synthase large subunit)
(MOCS2B) (MOCO1-B) gi|25412345|pir||B59370 molybdopterin
synthase large chain [imported] - human
gi|4235631|gb|AAD13297.1| molybdopterin synthase large
subunit [Homo sapiens] gi|4262373|gb|AAD14599.1|
molybdopterin-synthase large subunit [Homo sapiens]
gi|7688675|gb|AAF67478.1|AF155659_1 molybdenum cofactor
biosysthesis protein E [Homo sapiens]
gi|28278189|gb|AAH46097.1| Similar to molybdenum
cofactor synthesis 2 [Homo sapiens]
Length = 188
Score = 73.2 bits (178), Expect = 4e-12
Identities = 34/54 (62%), Positives = 37/54 (67%)
Frame = -3
Query: 731 VPVGETSVFIAVSSVHRADALEACKYLIDELKATVPIWKKEVYSNGEVWKENSE 570
VPV E S+ IAVSS HRA +LEA Y ID LKA VPIWKKE+Y WK N E
Sbjct: 128 VPVSEASIIIAVSSAHRAASLEAVSYAIDTLKAKVPIWKKEIYEESSTWKGNKE 181
>ref|NP_651340.1| CG10238-PA [Drosophila melanogaster] gi|15010408|gb|AAK77252.1|
GH02855p [Drosophila melanogaster]
gi|23172257|gb|AAF56405.2| CG10238-PA [Drosophila
melanogaster]
Length = 367
Score = 72.4 bits (176), Expect = 6e-12
Identities = 40/82 (48%), Positives = 51/82 (61%), Gaps = 3/82 (3%)
Frame = -3
Query: 734 TVPVGETSVFIAVSSVHRADALEACKYLIDELKATVPIWKKEVY--SNGEVWKENSEFL- 564
TVPV E SV IA SS HR++ALE+ + ID+LK VPIWKKE+Y N WKEN E +
Sbjct: 85 TVPVCEASVVIAASSPHRSEALESVSFAIDQLKTRVPIWKKEIYDGDNDSEWKENKESIR 144
Query: 563 DRRSELGNKDVACSGEKAEVKD 498
++S+ G AC + E D
Sbjct: 145 PKKSKSGFNYAACPCKVEESHD 166
>gb|ZP_00000396.1| hypothetical protein [Ferroplasma acidarmanus]
Length = 136
Score = 68.9 bits (167), Expect = 7e-11
Identities = 30/53 (56%), Positives = 40/53 (74%)
Frame = -3
Query: 731 VPVGETSVFIAVSSVHRADALEACKYLIDELKATVPIWKKEVYSNGEVWKENS 573
V VGE S+ IAVSS HR A AC+++ID++K PIWKKE+YS+GEVW+ +
Sbjct: 84 VNVGEDSIGIAVSSEHRDSAFHACEFIIDKIKILPPIWKKEIYSSGEVWRSEA 136
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 617,919,460
Number of Sequences: 1393205
Number of extensions: 13191445
Number of successful extensions: 32832
Number of sequences better than 10.0: 116
Number of HSP's better than 10.0 without gapping: 31769
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32818
length of database: 448,689,247
effective HSP length: 120
effective length of database: 281,504,647
effective search space used: 34906576228
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
