Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC018279A_C01 KMC018279A_c01
(553 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAB09764.1| serine protease-like protein [Arabidopsis thaliana] 133 1e-30
ref|NP_568901.1| subtilisin-like serine protease; protein id: At... 133 1e-30
pir||T12963 subtilisin homolog T6H20.120 - Arabidopsis thaliana ... 132 4e-30
ref|NP_566888.1| subtilisin-like serine protease; protein id: At... 132 4e-30
ref|NP_566887.1| subtilisin-like serine protease; protein id: At... 128 5e-29
>dbj|BAB09764.1| serine protease-like protein [Arabidopsis thaliana]
Length = 729
Score = 133 bits (335), Expect = 1e-30
Identities = 71/144 (49%), Positives = 99/144 (68%), Gaps = 1/144 (0%)
Frame = -3
Query: 551 LVYDISMKDYVNMLCNYGYSAKKLKIIAGAHSLSCYGEHHRSLVKDLNYPAITVNVKPLE 372
LVY++ +DY+ MLC G+ + L +G +++C R+ VKDLNYP +T V L+
Sbjct: 584 LVYEVETEDYLKMLCAEGFDSTTLTTTSG-QNVTC---SERTEVKDLNYPTMTTFVSSLD 639
Query: 371 PYIIKVNRTVTNVGFPHNLTYKATVLP-NLKMNITVEPEVLRFESLHEKKSFIVMVSGGG 195
P+ + RTVTNVGFP N TYKA+V+P ++ I++EPE+LRF L EKKSF+V +SG
Sbjct: 640 PFNVTFKRTVTNVGFP-NSTYKASVVPLQPELQISIEPEILRFGFLEEKKSFVVTISGKE 698
Query: 194 LRISSAISSSLVWSDGKHYVKSPI 123
L+ S +SSS+VWSDG H V+SPI
Sbjct: 699 LKDGSFVSSSVVWSDGSHSVRSPI 722
>ref|NP_568901.1| subtilisin-like serine protease; protein id: At5g59190.1
[Arabidopsis thaliana]
Length = 693
Score = 133 bits (335), Expect = 1e-30
Identities = 71/144 (49%), Positives = 99/144 (68%), Gaps = 1/144 (0%)
Frame = -3
Query: 551 LVYDISMKDYVNMLCNYGYSAKKLKIIAGAHSLSCYGEHHRSLVKDLNYPAITVNVKPLE 372
LVY++ +DY+ MLC G+ + L +G +++C R+ VKDLNYP +T V L+
Sbjct: 548 LVYEVETEDYLKMLCAEGFDSTTLTTTSG-QNVTC---SERTEVKDLNYPTMTTFVSSLD 603
Query: 371 PYIIKVNRTVTNVGFPHNLTYKATVLP-NLKMNITVEPEVLRFESLHEKKSFIVMVSGGG 195
P+ + RTVTNVGFP N TYKA+V+P ++ I++EPE+LRF L EKKSF+V +SG
Sbjct: 604 PFNVTFKRTVTNVGFP-NSTYKASVVPLQPELQISIEPEILRFGFLEEKKSFVVTISGKE 662
Query: 194 LRISSAISSSLVWSDGKHYVKSPI 123
L+ S +SSS+VWSDG H V+SPI
Sbjct: 663 LKDGSFVSSSVVWSDGSHSVRSPI 686
>pir||T12963 subtilisin homolog T6H20.120 - Arabidopsis thaliana
gi|5541674|emb|CAB51180.1| subtilisin-like proteinase
homolog [Arabidopsis thaliana]
Length = 736
Score = 132 bits (331), Expect = 4e-30
Identities = 67/145 (46%), Positives = 98/145 (67%)
Frame = -3
Query: 551 LVYDISMKDYVNMLCNYGYSAKKLKIIAGAHSLSCYGEHHRSLVKDLNYPAITVNVKPLE 372
LVY+ + D++ LC + Y+ KKL++I+G S SC E +SL ++LNYP+++ V +
Sbjct: 593 LVYEANKSDHITFLCGFNYTGKKLRLISGDSS-SCTKEQTKSLTRNLNYPSMSAQVSGTK 651
Query: 371 PYIIKVNRTVTNVGFPHNLTYKATVLPNLKMNITVEPEVLRFESLHEKKSFIVMVSGGGL 192
P+ + RTVTNVG P N TYKA V+ + K+ + V P VL +SL+EKKSF V VSG G
Sbjct: 652 PFKVTFRRTVTNVGRP-NATYKAKVVGS-KLKVKVVPAVLSLKSLYEKKSFTVTVSGAGP 709
Query: 191 RISSAISSSLVWSDGKHYVKSPITV 117
+ + +S+ L+WSDG H+V+SPI V
Sbjct: 710 KAENLVSAQLIWSDGVHFVRSPIVV 734
>ref|NP_566888.1| subtilisin-like serine protease; protein id: At3g46850.1 [Arabidopsis
thaliana]
Length = 737
Score = 132 bits (331), Expect = 4e-30
Identities = 67/145 (46%), Positives = 98/145 (67%)
Frame = -3
Query: 551 LVYDISMKDYVNMLCNYGYSAKKLKIIAGAHSLSCYGEHHRSLVKDLNYPAITVNVKPLE 372
LVY+ + D++ LC + Y+ KKL++I+G S SC E +SL ++LNYP+++ V +
Sbjct: 594 LVYEANKSDHITFLCGFNYTGKKLRLISGDSS-SCTKEQTKSLTRNLNYPSMSAQVSGTK 652
Query: 371 PYIIKVNRTVTNVGFPHNLTYKATVLPNLKMNITVEPEVLRFESLHEKKSFIVMVSGGGL 192
P+ + RTVTNVG P N TYKA V+ + K+ + V P VL +SL+EKKSF V VSG G
Sbjct: 653 PFKVTFRRTVTNVGRP-NATYKAKVVGS-KLKVKVVPAVLSLKSLYEKKSFTVTVSGAGP 710
Query: 191 RISSAISSSLVWSDGKHYVKSPITV 117
+ + +S+ L+WSDG H+V+SPI V
Sbjct: 711 KAENLVSAQLIWSDGVHFVRSPIVV 735
>ref|NP_566887.1| subtilisin-like serine protease; protein id: At3g46840.1 [Arabidopsis
thaliana]
Length = 740
Score = 128 bits (321), Expect = 5e-29
Identities = 67/145 (46%), Positives = 96/145 (66%)
Frame = -3
Query: 551 LVYDISMKDYVNMLCNYGYSAKKLKIIAGAHSLSCYGEHHRSLVKDLNYPAITVNVKPLE 372
LVY+ + D++ LC Y+AK L++I+G S SC E +SL ++LNYP++T V +
Sbjct: 595 LVYEANKSDHIAFLCGLNYTAKNLRLISGDSS-SCTKEQTKSLPRNLNYPSMTAQVSAAK 653
Query: 371 PYIIKVNRTVTNVGFPHNLTYKATVLPNLKMNITVEPEVLRFESLHEKKSFIVMVSGGGL 192
P+ + RTVTNVG P N TYKA V+ + K+ + V P VL +SL+EKKSF V SG G
Sbjct: 654 PFKVIFRRTVTNVGRP-NATYKAKVVGS-KLKVKVVPAVLSLKSLYEKKSFTVTASGAGP 711
Query: 191 RISSAISSSLVWSDGKHYVKSPITV 117
+ + +S+ L+WSDG H+V+SPI V
Sbjct: 712 KAENLVSAQLIWSDGVHFVRSPIVV 736
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 451,522,546
Number of Sequences: 1393205
Number of extensions: 9189172
Number of successful extensions: 19823
Number of sequences better than 10.0: 154
Number of HSP's better than 10.0 without gapping: 19101
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19603
length of database: 448,689,247
effective HSP length: 116
effective length of database: 287,077,467
effective search space used: 19234190289
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
