KMC018277A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KMC018277A_C01 KMC018277A_c01
ctaattgcacctatcaattatggaggtagaaatccaattgtaacgtacactatttttttt
ttgtacacggtagacaaagcTATATAGAAAATAATTTTATTTAATAATTACACCTCCACT
GCGATTGCAATTTGCAATGAACACCCGATGTAGTAGAATTAAACCTCTTTTATTTGTATA
TGACGGGTAGATTTAACCATGTATATAGTTCAATTTTGATCATGAACTTGGGAAAATAGG
CGTGGTGTAAGAATGACTTGGAGCGGGGAAGCTCTTATGTTGCTTAATCCACTTTCTTCA
ACCATATCAACTGGTCCACCATCAACCGTCATTATTTCAAACCCATGTAATAGAGTAGCA
AGTGTCATCTGCATTAGTTTAAGAGCAAATGACATTGCAGGACACATTCTTCTACCTGCG
CCAAATGGAATCAATTCAAAATGTTGGCCCTTAAGATCAACCTCTTTATAGGTTGTGAGA
AATCTCTCTGGGTGAAACTCAAAGGGATCGGAATATAGAAAGGGATCTCGTTGAAGTTTT
GAAATGTTAGTCAAAAGACGTGTTTGAGCAGGAACATGGTATCCACCGACAATACAATCT
TCCATGGACTCG


Nr search

BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KMC018277A_C01 KMC018277A_c01
         (612 letters)

Database: nr 
           1,393,205 sequences; 448,689,247 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

sp|O49859|C824_SOYBN Cytochrome P450 82A4 (P450 CP9) gi|7430685|...   153  2e-36
sp|O49858|C823_SOYBN Cytochrome P450 82A3 (P450 CP6) gi|7430684|...   149  2e-35
pir||T07964 (S)-N-methylcoclaurine 3'-hydroxylase (EC 1.1.3.-) -...   149  3e-35
pir||T05942 cytochrome P450 82C1 - soybean gi|2739004|gb|AAB9459...   148  5e-35
pir||T04650 cytochrome P450 F10N7.240 - Arabidopsis thaliana          143  2e-33

>sp|O49859|C824_SOYBN Cytochrome P450 82A4 (P450 CP9) gi|7430685|pir||T07749 probable
           cytochrome P450 - soybean gi|2765093|emb|CAA71877.1|
           putative cytochrome P450 [Glycine max]
          Length = 525

 Score =  153 bits (386), Expect = 2e-36
 Identities = 67/125 (53%), Positives = 95/125 (75%)
 Frame = -2

Query: 611 ESMEDCIVGGYHVPAQTRLLTNISKLQRDPFLYSDPFEFHPERFLTTYKEVDLKGQHFEL 432
           E  EDC +GGYHV   TRL+TNI K+  DP ++SDPFEF P+RFLTT+K++D+KG HF+L
Sbjct: 393 EFAEDCTLGGYHVKKGTRLITNIWKIHTDPNVWSDPFEFKPDRFLTTHKDIDVKGHHFQL 452

Query: 431 IPFGAGRRMCPAMSFALKLMQMTLATLLHGFEIMTVDGGPVDMVEESGLSNIRASPLQVI 252
           +PFG+GRR+CP +SF L+ + + LA+ LH FEI+     P+DM E  G++N +A+PL+V+
Sbjct: 453 LPFGSGRRVCPGISFGLQTVHLALASFLHSFEILNPSTEPLDMTEAFGVTNTKATPLEVL 512

Query: 251 LTPRL 237
           + P L
Sbjct: 513 VKPCL 517

>sp|O49858|C823_SOYBN Cytochrome P450 82A3 (P450 CP6) gi|7430684|pir||T07748 probable
           cytochrome P450 - soybean gi|2765091|emb|CAA71876.1|
           putative cytochrome P450 [Glycine max]
          Length = 527

 Score =  149 bits (377), Expect = 2e-35
 Identities = 66/124 (53%), Positives = 92/124 (73%)
 Frame = -2

Query: 611 ESMEDCIVGGYHVPAQTRLLTNISKLQRDPFLYSDPFEFHPERFLTTYKEVDLKGQHFEL 432
           E  E+CI+GGYH+   TRL+ N+ K+ RDP ++SDP EF PERFLTT+K+VDL+G +FEL
Sbjct: 395 EFTENCILGGYHIKKGTRLIHNLWKIHRDPSVWSDPLEFKPERFLTTHKDVDLRGHNFEL 454

Query: 431 IPFGAGRRMCPAMSFALKLMQMTLATLLHGFEIMTVDGGPVDMVEESGLSNIRASPLQVI 252
           +PFG+GRR+C  MS  L ++  TLA LLH F+I+     PVDM E  G +N +A+PL+++
Sbjct: 455 LPFGSGRRVCAGMSLGLNMVHFTLANLLHSFDILNPSAEPVDMTEFFGFTNTKATPLEIL 514

Query: 251 LTPR 240
           + PR
Sbjct: 515 VKPR 518

>pir||T07964 (S)-N-methylcoclaurine 3'-hydroxylase (EC 1.1.3.-) - California
           poppy gi|3127031|gb|AAC39454.1| (S)-N-methylcoclaurine
           3'-hydroxylase [Eschscholzia californica]
          Length = 560

 Score =  149 bits (376), Expect = 3e-35
 Identities = 73/134 (54%), Positives = 95/134 (70%), Gaps = 3/134 (2%)
 Frame = -2

Query: 611 ESMEDCIVGGYHVPAQTRLLTNISKLQRDPFLYSDPFEFHPERFLTTYKE---VDLKGQH 441
           E++EDC VGGYH+   TRLL NI KLQRDP ++S+P EF PERFL        +D +GQH
Sbjct: 426 EAIEDCNVGGYHIKTGTRLLVNIWKLQRDPRVWSNPSEFRPERFLDNQSNGTLLDFRGQH 485

Query: 440 FELIPFGAGRRMCPAMSFALKLMQMTLATLLHGFEIMTVDGGPVDMVEESGLSNIRASPL 261
           FE IPFG+GRRMCP ++FA  ++ MTLA LL  F++ T    PVDM E SGL+  + +PL
Sbjct: 486 FEYIPFGSGRRMCPGVNFATLILHMTLARLLQAFDLSTPSSSPVDMTEGSGLTMPKVTPL 545

Query: 260 QVILTPRLFSQVHD 219
           +V+LTPRL   ++D
Sbjct: 546 KVLLTPRLPLPLYD 559

>pir||T05942 cytochrome P450 82C1 - soybean gi|2739004|gb|AAB94590.1| CYP82C1p
           [Glycine max]
          Length = 532

 Score =  148 bits (374), Expect = 5e-35
 Identities = 66/131 (50%), Positives = 100/131 (75%), Gaps = 1/131 (0%)
 Frame = -2

Query: 608 SMEDCIV-GGYHVPAQTRLLTNISKLQRDPFLYSDPFEFHPERFLTTYKEVDLKGQHFEL 432
           +MEDC   GGYH+PA TRL+ N  K+ RD  ++SDP +F P RFLT++K+VD+KGQ++EL
Sbjct: 401 AMEDCTFSGGYHIPAGTRLMVNAWKIHRDGRVWSDPHDFKPGRFLTSHKDVDVKGQNYEL 460

Query: 431 IPFGAGRRMCPAMSFALKLMQMTLATLLHGFEIMTVDGGPVDMVEESGLSNIRASPLQVI 252
           +PFG+GRR CP  S AL+++ +T+A LLH F + +     VDM E  GL+N++A+PL+++
Sbjct: 461 VPFGSGRRACPGASLALRVVHLTMARLLHSFNVASPSNQVVDMTESIGLTNLKATPLEIL 520

Query: 251 LTPRLFSQVHD 219
           LTPRL +++++
Sbjct: 521 LTPRLDTKLYE 531

>pir||T04650 cytochrome P450 F10N7.240 - Arabidopsis thaliana
          Length = 501

 Score =  143 bits (361), Expect = 2e-33
 Identities = 67/126 (53%), Positives = 93/126 (73%), Gaps = 1/126 (0%)
 Frame = -2

Query: 611 ESMEDCIVGGYHVPAQTRLLTNISKLQRDPFLYSDPFEFHPERFLT-TYKEVDLKGQHFE 435
           E+MEDC V GY+VP  TRL+ N+ K+QRDP +Y +P EF PERF+T   K+ D++GQ+FE
Sbjct: 370 EAMEDCTVAGYNVPCGTRLIVNVWKIQRDPKVYMEPNEFRPERFITGEAKDFDVRGQNFE 429

Query: 434 LIPFGAGRRMCPAMSFALKLMQMTLATLLHGFEIMTVDGGPVDMVEESGLSNIRASPLQV 255
           L+PFG+GRR CP  S A++++ + LA  LH FE+ TV   PVDM E  GL+  +A+PL+V
Sbjct: 430 LMPFGSGRRSCPGPSLAMQMLHLGLARFLHSFEVKTVLDRPVDMSESPGLTITKATPLEV 489

Query: 254 ILTPRL 237
           ++ PRL
Sbjct: 490 LINPRL 495

  Database: nr
    Posted date:  Apr 1, 2003  2:05 AM
  Number of letters in database: 448,689,247
  Number of sequences in database:  1,393,205
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 520,667,107
Number of Sequences: 1393205
Number of extensions: 11038449
Number of successful extensions: 25665
Number of sequences better than 10.0: 2548
Number of HSP's better than 10.0 without gapping: 23498
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24019
length of database: 448,689,247
effective HSP length: 117
effective length of database: 285,684,262
effective search space used: 24568846532
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)


EST assemble image


clone accession position
1 SPD035d10_f BP046784 1 544
2 MF066f11_f BP031832 86 612




Lotus japonicus
Kazusa DNA Research Institute