KMC018148A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KMC018148A_C01 KMC018148A_c01
gttttttttttttttttttCTACACCCAACAAAACTACATTCTCATATAGAGAGACAAGC
TTAATnTGCGCAAAAATACATGCCCCATGCTGTCAACATGTCATTAACACGATCTTATTT
AAATGCTGCTTAGTGAACTTGCGTTAAAAGTTAATAGGGTTCCACTGGGGCTCTGAATTT
GGAACCAGCATAGACTGCAGCAGAACCAAGTTCCTCCTCAATCCTAAGAAGCTGGTTGTA
CTTGGCAAGCCTTTCAGATCTGCAGGGAGCTCCAGTCTTGATCTGACCCGTTGCTAACCC
AACTGAGAGGTCAGCGATGAAGGTATCCTCAGTTTCACCACTTCGGTGGCTAGCCATGAC
ACCCCAGCCAGCATGCTTAGACATTTTCACAGCTTCAATACTTTCAGTTACACTACCAAT
TTGATTCACCTTCAACAAAAGAGCATTGCAAGATTTTTCTTTAATTGCTTTTTCCACCCG
CTTnGGGTTGGTGACCAGGAGATCATCACCAACAATCTGCACTTGCTGACCAACTTCATC
TGTTAATTTTGCATAGTGCTCCCAGTCATCTTGATCAAATGGATCCTCAATAGACACAAT


Nr search

BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KMC018148A_C01 KMC018148A_c01
         (600 letters)

Database: nr 
           1,393,205 sequences; 448,689,247 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

sp|Q9LEI9|ENO2_HEVBR Enolase 2 (2-phosphoglycerate dehydratase 2...   278  4e-74
sp|Q9LEJ0|ENO1_HEVBR Enolase 1 (2-phosphoglycerate dehydratase 1...   278  4e-74
sp|P42896|ENO_RICCO Enolase (2-phosphoglycerate dehydratase) (2-...   278  5e-74
sp|Q42971|ENO_ORYSA Enolase (2-phosphoglycerate dehydratase) (2-...   276  2e-73
sp|P42895|ENO2_MAIZE Enolase 2 (2-phosphoglycerate dehydratase 2...   275  4e-73

>sp|Q9LEI9|ENO2_HEVBR Enolase 2 (2-phosphoglycerate dehydratase 2) (2-phospho-D-glycerate
           hydro-lyase 2) (Allergen Hev b 9)
           gi|9581746|emb|CAC00533.1| enolase, isoform 2 [Hevea
           brasiliensis]
          Length = 445

 Score =  278 bits (711), Expect = 4e-74
 Identities = 138/149 (92%), Positives = 143/149 (95%)
 Frame = -1

Query: 600 IVSIEDPFDQDDWEHYAKLTDEVGQQVQIVGDDLLVTNPKRVEKAIKEKSCNALLLKVNQ 421
           IVSIEDPFDQDDWEHYAKLT E+G +VQIVGDDLLVTNPKRVEKAIKEK+CNALLLKVNQ
Sbjct: 297 IVSIEDPFDQDDWEHYAKLTSEIGVKVQIVGDDLLVTNPKRVEKAIKEKACNALLLKVNQ 356

Query: 420 IGSVTESIEAVKMSKHAGWGVMASHRSGETEDTFIADLSVGLATGQIKTGAPCRSERLAK 241
           IGSVTESIEAVKMSK AGWGVMASHRSGETEDTFIADLSVGLATGQIKTGAPCRSERLAK
Sbjct: 357 IGSVTESIEAVKMSKRAGWGVMASHRSGETEDTFIADLSVGLATGQIKTGAPCRSERLAK 416

Query: 240 YNQLLRIEEELGSAAVYAGSKFRAPVEPY 154
           YNQLLRIEEELG+ AVYAG+ FR PVEPY
Sbjct: 417 YNQLLRIEEELGAEAVYAGANFRTPVEPY 445

>sp|Q9LEJ0|ENO1_HEVBR Enolase 1 (2-phosphoglycerate dehydratase 1) (2-phospho-D-glycerate
           hydro-lyase 1) (Allergen Hev b 9)
           gi|9581744|emb|CAC00532.1| enolase, isoform 1 [Hevea
           brasiliensis]
          Length = 445

 Score =  278 bits (711), Expect = 4e-74
 Identities = 138/149 (92%), Positives = 143/149 (95%)
 Frame = -1

Query: 600 IVSIEDPFDQDDWEHYAKLTDEVGQQVQIVGDDLLVTNPKRVEKAIKEKSCNALLLKVNQ 421
           IVSIEDPFDQDDW HYAKLT E+G++VQIVGDDLLVTNPKRVEKAIKEK+CNALLLKVNQ
Sbjct: 297 IVSIEDPFDQDDWAHYAKLTSEIGEKVQIVGDDLLVTNPKRVEKAIKEKACNALLLKVNQ 356

Query: 420 IGSVTESIEAVKMSKHAGWGVMASHRSGETEDTFIADLSVGLATGQIKTGAPCRSERLAK 241
           IGSVTESIEAVKMSK AGWGVMASHRSGETEDTFIADLSVGLATGQIKTGAPCRSERLAK
Sbjct: 357 IGSVTESIEAVKMSKRAGWGVMASHRSGETEDTFIADLSVGLATGQIKTGAPCRSERLAK 416

Query: 240 YNQLLRIEEELGSAAVYAGSKFRAPVEPY 154
           YNQLLRIEEELGS AVYAG+ FR PVEPY
Sbjct: 417 YNQLLRIEEELGSEAVYAGANFRKPVEPY 445

>sp|P42896|ENO_RICCO Enolase (2-phosphoglycerate dehydratase) (2-phospho-D-glycerate
           hydro-lyase) gi|542019|pir||S39203 phosphopyruvate
           hydratase (EC 4.2.1.11) - castor bean
           gi|433609|emb|CAA82232.1| enolase [Ricinus communis]
          Length = 445

 Score =  278 bits (710), Expect = 5e-74
 Identities = 136/149 (91%), Positives = 145/149 (97%)
 Frame = -1

Query: 600 IVSIEDPFDQDDWEHYAKLTDEVGQQVQIVGDDLLVTNPKRVEKAIKEKSCNALLLKVNQ 421
           IVSIEDPFDQDDWEHY+KLT E+G++VQIVGDDLLVTNPKRVEKAI+EK+CNALLLKVNQ
Sbjct: 297 IVSIEDPFDQDDWEHYSKLTSEIGEKVQIVGDDLLVTNPKRVEKAIQEKACNALLLKVNQ 356

Query: 420 IGSVTESIEAVKMSKHAGWGVMASHRSGETEDTFIADLSVGLATGQIKTGAPCRSERLAK 241
           IGSVTESIEAV+MSK AGWGVMASHRSGETEDTFIADLSVGLATGQIKTGAPCRSERLAK
Sbjct: 357 IGSVTESIEAVRMSKRAGWGVMASHRSGETEDTFIADLSVGLATGQIKTGAPCRSERLAK 416

Query: 240 YNQLLRIEEELGSAAVYAGSKFRAPVEPY 154
           YNQLLRIEEELG+ AVYAG+KFR PVEPY
Sbjct: 417 YNQLLRIEEELGAEAVYAGAKFRTPVEPY 445

>sp|Q42971|ENO_ORYSA Enolase (2-phosphoglycerate dehydratase) (2-phospho-D-glycerate
           hydro-lyase) (OSE1) gi|7436887|pir||T03267 probable
           phosphopyruvate hydratase (EC 4.2.1.11) - rice
           gi|780372|gb|AAC49173.1| enolase
          Length = 446

 Score =  276 bits (705), Expect = 2e-73
 Identities = 136/149 (91%), Positives = 144/149 (96%)
 Frame = -1

Query: 600 IVSIEDPFDQDDWEHYAKLTDEVGQQVQIVGDDLLVTNPKRVEKAIKEKSCNALLLKVNQ 421
           IVSIEDPFDQDDWEHYAK+T E+G+QVQIVGDDLLVTNP RV KAI+EKSCNALLLKVNQ
Sbjct: 298 IVSIEDPFDQDDWEHYAKMTAEIGEQVQIVGDDLLVTNPTRVAKAIQEKSCNALLLKVNQ 357

Query: 420 IGSVTESIEAVKMSKHAGWGVMASHRSGETEDTFIADLSVGLATGQIKTGAPCRSERLAK 241
           IGSVTESIEAVKMSK AGWGVM SHRSGETEDTFIA+L+VGLATGQIKTGAPCRSERLAK
Sbjct: 358 IGSVTESIEAVKMSKRAGWGVMTSHRSGETEDTFIAELAVGLATGQIKTGAPCRSERLAK 417

Query: 240 YNQLLRIEEELGSAAVYAGSKFRAPVEPY 154
           YNQLLRIEEELG+AAVYAG+KFRAPVEPY
Sbjct: 418 YNQLLRIEEELGAAAVYAGAKFRAPVEPY 446

>sp|P42895|ENO2_MAIZE Enolase 2 (2-phosphoglycerate dehydratase 2) (2-phospho-D-glycerate
           hydro-lyase 2) gi|7436888|pir||T02221 phosphopyruvate
           hydratase (EC 4.2.1.11) - maize gi|602253|gb|AAD04187.1|
           enolase [Zea mays]
          Length = 446

 Score =  275 bits (702), Expect = 4e-73
 Identities = 135/149 (90%), Positives = 143/149 (95%)
 Frame = -1

Query: 600 IVSIEDPFDQDDWEHYAKLTDEVGQQVQIVGDDLLVTNPKRVEKAIKEKSCNALLLKVNQ 421
           IVSIEDPFDQDDW HYAK+T+E+G+QVQIVGDDLLVTNP RV KAIKEKSCNALLLKVNQ
Sbjct: 298 IVSIEDPFDQDDWVHYAKMTEEIGEQVQIVGDDLLVTNPTRVAKAIKEKSCNALLLKVNQ 357

Query: 420 IGSVTESIEAVKMSKHAGWGVMASHRSGETEDTFIADLSVGLATGQIKTGAPCRSERLAK 241
           IGSVTESIEAVKMSK AGWGVM SHRSGETEDTFIADL+VGL+TGQIKTGAPCRSERLAK
Sbjct: 358 IGSVTESIEAVKMSKRAGWGVMTSHRSGETEDTFIADLAVGLSTGQIKTGAPCRSERLAK 417

Query: 240 YNQLLRIEEELGSAAVYAGSKFRAPVEPY 154
           YNQLLRIEEELG+ AVYAG+KFRAPVEPY
Sbjct: 418 YNQLLRIEEELGAIAVYAGAKFRAPVEPY 446

  Database: nr
    Posted date:  Apr 1, 2003  2:05 AM
  Number of letters in database: 448,689,247
  Number of sequences in database:  1,393,205
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 496,454,738
Number of Sequences: 1393205
Number of extensions: 10237082
Number of successful extensions: 23581
Number of sequences better than 10.0: 473
Number of HSP's better than 10.0 without gapping: 22719
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23358
length of database: 448,689,247
effective HSP length: 117
effective length of database: 285,684,262
effective search space used: 23426109484
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)


EST assemble image


clone accession position
1 SPD057e05_f BP048541 1 547
2 SPD025a06_f BP045940 20 601




Lotus japonicus
Kazusa DNA Research Institute