Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC018140A_C02 KMC018140A_c02
(635 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_191315.1| acetylglutamate kinase-like protein; protein id... 225 4e-58
emb|CAC39078.1| acetylglutamate kinase-like protein [Oryza sativa] 224 7e-58
gb|AAM65613.1| acetylglutamate kinase-like protein [Arabidopsis ... 223 1e-57
ref|NP_682198.1| N-acetylglutamate kinase [Thermosynechococcus e... 187 1e-46
ref|ZP_00073134.1| hypothetical protein [Trichodesmium erythraeu... 186 2e-46
>ref|NP_191315.1| acetylglutamate kinase-like protein; protein id: At3g57560.1,
supported by cDNA: 40830., supported by cDNA:
gi_21280876 [Arabidopsis thaliana]
gi|11260723|pir||T46192 acetylglutamate kinase-like
protein - Arabidopsis thaliana
gi|6706427|emb|CAB66113.1| acetylglutamate kinase-like
protein [Arabidopsis thaliana]
gi|14334868|gb|AAK59612.1| putative acetylglutamate
kinase [Arabidopsis thaliana] gi|21280877|gb|AAM44949.1|
putative acetylglutamate kinase [Arabidopsis thaliana]
Length = 347
Score = 225 bits (573), Expect = 4e-58
Identities = 113/141 (80%), Positives = 127/141 (89%)
Frame = -2
Query: 634 GEVARVDPAVLRSLIDSNHIPVVTSVAADESGQPYNINADPVAGELAAALGAEKLILLTD 455
GEVARVDP+VLR L+D +IPV+ SVAAD+SGQ YNINAD VAGELAAALGAEKLILLTD
Sbjct: 207 GEVARVDPSVLRPLVDYGYIPVIASVAADDSGQAYNINADTVAGELAAALGAEKLILLTD 266
Query: 454 VAGILEDRNDPDSLVKKIDIKGVKRMMEDGKVGGGMIPKVNCCVRSLAQGVTTASIIDGR 275
VAGILE++ DP SL+K+IDIKGVK+M+EDGKV GGMIPKV CC+RSLAQGV TASIIDGR
Sbjct: 267 VAGILENKEDPSSLIKEIDIKGVKKMIEDGKVAGGMIPKVKCCIRSLAQGVKTASIIDGR 326
Query: 274 VPHSLLLEILTDEGAGTMITG 212
HSLL EI++DEGAGTMITG
Sbjct: 327 RQHSLLHEIMSDEGAGTMITG 347
>emb|CAC39078.1| acetylglutamate kinase-like protein [Oryza sativa]
Length = 346
Score = 224 bits (571), Expect = 7e-58
Identities = 111/141 (78%), Positives = 126/141 (88%)
Frame = -2
Query: 634 GEVARVDPAVLRSLIDSNHIPVVTSVAADESGQPYNINADPVAGELAAALGAEKLILLTD 455
GEV RV+P+VL +I+S HIPV+ +VAADE+GQ YNINAD AGE+AAALGAEKL+LLTD
Sbjct: 206 GEVTRVNPSVLHPIIESGHIPVIATVAADETGQAYNINADTAAGEIAAALGAEKLLLLTD 265
Query: 454 VAGILEDRNDPDSLVKKIDIKGVKRMMEDGKVGGGMIPKVNCCVRSLAQGVTTASIIDGR 275
V+GIL DRNDP SLVK+IDI GV++M+ DGKVGGGMIPKV CCVR+LAQGV TASIIDGR
Sbjct: 266 VSGILADRNDPGSLVKEIDIAGVRQMVADGKVGGGMIPKVECCVRALAQGVHTASIIDGR 325
Query: 274 VPHSLLLEILTDEGAGTMITG 212
VPHSLLLEILTDEG GTMITG
Sbjct: 326 VPHSLLLEILTDEGTGTMITG 346
>gb|AAM65613.1| acetylglutamate kinase-like protein [Arabidopsis thaliana]
Length = 347
Score = 223 bits (569), Expect = 1e-57
Identities = 112/141 (79%), Positives = 126/141 (88%)
Frame = -2
Query: 634 GEVARVDPAVLRSLIDSNHIPVVTSVAADESGQPYNINADPVAGELAAALGAEKLILLTD 455
GEVARVDP+VLR L+D +IPV+ SVAAD+SGQ YNINAD VAGELAAALGAEKLILLTD
Sbjct: 207 GEVARVDPSVLRPLVDYGYIPVIASVAADDSGQAYNINADTVAGELAAALGAEKLILLTD 266
Query: 454 VAGILEDRNDPDSLVKKIDIKGVKRMMEDGKVGGGMIPKVNCCVRSLAQGVTTASIIDGR 275
VAGILE++ DP L+K+IDIKGVK+M+EDGKV GGMIPKV CC+RSLAQGV TASIIDGR
Sbjct: 267 VAGILENKEDPSXLIKEIDIKGVKKMIEDGKVAGGMIPKVKCCIRSLAQGVKTASIIDGR 326
Query: 274 VPHSLLLEILTDEGAGTMITG 212
HSLL EI++DEGAGTMITG
Sbjct: 327 RQHSLLHEIMSDEGAGTMITG 347
>ref|NP_682198.1| N-acetylglutamate kinase [Thermosynechococcus elongatus BP-1]
gi|28376878|sp|P59303|ARGB_SYNEL Acetylglutamate kinase
(NAG kinase) (AGK) (N-acetyl-L-glutamate
5-phosphotransferase) gi|22295132|dbj|BAC08960.1|
N-acetylglutamate kinase [Thermosynechococcus elongatus
BP-1]
Length = 295
Score = 187 bits (475), Expect = 1e-46
Identities = 91/141 (64%), Positives = 113/141 (79%)
Frame = -2
Query: 634 GEVARVDPAVLRSLIDSNHIPVVTSVAADESGQPYNINADPVAGELAAALGAEKLILLTD 455
GEV VD V+ +L++ +IPV++SVAAD++GQ YNINAD VAGE+AAALGAEKLILLTD
Sbjct: 144 GEVQGVDTRVITALVEKGYIPVISSVAADDTGQAYNINADTVAGEIAAALGAEKLILLTD 203
Query: 454 VAGILEDRNDPDSLVKKIDIKGVKRMMEDGKVGGGMIPKVNCCVRSLAQGVTTASIIDGR 275
AGIL D DP +L+ ++DI +++++DG V GGMIPKV CCVRSLAQGV A IIDGR
Sbjct: 204 TAGILRDYRDPSTLIYRLDIAEARQLIKDGVVSGGMIPKVTCCVRSLAQGVKAAHIIDGR 263
Query: 274 VPHSLLLEILTDEGAGTMITG 212
VPH+LLLEI TD G G+M+ G
Sbjct: 264 VPHALLLEIFTDSGIGSMLVG 284
>ref|ZP_00073134.1| hypothetical protein [Trichodesmium erythraeum IMS101]
Length = 292
Score = 186 bits (472), Expect = 2e-46
Identities = 93/139 (66%), Positives = 113/139 (80%)
Frame = -2
Query: 634 GEVARVDPAVLRSLIDSNHIPVVTSVAADESGQPYNINADPVAGELAAALGAEKLILLTD 455
GEV+ V +L+SL+D+ +IPVV+SVA DE GQ YN+NAD VAGE+AAA+ AEKLILLTD
Sbjct: 152 GEVSNVKIDILQSLVDNGYIPVVSSVATDEQGQAYNLNADTVAGEIAAAMEAEKLILLTD 211
Query: 454 VAGILEDRNDPDSLVKKIDIKGVKRMMEDGKVGGGMIPKVNCCVRSLAQGVTTASIIDGR 275
AGILED ++PDSL+ K+DI+ + ++E G V GGMIPKVNCCVRSLAQGV A I+DGR
Sbjct: 212 TAGILEDYHNPDSLIVKLDIQEARELIEKGIVSGGMIPKVNCCVRSLAQGVRAAHILDGR 271
Query: 274 VPHSLLLEILTDEGAGTMI 218
VPH LL EILTD G G+MI
Sbjct: 272 VPHVLLQEILTDTGVGSMI 290
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 620,435,256
Number of Sequences: 1393205
Number of extensions: 16515007
Number of successful extensions: 176801
Number of sequences better than 10.0: 3481
Number of HSP's better than 10.0 without gapping: 80344
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 129852
length of database: 448,689,247
effective HSP length: 118
effective length of database: 284,291,057
effective search space used: 26439068301
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
