>KMC018101A_C01 KMC018101A_c01
tacaatagctttcgatggatatgctgcatctcccaatgctcaagcaagttagacacatat
gagtcattataagattcttcTAAAATGTATTTTACTACCTTGCACTCTATCTACTCAATT
TAACGTAATCACAACAAAATTACTCTGCCCTCTACCTGAATCTCCACACAAACGGTTAAA
TGTTCCAAATCAGTAAATCAGCAAACATCTTTCCAGATAATGGAACGATTATTCTTTAGT
CTACAAGGGGAAGTCGTTTCAAGCAAATCATCTAACTACTTTCTGACCAATAAAAGGTTA
TCTGCAGCTCAAACTCAATTAAACCTTCAAAAGCTGCATCTTGTTCGCAAAAGCAACCGC
AATCCAATCCGGCTGAGCCGCAGGCCACTGCAGCTGGTTAATCTCACAACCAGCAGAATA
CATGAACATAGGGTCAATCCCATTAGGTCCAGCCACAGTAGGCAACTCCCAAATAAGAGC
CTGAGAATCATCCCCAGCAGAACAAATATGCTTCGAGCTCCGAGGAGCCCAAGCAATGGC
ATTGACACACGAACGGTGCCTCTCCAACTCCGCCACCGGCATGGTCGGCGACCTAATATC
CAATATCACAACCTTATTGCTGTCCATCAAGATAGTAGCCATGTACCTCAAATCCTGCTT
GTTCCAAGCCAAACGGAGCAAAG

BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KMC018101A_C01 KMC018101A_c01
         (683 letters)

Database: nr 
           1,393,205 sequences; 448,689,247 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

gb|AAF27919.1|AF220203_1 Ttg1-like protein [Malus x domestica]        224  7e-58
dbj|BAB58883.1| putative regulatory protein in anthocyanin biosy...   224  1e-57
ref|NP_197840.1| Ttg1 protein (emb CAB45372.1); protein id: At5g...   219  2e-56
emb|CAC10524.1| transparent testa glabra 1 [Arabidopsis thaliana]     219  2e-56
gb|AAM95645.1| WD-repeat protein GhTTG3 [Gossypium hirsutum]          216  2e-55

>gb|AAF27919.1|AF220203_1 Ttg1-like protein [Malus x domestica]
          Length = 342

 Score =  224 bits (572), Expect = 7e-58
 Identities = 107/120 (89%), Positives = 114/120 (94%)
 Frame = -3

Query: 681 LLRLAWNKQDLRYMATILMDSNKVVILDIRSPTMPVAELERHRSCVNAIAWAPRSSKHIC 502
           LLRLAWNKQDLRYMATILMDSNKVVILDIRSPTMPVAELERHR  VNAIAWAP+S +HIC
Sbjct: 223 LLRLAWNKQDLRYMATILMDSNKVVILDIRSPTMPVAELERHRGSVNAIAWAPQSCRHIC 282

Query: 501 SAGDDSQALIWELPTVAGPNGIDPMFMYSAGCEINQLQWPAAQPDWIAVAFANKMQLLKV 322
           SAGDD+QALIW+LPTVAGPNGIDPM MYSAG EINQLQW AAQPDWI++AF+NKMQLLKV
Sbjct: 283 SAGDDTQALIWDLPTVAGPNGIDPMSMYSAGAEINQLQWSAAQPDWISIAFSNKMQLLKV 342

>dbj|BAB58883.1| putative regulatory protein in anthocyanin biosynthesis [Perilla
           frutescens]
          Length = 333

 Score =  224 bits (570), Expect = 1e-57
 Identities = 106/120 (88%), Positives = 113/120 (93%)
 Frame = -3

Query: 681 LLRLAWNKQDLRYMATILMDSNKVVILDIRSPTMPVAELERHRSCVNAIAWAPRSSKHIC 502
           LLRLAWNKQDLRYMATILMDSNK+VILDIRSPTMPVAELERH + VNAIAWAP+S KHIC
Sbjct: 214 LLRLAWNKQDLRYMATILMDSNKIVILDIRSPTMPVAELERHSASVNAIAWAPQSCKHIC 273

Query: 501 SAGDDSQALIWELPTVAGPNGIDPMFMYSAGCEINQLQWPAAQPDWIAVAFANKMQLLKV 322
           SAGDD Q+L+WELPTVAGPNGIDPM MYSAG EINQLQW AAQPDWIA+AFANKMQ+LKV
Sbjct: 274 SAGDDGQSLLWELPTVAGPNGIDPMTMYSAGAEINQLQWSAAQPDWIAIAFANKMQMLKV 333

>ref|NP_197840.1| Ttg1 protein (emb CAB45372.1); protein id: At5g24520.1 [Arabidopsis
           thaliana] gi|27151711|sp|Q9XGN1|TTG1_ARATH TRANSPARENT
           TESTA GLABRA 1 protein (TTG1 protein)
           gi|5123716|emb|CAB45372.1| Ttg1 protein [Arabidopsis
           thaliana] gi|10177852|dbj|BAB11204.1| Ttg1 protein
           [Arabidopsis thaliana] gi|10636049|emb|CAC10523.1|
           transparent testa glabra 1 protein [Arabidopsis
           thaliana]
          Length = 341

 Score =  219 bits (559), Expect = 2e-56
 Identities = 104/120 (86%), Positives = 113/120 (93%)
 Frame = -3

Query: 681 LLRLAWNKQDLRYMATILMDSNKVVILDIRSPTMPVAELERHRSCVNAIAWAPRSSKHIC 502
           LLRLAWNKQDLRYMATILMDSNKVVILDIRSPTMPVAELERH++ VNAIAWAP+S KHIC
Sbjct: 222 LLRLAWNKQDLRYMATILMDSNKVVILDIRSPTMPVAELERHQASVNAIAWAPQSCKHIC 281

Query: 501 SAGDDSQALIWELPTVAGPNGIDPMFMYSAGCEINQLQWPAAQPDWIAVAFANKMQLLKV 322
           S GDD+QALIWELPTVAGPNGIDPM +YSAG EINQLQW ++QPDWI +AFANKMQLL+V
Sbjct: 282 SGGDDTQALIWELPTVAGPNGIDPMSVYSAGSEINQLQWSSSQPDWIGIAFANKMQLLRV 341

>emb|CAC10524.1| transparent testa glabra 1 [Arabidopsis thaliana]
          Length = 341

 Score =  219 bits (559), Expect = 2e-56
 Identities = 104/120 (86%), Positives = 113/120 (93%)
 Frame = -3

Query: 681 LLRLAWNKQDLRYMATILMDSNKVVILDIRSPTMPVAELERHRSCVNAIAWAPRSSKHIC 502
           LLRLAWNKQDLRYMATILMDSNKVVILDIRSPTMPVAELERH++ VNAIAWAP+S KHIC
Sbjct: 222 LLRLAWNKQDLRYMATILMDSNKVVILDIRSPTMPVAELERHQASVNAIAWAPQSCKHIC 281

Query: 501 SAGDDSQALIWELPTVAGPNGIDPMFMYSAGCEINQLQWPAAQPDWIAVAFANKMQLLKV 322
           S GDD+QALIWELPTVAGPNGIDPM +YSAG EINQLQW ++QPDWI +AFANKMQLL+V
Sbjct: 282 SGGDDTQALIWELPTVAGPNGIDPMSVYSAGSEINQLQWSSSQPDWIGIAFANKMQLLRV 341

>gb|AAM95645.1| WD-repeat protein GhTTG3 [Gossypium hirsutum]
          Length = 345

 Score =  216 bits (550), Expect = 2e-55
 Identities = 103/120 (85%), Positives = 112/120 (92%)
 Frame = -3

Query: 681 LLRLAWNKQDLRYMATILMDSNKVVILDIRSPTMPVAELERHRSCVNAIAWAPRSSKHIC 502
           LLRLAWNKQDL+YMATI MDSNKVVILDIRSPT PVAELERH + VNAIAWAP+S KHIC
Sbjct: 226 LLRLAWNKQDLKYMATIQMDSNKVVILDIRSPTTPVAELERHHASVNAIAWAPQSCKHIC 285

Query: 501 SAGDDSQALIWELPTVAGPNGIDPMFMYSAGCEINQLQWPAAQPDWIAVAFANKMQLLKV 322
           SAGDD+QALIWELPTVAGPNGIDP+ +YSAG EINQLQW AAQPDWIA+AF+NK+QLLKV
Sbjct: 286 SAGDDTQALIWELPTVAGPNGIDPLCVYSAGYEINQLQWSAAQPDWIAIAFSNKLQLLKV 345

  Database: nr
    Posted date:  Apr 1, 2003  2:05 AM
  Number of letters in database: 448,689,247
  Number of sequences in database:  1,393,205
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 592,982,713
Number of Sequences: 1393205
Number of extensions: 12987464
Number of successful extensions: 38613
Number of sequences better than 10.0: 374
Number of HSP's better than 10.0 without gapping: 36196
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 38405
length of database: 448,689,247
effective HSP length: 119
effective length of database: 282,897,852
effective search space used: 30552968016
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

EST assemble image

clone accession position 1 MF004c08_f BP028436 1 480 2 SPD020g05_f BP045600 181 683

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