Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC018064A_C01 KMC018064A_c01
(603 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_201174.1| unknown protein; protein id: At5g63690.1 [Arabi... 194 7e-49
dbj|BAC15806.1| hypothetical protein~similar to Arabidopsis thal... 162 3e-39
dbj|BAC15808.1| hypothetical protein~similar to Arabidopsis thal... 162 4e-39
gb|EAA09404.1| agCP15005 [Anopheles gambiae str. PEST] 74 1e-12
ref|NP_076973.1| hypothetical protein MGC2731 [Homo sapiens] gi|... 72 4e-12
>ref|NP_201174.1| unknown protein; protein id: At5g63690.1 [Arabidopsis thaliana]
gi|10177050|dbj|BAB10462.1| gene_id:MBK5.17~unknown
protein [Arabidopsis thaliana]
Length = 139
Score = 194 bits (493), Expect = 7e-49
Identities = 92/137 (67%), Positives = 111/137 (80%), Gaps = 1/137 (0%)
Frame = -1
Query: 492 ILLKDIVPAAQNNIDTKFIVLEKGMTTLEGQNKVCLALVADETAAVHFQLWGDECDVFDL 313
+ LKDIVPAAQNNIDT+FI+L+K ++ C+AL ADETAAVH QLWGDECD F+
Sbjct: 3 LFLKDIVPAAQNNIDTRFIILDKAKSSAANGKNYCIALAADETAAVHIQLWGDECDAFEA 62
Query: 312 GDIICLTNGIFSYQRNN-LLLRAGKRGKLVKIGEFTMSYVETPNMSEIHWIPDPNNSRTY 136
GDI+ LTNGIFSY RN+ L+LRAGKRGK+ K+GEFT+++VETPN+SEI WIPDP N + Y
Sbjct: 63 GDIVKLTNGIFSYVRNSGLILRAGKRGKMEKMGEFTVAFVETPNISEIQWIPDPENPKRY 122
Query: 135 IQEHVVSPHSRIFPPNP 85
IQ VVS +SRIFPP P
Sbjct: 123 IQSGVVSAYSRIFPPLP 139
>dbj|BAC15806.1| hypothetical protein~similar to Arabidopsis thaliana chromosome5,
At5g63690 [Oryza sativa (japonica cultivar-group)]
gi|22830944|dbj|BAC15809.1| hypothetical protein~similar
to Arabidopsis thaliana chromosome5, At5g63690 [Oryza
sativa (japonica cultivar-group)]
gi|22830945|dbj|BAC15810.1| hypothetical protein~similar
to Arabidopsis thaliana chromosome5, At5g63690 [Oryza
sativa (japonica cultivar-group)]
gi|23617214|dbj|BAC20885.1| hypothetical protein~similar
to Arabidopsis thaliana chromosome5, At5g63690 [Oryza
sativa (japonica cultivar-group)]
gi|23617217|dbj|BAC20888.1| hypothetical protein~similar
to Arabidopsis thaliana chromosome5, At5g63690 [Oryza
sativa (japonica cultivar-group)]
Length = 164
Score = 162 bits (410), Expect = 3e-39
Identities = 81/148 (54%), Positives = 103/148 (68%), Gaps = 9/148 (6%)
Frame = -1
Query: 507 N*SXMILLKDIVPAAQNNIDTKFIVLEKGMTT--------LEGQNKVCLALVADETAAVH 352
N + LKD+ PAA NN++T FIVL+K + + + CLALVADETAA H
Sbjct: 15 NSGSTVKLKDLAPAATNNVNTTFIVLDKAARAPPPPPHGRADAREETCLALVADETAAAH 74
Query: 351 FQLWGDECDVFDLGDIICLTNGIFSYQRNN-LLLRAGKRGKLVKIGEFTMSYVETPNMSE 175
F LWG E D F+ GDI+ LT GIFSY R+N L+LRAG+RG+ K+GEFTM +VETPNMSE
Sbjct: 75 FLLWGAERDAFEPGDIVRLTGGIFSYHRSNSLVLRAGRRGRAEKVGEFTMLFVETPNMSE 134
Query: 174 IHWIPDPNNSRTYIQEHVVSPHSRIFPP 91
+ W+ DP + R +QE VVSPHS++F P
Sbjct: 135 VKWVRDPGDPRRMVQEAVVSPHSQVFKP 162
>dbj|BAC15808.1| hypothetical protein~similar to Arabidopsis thaliana chromosome5,
At5g63690 [Oryza sativa (japonica cultivar-group)]
gi|23617216|dbj|BAC20887.1| hypothetical protein~similar
to Arabidopsis thaliana chromosome5, At5g63690 [Oryza
sativa (japonica cultivar-group)]
Length = 164
Score = 162 bits (409), Expect = 4e-39
Identities = 80/143 (55%), Positives = 102/143 (70%), Gaps = 9/143 (6%)
Frame = -1
Query: 492 ILLKDIVPAAQNNIDTKFIVLEKGMTT--------LEGQNKVCLALVADETAAVHFQLWG 337
+ LKD+ PAA NN++T FIVL+K + + + CLALVADETAA HF LWG
Sbjct: 20 VKLKDLAPAATNNVNTTFIVLDKAARAPPPPPHGRADAREETCLALVADETAAAHFLLWG 79
Query: 336 DECDVFDLGDIICLTNGIFSYQRNN-LLLRAGKRGKLVKIGEFTMSYVETPNMSEIHWIP 160
E D F+ GDI+ LT GIFSY R+N L+LRAG+RG+ K+GEFTM +VETPNMSE+ W+
Sbjct: 80 AERDAFEPGDIVRLTGGIFSYHRSNSLVLRAGRRGRAEKVGEFTMLFVETPNMSEVKWVR 139
Query: 159 DPNNSRTYIQEHVVSPHSRIFPP 91
DP + R +QE VVSPHS++F P
Sbjct: 140 DPGDPRRMVQEAVVSPHSQVFKP 162
>gb|EAA09404.1| agCP15005 [Anopheles gambiae str. PEST]
Length = 266
Score = 74.3 bits (181), Expect = 1e-12
Identities = 45/120 (37%), Positives = 72/120 (59%), Gaps = 1/120 (0%)
Frame = -1
Query: 507 N*SXMILLKDIVPAAQNNIDTKFIVLEKGMTTLEGQNK-VCLALVADETAAVHFQLWGDE 331
N + ++ +KDI P +N I+ FI+LE G TL +N+ V VAD++AA++ +W +
Sbjct: 41 NPTDLMAIKDIYPGMKN-INVIFIILEIGPVTLTKENREVRTFKVADQSAAINVSIWDEP 99
Query: 330 CDVFDLGDIICLTNGIFSYQRNNLLLRAGKRGKLVKIGEFTMSYVETPNMSEIHWIPDPN 151
GDI+ LT G + R +L L +GK G++V++G+F ++ E NMSE P+PN
Sbjct: 100 GKQLLPGDIVRLTKGYANVWRQSLTLYSGKNGEIVRLGDFCYTFNEMVNMSE----PNPN 155
>ref|NP_076973.1| hypothetical protein MGC2731 [Homo sapiens]
gi|12654499|gb|AAH01079.1|AAH01079 Unknown (protein for
MGC:2731) [Homo sapiens]
gi|13544080|gb|AAH06171.1|AAH06171 hypothetical protein
MGC2731 [Homo sapiens]
Length = 211
Score = 72.4 bits (176), Expect = 4e-12
Identities = 47/115 (40%), Positives = 65/115 (55%), Gaps = 1/115 (0%)
Frame = -1
Query: 486 LKDIVPAAQNNIDTKFIVLEKG-MTTLEGQNKVCLALVADETAAVHFQLWGDECDVFDLG 310
+KDI P +N ++ FIVLE G +T + ++V VAD+T +++ +W D ++ G
Sbjct: 7 VKDIKPGLKN-LNLIFIVLETGRVTKTKDGHEVRTCKVADKTGSINISVWDDVGNLIQPG 65
Query: 309 DIICLTNGIFSYQRNNLLLRAGKRGKLVKIGEFTMSYVETPNMSEIHWIPDPNNS 145
DII LT G S + L L G+ G L KIGEF M Y E PN SE P+P S
Sbjct: 66 DIIRLTKGYASVFKGCLTLYTGRGGDLQKIGEFCMVYSEVPNFSE----PNPEYS 116
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 501,576,644
Number of Sequences: 1393205
Number of extensions: 10693573
Number of successful extensions: 27381
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 26449
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27342
length of database: 448,689,247
effective HSP length: 117
effective length of database: 285,684,262
effective search space used: 23711793746
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
