>KMC018030A_C01 KMC018030A_c01
agaacaaactaaaaatggattaatgataactggtctaacaacaaaagcttaatataatca
tacatcacaccagcaatagaTCCTGATTCCGATTGGTGGGTCCACTCAACCCTACACTCA
AAGCTCAAGGCTTTTACCCGTTGGGTTGTGGGCCACACCATCTCCCTACCCCAACGACTA
CACCACCCAATCACCTATCCTCTTAACTGTTCTGGTGATCTTCAAAATCAATCTCACACA
CCTCAAATCACTTGATGAACTACAGTTACTTAGTTACATTACAATTACAATTTCAGTGAC
CCTTTTTCCCTTCACACCAAACAAAAGTAGAATGTGAATAAGGGAACGTCTGTCGTCTGC
ATATCAATGGAGTTAACGCAAAATCACTTTCATCTCAATCCACCATACTAGTTGAGTTAA
CGCAAAAACACTTTCATCTCAATCCACCAGTTGAGTTCTAGTCACTTTGGCTTCGAAGTG
ATTCTGCTTTGAAATGAGTGCTAACACCGGTTAGCATAATGCTAATTAGTATCCAAACAT
ACCCTAAGCATTTTCTTCACTCCAACAACATTCCCAGAAAGCCAAAATCAAGCATTTTCA
TCTCATCnTGTTCCTGCTGAGTTAAATCCTGGTTGCTTCTGCTCTTGAACAAACCACTGT
ACATATATAAATTAAAGACCACCTTGCTATTCCTAACCTTTAATCCTATAAACTAAGTGG
GTAAAAACCACTGTAATCATATCTATATATAGAAATTAAAAAAACTAAGTGGGTGAATGA
TAAATCTGACTTAGTAATAGTCTAGTCAGTGGAGTACAATCCTCTGG

BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KMC018030A_C01 KMC018030A_c01
         (827 letters)

Database: nr 
           1,393,205 sequences; 448,689,247 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

dbj|BAB56016.1| putative (1-4)-beta-mannan endohydrolase [Oryza ...    32  8.7

>dbj|BAB56016.1| putative (1-4)-beta-mannan endohydrolase [Oryza sativa (japonica
           cultivar-group)] gi|21902051|dbj|BAC05600.1| putative
           (1-4)-beta-mannan endohydrolase [Oryza sativa (japonica
           cultivar-group)]
          Length = 445

 Score = 32.3 bits (72), Expect = 8.7
 Identities = 18/65 (27%), Positives = 30/65 (45%), Gaps = 5/65 (7%)
 Frame = +1

Query: 13  KWINDNWS-----NNKSLI*SYITPAIDPDSDWWVHSTLHSKLKAFTRWVVGHTISLPQR 177
           +W  +N+      N+K     + +  + PD+ W  H++L  KLK  TRW+  H       
Sbjct: 282 EWFPNNYGADFIRNSKIQDIDFASVHVYPDN-WLQHASLDEKLKFMTRWITAHVEDGDGE 340

Query: 178 LHHPI 192
           L  P+
Sbjct: 341 LEKPV 345

  Database: nr
    Posted date:  Apr 1, 2003  2:05 AM
  Number of letters in database: 448,689,247
  Number of sequences in database:  1,393,205
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 674,748,434
Number of Sequences: 1393205
Number of extensions: 14106508
Number of successful extensions: 32395
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 31183
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32377
length of database: 448,689,247
effective HSP length: 122
effective length of database: 278,718,237
effective search space used: 42643890261
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

EST assemble image

clone accession position 1 SPD082g04_f BP050572 1 490 2 SPD015b09_f BP045169 378 827

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