Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC018015A_C01 KMC018015A_c01
(480 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAF89209.1|AF279252_1 cytochrome P450 [Vigna radiata] 220 7e-57
ref|NP_196188.1| cytochrome p450, putative; protein id: At5g0569... 203 7e-52
pir||T04602 cytochrome P450 homolog F23E13.220 - Arabidopsis tha... 126 1e-28
pir||D85429 cytochrome P450 like protein [imported] - Arabidopsi... 126 1e-28
sp|Q9M066|C90C_ARATH Cytochrome P450 90C1 (ROTUNDIFOLIA3) gi|417... 126 1e-28
>gb|AAF89209.1|AF279252_1 cytochrome P450 [Vigna radiata]
Length = 474
Score = 220 bits (560), Expect = 7e-57
Identities = 99/115 (86%), Positives = 109/115 (94%)
Frame = +1
Query: 1 NIKGYTIPKGWKVFASFRAVHLNPDHFKDARTFNPWRWQKSNSEATSPGNVYTPFGGGPR 180
+IKGYTIPKGWKVFASFRAVHLNP+++KDARTFNPWRWQ ++SEA +P NVYTPFGGGPR
Sbjct: 358 DIKGYTIPKGWKVFASFRAVHLNPEYYKDARTFNPWRWQSNSSEAANPANVYTPFGGGPR 417
Query: 181 LCPGYELARVVLSVFLHQIVTRYSWYPAEEDKLVFFPTTRTQKRYPIIVKRRGVS 345
LCPGYELARVVLSVFLH+IVTR+SW PAEEDKLVFFPTTRTQKRYPIIVKRR +
Sbjct: 418 LCPGYELARVVLSVFLHRIVTRFSWVPAEEDKLVFFPTTRTQKRYPIIVKRRNAN 472
>ref|NP_196188.1| cytochrome p450, putative; protein id: At5g05690.1, supported by
cDNA: 36334., supported by cDNA: gi_14596098, supported
by cDNA: gi_15450716, supported by cDNA: gi_17380617,
supported by cDNA: gi_20148302 [Arabidopsis thaliana]
gi|5915851|sp|Q42569|C901_ARATH Cytochrome P450 90A1
gi|1076315|pir||S55379 cytochrome P450 CYP90 -
Arabidopsis thaliana gi|853719|emb|CAA60793.1| CYP90
protein [Arabidopsis thaliana] gi|871988|emb|CAA60794.1|
CYP90 protein [Arabidopsis thaliana]
gi|9759094|dbj|BAB09663.1| cytochrome P450 90A1
[Arabidopsis thaliana] gi|14596099|gb|AAK68777.1|
cytochrome P450 90A1 [Arabidopsis thaliana]
gi|15450717|gb|AAK96630.1| AT5g05690/MJJ3_9 [Arabidopsis
thaliana] gi|17380618|gb|AAL36072.1| AT5g05690/MJJ3_9
[Arabidopsis thaliana] gi|20148303|gb|AAM10042.1|
cytochrome P450 90A1 [Arabidopsis thaliana]
gi|21593119|gb|AAM65068.1| cytochrome P450 90A1
[Arabidopsis thaliana]
Length = 472
Score = 203 bits (517), Expect = 7e-52
Identities = 93/111 (83%), Positives = 101/111 (90%)
Frame = +1
Query: 4 IKGYTIPKGWKVFASFRAVHLNPDHFKDARTFNPWRWQKSNSEATSPGNVYTPFGGGPRL 183
IKGY IPKGWKVF+SFRAVHL+P+HFKDARTFNPWRWQ SNS T P NV+TPFGGGPRL
Sbjct: 359 IKGYKIPKGWKVFSSFRAVHLDPNHFKDARTFNPWRWQ-SNSVTTGPSNVFTPFGGGPRL 417
Query: 184 CPGYELARVVLSVFLHQIVTRYSWYPAEEDKLVFFPTTRTQKRYPIIVKRR 336
CPGYELARV LSVFLH++VT +SW PAE+DKLVFFPTTRTQKRYPI VKRR
Sbjct: 418 CPGYELARVALSVFLHRLVTGFSWVPAEQDKLVFFPTTRTQKRYPIFVKRR 468
>pir||T04602 cytochrome P450 homolog F23E13.220 - Arabidopsis thaliana
gi|2961392|emb|CAA18139.1| cytochrome P450 like protein
(fragment) [Arabidopsis thaliana]
Length = 255
Score = 126 bits (316), Expect = 1e-28
Identities = 59/108 (54%), Positives = 78/108 (71%)
Frame = +1
Query: 4 IKGYTIPKGWKVFASFRAVHLNPDHFKDARTFNPWRWQKSNSEATSPGNVYTPFGGGPRL 183
IKGY IPKGW V ASF +VH++ D + + F+PWRW + N A S +TPFGGG RL
Sbjct: 135 IKGYLIPKGWCVLASFISVHMDEDIYDNPYQFDPWRWDRINGSANS-SICFTPFGGGQRL 193
Query: 184 CPGYELARVVLSVFLHQIVTRYSWYPAEEDKLVFFPTTRTQKRYPIIV 327
CPG EL+++ +S+FLH +VTRYSW AEED++V FPT + ++R PI V
Sbjct: 194 CPGLELSKLEISIFLHHLVTRYSW-TAEEDEIVSFPTVKMKRRLPIRV 240
>pir||D85429 cytochrome P450 like protein [imported] - Arabidopsis thaliana
gi|4006922|emb|CAB16850.1| cytochrome P450 like protein
[Arabidopsis thaliana] gi|7270586|emb|CAB80304.1|
cytochrome P450 like protein [Arabidopsis thaliana]
Length = 457
Score = 126 bits (316), Expect = 1e-28
Identities = 59/108 (54%), Positives = 78/108 (71%)
Frame = +1
Query: 4 IKGYTIPKGWKVFASFRAVHLNPDHFKDARTFNPWRWQKSNSEATSPGNVYTPFGGGPRL 183
IKGY IPKGW V ASF +VH++ D + + F+PWRW + N A S +TPFGGG RL
Sbjct: 337 IKGYLIPKGWCVLASFISVHMDEDIYDNPYQFDPWRWDRINGSANS-SICFTPFGGGQRL 395
Query: 184 CPGYELARVVLSVFLHQIVTRYSWYPAEEDKLVFFPTTRTQKRYPIIV 327
CPG EL+++ +S+FLH +VTRYSW AEED++V FPT + ++R PI V
Sbjct: 396 CPGLELSKLEISIFLHHLVTRYSW-TAEEDEIVSFPTVKMKRRLPIRV 442
>sp|Q9M066|C90C_ARATH Cytochrome P450 90C1 (ROTUNDIFOLIA3) gi|4176420|dbj|BAA37167.1|
cytochrome P450 [Arabidopsis thaliana]
Length = 524
Score = 126 bits (316), Expect = 1e-28
Identities = 59/108 (54%), Positives = 78/108 (71%)
Frame = +1
Query: 4 IKGYTIPKGWKVFASFRAVHLNPDHFKDARTFNPWRWQKSNSEATSPGNVYTPFGGGPRL 183
IKGY IPKGW V ASF +VH++ D + + F+PWRW + N A S +TPFGGG RL
Sbjct: 404 IKGYLIPKGWCVLASFISVHMDEDIYDNPYQFDPWRWDRINGSANS-SICFTPFGGGQRL 462
Query: 184 CPGYELARVVLSVFLHQIVTRYSWYPAEEDKLVFFPTTRTQKRYPIIV 327
CPG EL+++ +S+FLH +VTRYSW AEED++V FPT + ++R PI V
Sbjct: 463 CPGLELSKLEISIFLHHLVTRYSW-TAEEDEIVSFPTVKMKRRLPIRV 509
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 410,169,417
Number of Sequences: 1393205
Number of extensions: 9007425
Number of successful extensions: 28768
Number of sequences better than 10.0: 2628
Number of HSP's better than 10.0 without gapping: 26435
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27328
length of database: 448,689,247
effective HSP length: 113
effective length of database: 291,257,082
effective search space used: 13397825772
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
