Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC017954A_C01 KMC017954A_c01
(565 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_199039.1| serine carboxypeptidase II-like; protein id: At... 181 6e-45
ref|NP_175046.1| serine carboxypeptidase II, putative; protein i... 178 4e-44
gb|AAO42304.1| putative serine carboxypeptidase II [Arabidopsis ... 176 2e-43
ref|NP_178937.1| putative serine carboxypeptidase II; protein id... 176 2e-43
ref|NP_199038.1| serine carboxypeptidase-II like; protein id: At... 165 3e-40
>ref|NP_199039.1| serine carboxypeptidase II-like; protein id: At5g42240.1, supported
by cDNA: gi_13605556 [Arabidopsis thaliana]
gi|10177009|dbj|BAB10197.1| serine carboxypeptidase
II-like [Arabidopsis thaliana]
gi|13605557|gb|AAK32772.1|AF361604_1 AT5g42240/K5J14_4
[Arabidopsis thaliana] gi|23505957|gb|AAN28838.1|
At5g42240/K5J14_4 [Arabidopsis thaliana]
Length = 473
Score = 181 bits (459), Expect = 6e-45
Identities = 85/115 (73%), Positives = 95/115 (81%)
Frame = -2
Query: 558 INILPILKRIVKNHIPVWVFSGDQDSVVPLLGSRTLIRELAHELQYKVTVPYGAWFHQGQ 379
I++LPILKRI+ N P+W+FSGDQDSVVP GSRTL+RELA +L +K TVPYGAWFH+ Q
Sbjct: 359 IDMLPILKRIILNKTPIWIFSGDQDSVVPFGGSRTLVRELAQDLNFKTTVPYGAWFHKSQ 418
Query: 378 VGGWVTEYGNLLTFAPVRGAAHMVPYAQPSRALGLFSAFVRGSRLPNTTRPSIDE 214
VGGW EYG LLTFA VRGAAHMVPYAQPSRAL LFS+FV G RLPN T S DE
Sbjct: 419 VGGWAIEYGKLLTFATVRGAAHMVPYAQPSRALHLFSSFVSGRRLPNNTHSSTDE 473
>ref|NP_175046.1| serine carboxypeptidase II, putative; protein id: At1g43780.1
[Arabidopsis thaliana] gi|25289787|pir||G96501 probable
serine carboxypeptidases [imported] - Arabidopsis
thaliana gi|7523661|gb|AAF63101.1|AC006423_2 Putative
serine carboxypeptidases [Arabidopsis thaliana]
Length = 479
Score = 178 bits (452), Expect = 4e-44
Identities = 81/114 (71%), Positives = 100/114 (87%)
Frame = -2
Query: 555 NILPILKRIVKNHIPVWVFSGDQDSVVPLLGSRTLIRELAHELQYKVTVPYGAWFHQGQV 376
N+LPILKRIVK+ +PVWVFSGD+DSV+PLLGSRTL++ELA +L + TVPYGAWF +GQV
Sbjct: 366 NMLPILKRIVKSKVPVWVFSGDEDSVIPLLGSRTLVKELADDLNFNTTVPYGAWFDKGQV 425
Query: 375 GGWVTEYGNLLTFAPVRGAAHMVPYAQPSRALGLFSAFVRGSRLPNTTRPSIDE 214
GGWV EYGNLLTFA VRGAAHMVPY+QPSRAL LF++FV G +LP+ + P++ +
Sbjct: 426 GGWVVEYGNLLTFATVRGAAHMVPYSQPSRALHLFTSFVLGRKLPHKSPPALHD 479
>gb|AAO42304.1| putative serine carboxypeptidase II [Arabidopsis thaliana]
Length = 442
Score = 176 bits (445), Expect = 2e-43
Identities = 79/107 (73%), Positives = 94/107 (87%)
Frame = -2
Query: 558 INILPILKRIVKNHIPVWVFSGDQDSVVPLLGSRTLIRELAHELQYKVTVPYGAWFHQGQ 379
I++LP LKRI++N PVW+FSGDQDSV+PL SRTL+RELA +L +K T+PYGAWFH+ Q
Sbjct: 326 IDMLPSLKRIIQNQTPVWIFSGDQDSVIPLQSSRTLVRELAEDLNFKTTIPYGAWFHKEQ 385
Query: 378 VGGWVTEYGNLLTFAPVRGAAHMVPYAQPSRALGLFSAFVRGSRLPN 238
VGGWVTEYGNLLTFA VRGAAHMVPYA+PSRAL +FS+F+ G RLPN
Sbjct: 386 VGGWVTEYGNLLTFATVRGAAHMVPYAEPSRALHMFSSFMNGRRLPN 432
>ref|NP_178937.1| putative serine carboxypeptidase II; protein id: At2g12480.1
[Arabidopsis thaliana] gi|25289797|pir||D84503 probable
serine carboxypeptidase II [imported] - Arabidopsis
thaliana gi|4733981|gb|AAD28662.1| putative serine
carboxypeptidase II [Arabidopsis thaliana]
Length = 468
Score = 176 bits (445), Expect = 2e-43
Identities = 79/107 (73%), Positives = 94/107 (87%)
Frame = -2
Query: 558 INILPILKRIVKNHIPVWVFSGDQDSVVPLLGSRTLIRELAHELQYKVTVPYGAWFHQGQ 379
I++LP LKRI++N PVW+FSGDQDSV+PL SRTL+RELA +L +K T+PYGAWFH+ Q
Sbjct: 352 IDMLPSLKRIIQNQTPVWIFSGDQDSVIPLQSSRTLVRELAEDLNFKTTIPYGAWFHKEQ 411
Query: 378 VGGWVTEYGNLLTFAPVRGAAHMVPYAQPSRALGLFSAFVRGSRLPN 238
VGGWVTEYGNLLTFA VRGAAHMVPYA+PSRAL +FS+F+ G RLPN
Sbjct: 412 VGGWVTEYGNLLTFATVRGAAHMVPYAEPSRALHMFSSFMNGRRLPN 458
>ref|NP_199038.1| serine carboxypeptidase-II like; protein id: At5g42230.1
[Arabidopsis thaliana] gi|10177008|dbj|BAB10196.1|
serine carboxypeptidase-II like [Arabidopsis thaliana]
gi|27754631|gb|AAO22761.1| putative serine
carboxypeptidase-II [Arabidopsis thaliana]
gi|28393945|gb|AAO42380.1| putative serine
carboxypeptidase-II [Arabidopsis thaliana]
Length = 469
Score = 165 bits (418), Expect = 3e-40
Identities = 77/108 (71%), Positives = 89/108 (82%)
Frame = -2
Query: 555 NILPILKRIVKNHIPVWVFSGDQDSVVPLLGSRTLIRELAHELQYKVTVPYGAWFHQGQV 376
N+LP LKRI++N IPV +FSGDQDSVVP LG+RT++ ELA++L +K TVPYG WFH+ QV
Sbjct: 356 NMLPTLKRIIQNKIPVRIFSGDQDSVVPFLGTRTIVGELANDLNFKTTVPYGVWFHKRQV 415
Query: 375 GGWVTEYGNLLTFAPVRGAAHMVPYAQPSRALGLFSAFVRGSRLPNTT 232
GGW EYGNLLTFA VRGAAH V Y QPSRAL LFS F+RG RLPN T
Sbjct: 416 GGWAIEYGNLLTFATVRGAAHAVAYTQPSRALHLFSTFLRGQRLPNKT 463
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 523,374,237
Number of Sequences: 1393205
Number of extensions: 11572084
Number of successful extensions: 30864
Number of sequences better than 10.0: 188
Number of HSP's better than 10.0 without gapping: 29922
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30714
length of database: 448,689,247
effective HSP length: 116
effective length of database: 287,077,467
effective search space used: 20382500157
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
