Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC017948A_C01 KMC017948A_c01
(569 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAK16185.2|AC079887_17 putative ankyrin [Oryza sativa] 109 2e-23
dbj|BAC41927.1| putative ankyrin [Arabidopsis thaliana] gi|28950... 107 1e-22
ref|NP_178442.1| putative ankyrin; protein id: At2g03430.1 [Arab... 100 1e-20
gb|EAA14062.1| agCP8310 [Anopheles gambiae str. PEST] 47 4e-05
gb|EAA24842.1| UNC-44 ANKYRINS [Fusobacterium nucleatum subsp. v... 49 6e-05
>gb|AAK16185.2|AC079887_17 putative ankyrin [Oryza sativa]
Length = 252
Score = 109 bits (273), Expect = 2e-23
Identities = 54/71 (76%), Positives = 61/71 (85%)
Frame = -2
Query: 568 IEEGAEVDAVDRAGPTPLMSAVIDRNKEIALLLIRHGADVDVEDKEGYTVLGRATDEFRA 389
IEEGA+VDAVD+ G TPLM AVI +K +ALLL+RHGADV +EDKEGYTVLGRA+D FR
Sbjct: 181 IEEGADVDAVDKTGQTPLMHAVISEDKAVALLLVRHGADVAIEDKEGYTVLGRASDSFRP 240
Query: 388 ILIDAAKAMLE 356
LIDAAKAMLE
Sbjct: 241 ALIDAAKAMLE 251
Score = 38.1 bits (87), Expect = 0.078
Identities = 25/64 (39%), Positives = 32/64 (49%)
Frame = -2
Query: 568 IEEGAEVDAVDRAGPTPLMSAVIDRNKEIALLLIRHGADVDVEDKEGYTVLGRATDEFRA 389
+++GA VD AG T L A IA LI H A+V+ +DK G T L RA A
Sbjct: 115 LDQGANVDLTTDAGRTALHYAASKGRLNIAETLIAHSANVNKKDKFGCTPLHRAASTGNA 174
Query: 388 ILID 377
L +
Sbjct: 175 ELCE 178
>dbj|BAC41927.1| putative ankyrin [Arabidopsis thaliana] gi|28950799|gb|AAO63323.1|
At2g03430 [Arabidopsis thaliana]
Length = 240
Score = 107 bits (267), Expect = 1e-22
Identities = 54/71 (76%), Positives = 61/71 (85%)
Frame = -2
Query: 568 IEEGAEVDAVDRAGPTPLMSAVIDRNKEIALLLIRHGADVDVEDKEGYTVLGRATDEFRA 389
IEEGAE+DA D+ G T LM +VI +K++A LLIRHGADVDVEDKEGYTVLGRAT+EFR
Sbjct: 169 IEEGAEIDATDKMGQTALMHSVICDDKQVAFLLIRHGADVDVEDKEGYTVLGRATNEFRP 228
Query: 388 ILIDAAKAMLE 356
LIDAAKAMLE
Sbjct: 229 ALIDAAKAMLE 239
Score = 41.6 bits (96), Expect = 0.007
Identities = 23/54 (42%), Positives = 31/54 (56%)
Frame = -2
Query: 568 IEEGAEVDAVDRAGPTPLMSAVIDRNKEIALLLIRHGADVDVEDKEGYTVLGRA 407
+ GA+V+A + G T L A EIA LL+ HGA +++ DK G T L RA
Sbjct: 103 LTRGADVNAKNNGGRTALHYAASKGRLEIAQLLLTHGAKINITDKVGCTPLHRA 156
>ref|NP_178442.1| putative ankyrin; protein id: At2g03430.1 [Arabidopsis thaliana]
gi|25295712|pir||D84448 probable ankyrin [imported] -
Arabidopsis thaliana gi|4335756|gb|AAD17433.1| putative
ankyrin [Arabidopsis thaliana]
Length = 247
Score = 100 bits (249), Expect = 1e-20
Identities = 54/78 (69%), Positives = 61/78 (77%), Gaps = 7/78 (8%)
Frame = -2
Query: 568 IEEGAEVDAVDRAGPTPLMSAVIDRNKE-------IALLLIRHGADVDVEDKEGYTVLGR 410
IEEGAE+DA D+ G T LM +VI +K+ +A LLIRHGADVDVEDKEGYTVLGR
Sbjct: 169 IEEGAEIDATDKMGQTALMHSVICDDKQLKVSMDQVAFLLIRHGADVDVEDKEGYTVLGR 228
Query: 409 ATDEFRAILIDAAKAMLE 356
AT+EFR LIDAAKAMLE
Sbjct: 229 ATNEFRPALIDAAKAMLE 246
Score = 41.6 bits (96), Expect = 0.007
Identities = 23/54 (42%), Positives = 31/54 (56%)
Frame = -2
Query: 568 IEEGAEVDAVDRAGPTPLMSAVIDRNKEIALLLIRHGADVDVEDKEGYTVLGRA 407
+ GA+V+A + G T L A EIA LL+ HGA +++ DK G T L RA
Sbjct: 103 LTRGADVNAKNNGGRTALHYAASKGRLEIAQLLLTHGAKINITDKVGCTPLHRA 156
>gb|EAA14062.1| agCP8310 [Anopheles gambiae str. PEST]
Length = 792
Score = 47.0 bits (110), Expect(2) = 4e-05
Identities = 33/86 (38%), Positives = 45/86 (51%), Gaps = 4/86 (4%)
Frame = -2
Query: 568 IEEGAEVDAVDRAGPTPLMSAVIDRNKEIALLLIRHGADVDVEDKEGYTVLGRAT----D 401
+ GA V+A R TPL A N EI +LL++HGA +D K+ YT L A D
Sbjct: 427 LRNGAYVNAQAREDQTPLHVASRIGNMEIVMLLLQHGAKIDAVTKDNYTPLHIAAKEGQD 486
Query: 400 EFRAILIDAAKAMLE*YNKKKLENCH 323
E A+L+D ++A +E KK H
Sbjct: 487 EVAALLLD-SEANVEAVTKKGFTPLH 511
Score = 38.1 bits (87), Expect = 0.078
Identities = 22/51 (43%), Positives = 29/51 (56%)
Frame = -2
Query: 568 IEEGAEVDAVDRAGPTPLMSAVIDRNKEIALLLIRHGADVDVEDKEGYTVL 416
++ A V+AV + G TPL A N + A LL+ GA VDV+ K G T L
Sbjct: 493 LDSEANVEAVTKKGFTPLHLAAKYGNLKCAELLLERGAQVDVQGKNGVTPL 543
Score = 38.1 bits (87), Expect = 0.078
Identities = 21/57 (36%), Positives = 32/57 (55%)
Frame = -2
Query: 568 IEEGAEVDAVDRAGPTPLMSAVIDRNKEIALLLIRHGADVDVEDKEGYTVLGRATDE 398
++ GA VD + G T L A + KEI LL+++ A V+V+ + G+T L A E
Sbjct: 58 LKRGALVDNATKKGNTALHIASLAGQKEIIQLLLQYNASVNVQSQNGFTPLYMAAQE 114
Score = 35.0 bits (79), Expect = 0.66
Identities = 20/51 (39%), Positives = 29/51 (56%)
Frame = -2
Query: 568 IEEGAEVDAVDRAGPTPLMSAVIDRNKEIALLLIRHGADVDVEDKEGYTVL 416
+E GA+VD + G TPL A ++++ALLL+ GA K G+T L
Sbjct: 526 LERGAQVDVQGKNGVTPLHVASHYDHQKVALLLLEKGASPYSPAKNGHTPL 576
Score = 32.3 bits (72), Expect = 4.3
Identities = 22/71 (30%), Positives = 34/71 (46%)
Frame = -2
Query: 568 IEEGAEVDAVDRAGPTPLMSAVIDRNKEIALLLIRHGADVDVEDKEGYTVLGRATDEFRA 389
+E+GA + + G TPL A IA L+ + AD + E K G+T L + E
Sbjct: 559 LEKGASPYSPAKNGHTPLHIASKKNQLNIATTLLDYKADANAESKTGFTPLHLSAQEGHG 618
Query: 388 ILIDAAKAMLE 356
D A+ +L+
Sbjct: 619 ---DMARVLLD 626
Score = 31.6 bits (70), Expect = 7.3
Identities = 16/54 (29%), Positives = 27/54 (49%)
Frame = -2
Query: 568 IEEGAEVDAVDRAGPTPLMSAVIDRNKEIALLLIRHGADVDVEDKEGYTVLGRA 407
I +D++ R G TPL A + ++ +L+ HGA++ + K G L A
Sbjct: 229 IANHGRIDSITRDGLTPLHCAARSGHDQVIEVLLEHGAEIISKTKNGLAPLHMA 282
Score = 31.2 bits (69), Expect = 9.5
Identities = 17/64 (26%), Positives = 33/64 (51%)
Frame = -2
Query: 568 IEEGAEVDAVDRAGPTPLMSAVIDRNKEIALLLIRHGADVDVEDKEGYTVLGRATDEFRA 389
+E A +D V + G TPL A + LI + A+++++ G+T L +A +
Sbjct: 658 LEHKARIDPVTKTGFTPLHVAAHFGQAGMVKYLIENDANIEMKTNIGHTPLHQAAQQGHT 717
Query: 388 ILID 377
++I+
Sbjct: 718 LIIN 721
Score = 21.6 bits (44), Expect(2) = 4e-05
Identities = 9/21 (42%), Positives = 12/21 (56%)
Frame = -3
Query: 318 AKRAQYSKLRLLLLKKSGPPY 256
A + K+ LLLL+K PY
Sbjct: 546 ASHYDHQKVALLLLEKGASPY 566
>gb|EAA24842.1| UNC-44 ANKYRINS [Fusobacterium nucleatum subsp. vincentii ATCC
49256]
Length = 281
Score = 48.5 bits (114), Expect = 6e-05
Identities = 20/55 (36%), Positives = 35/55 (63%)
Frame = -2
Query: 568 IEEGAEVDAVDRAGPTPLMSAVIDRNKEIALLLIRHGADVDVEDKEGYTVLGRAT 404
+ EGA+++A D+ G TPL+ +++ E A LL+ GAD ++D +G+ + AT
Sbjct: 45 LNEGADINATDKEGRTPLIYTLMENRTEAAKLLLEKGADTQIKDNDGHKAIDYAT 99
Score = 40.0 bits (92), Expect = 0.021
Identities = 26/71 (36%), Positives = 35/71 (48%)
Frame = -2
Query: 568 IEEGAEVDAVDRAGPTPLMSAVIDRNKEIALLLIRHGADVDVEDKEGYTVLGRATDEFRA 389
+ GA+ + PL + NKEI LL+ GAD++ DKEG T L E R
Sbjct: 12 LSNGADCSLANNNSMLPLHAVSKSGNKEIISLLLNEGADINATDKEGRTPLIYTLMENRT 71
Query: 388 ILIDAAKAMLE 356
+AAK +LE
Sbjct: 72 ---EAAKLLLE 79
Score = 33.5 bits (75), Expect = 1.9
Identities = 23/70 (32%), Positives = 35/70 (49%)
Frame = -2
Query: 565 EEGAEVDAVDRAGPTPLMSAVIDRNKEIALLLIRHGADVDVEDKEGYTVLGRATDEFRAI 386
++G E++ ++ G TPL+ A I N I LL++ GAD G T L A +
Sbjct: 145 QDGIELNTLNDNGNTPLIIASIQSNLLIVQLLLKAGADAKQRLLNGNTALHFAAENGNQY 204
Query: 385 LIDAAKAMLE 356
+ KA+LE
Sbjct: 205 I---GKALLE 211
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 461,806,829
Number of Sequences: 1393205
Number of extensions: 9549678
Number of successful extensions: 24799
Number of sequences better than 10.0: 1004
Number of HSP's better than 10.0 without gapping: 21481
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24705
length of database: 448,689,247
effective HSP length: 116
effective length of database: 287,077,467
effective search space used: 20956655091
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
