Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC017915A_C01 KMC017915A_c01
(520 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAB03143.1| ankyrin-like protein [Arabidopsis thaliana] 106 2e-22
gb|AAM62711.1| ankyrin-like protein [Arabidopsis thaliana] 106 2e-22
ref|NP_187842.1| ankyrin-like protein; protein id: At3g12360.1 [... 106 2e-22
gb|AAN64471.1| hypothetical protein, 5'-partial [Oryza sativa (j... 90 1e-17
ref|NP_187566.1| putative ankyrin; protein id: At3g09550.1 [Arab... 80 1e-14
>dbj|BAB03143.1| ankyrin-like protein [Arabidopsis thaliana]
Length = 1100
Score = 106 bits (264), Expect = 2e-22
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 1/81 (1%)
Frame = -3
Query: 518 IPASYIVV-RSEE*VGLPILVTVVGGVIISGVIGTMTYYVVRSKRSRSMRKKEKQQARRS 342
+ +SYIVV R E LVTVVGGVI++GV+GTMTYYVV+SKR+RSMRKK K ARRS
Sbjct: 1023 LASSYIVVGRKNEWAAE--LVTVVGGVIMAGVLGTMTYYVVKSKRTRSMRKKVK-SARRS 1079
Query: 341 GSNSWHHSEFSNSEVDPIYAL 279
GSNSWHHS+FSNSEVDPI+A+
Sbjct: 1080 GSNSWHHSDFSNSEVDPIFAI 1100
>gb|AAM62711.1| ankyrin-like protein [Arabidopsis thaliana]
Length = 534
Score = 106 bits (264), Expect = 2e-22
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 1/81 (1%)
Frame = -3
Query: 518 IPASYIVV-RSEE*VGLPILVTVVGGVIISGVIGTMTYYVVRSKRSRSMRKKEKQQARRS 342
+ +SYIVV R E LVTVVGGVI++GV+GTMTYYVV+SKR+RSMRKK K ARRS
Sbjct: 457 LASSYIVVGRKNEWAAE--LVTVVGGVIMAGVLGTMTYYVVKSKRTRSMRKKVK-SARRS 513
Query: 341 GSNSWHHSEFSNSEVDPIYAL 279
GSNSWHHS+FSNSEVDPI+A+
Sbjct: 514 GSNSWHHSDFSNSEVDPIFAI 534
>ref|NP_187842.1| ankyrin-like protein; protein id: At3g12360.1 [Arabidopsis
thaliana] gi|12321945|gb|AAG51002.1|AC069474_1
ankyrin-like protein; 93648-91299 [Arabidopsis thaliana]
Length = 590
Score = 106 bits (264), Expect = 2e-22
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 1/81 (1%)
Frame = -3
Query: 518 IPASYIVV-RSEE*VGLPILVTVVGGVIISGVIGTMTYYVVRSKRSRSMRKKEKQQARRS 342
+ +SYIVV R E LVTVVGGVI++GV+GTMTYYVV+SKR+RSMRKK K ARRS
Sbjct: 513 LASSYIVVGRKNEWAAE--LVTVVGGVIMAGVLGTMTYYVVKSKRTRSMRKKVK-SARRS 569
Query: 341 GSNSWHHSEFSNSEVDPIYAL 279
GSNSWHHS+FSNSEVDPI+A+
Sbjct: 570 GSNSWHHSDFSNSEVDPIFAI 590
>gb|AAN64471.1| hypothetical protein, 5'-partial [Oryza sativa (japonica
cultivar-group)]
Length = 284
Score = 90.1 bits (222), Expect = 1e-17
Identities = 50/81 (61%), Positives = 65/81 (79%), Gaps = 1/81 (1%)
Frame = -3
Query: 518 IPASYIVVRSEE*VGLPILVTVVGGVIISGVIGTMTYYVVRSKRSRSMRKKEKQQARRSG 339
I ++YIVV + +LVT++GGVI++GV+GTMTYYVVRSKR+RS+RKK K RRSG
Sbjct: 206 ISSAYIVV-GKHFQWAALLVTLIGGVIMAGVLGTMTYYVVRSKRTRSIRKKVK-STRRSG 263
Query: 338 SNSW-HHSEFSNSEVDPIYAL 279
SNSW +SEFS+SE+D IYA+
Sbjct: 264 SNSWQQNSEFSDSEIDRIYAI 284
>ref|NP_187566.1| putative ankyrin; protein id: At3g09550.1 [Arabidopsis thaliana]
gi|6682234|gb|AAF23286.1|AC016661_11 putative ankyrin
[Arabidopsis thaliana]
Length = 436
Score = 80.1 bits (196), Expect = 1e-14
Identities = 41/82 (50%), Positives = 61/82 (74%), Gaps = 2/82 (2%)
Frame = -3
Query: 518 IPASYIVVRSEE*VGLPILVTVVGGVIISGVIGTMTYYVVRSKRSRSMRKKEKQQARRSG 339
I +SYIVV ++VTV+G V ++G++ MTYYVV+SKR+R +RKKEK+++ R+G
Sbjct: 356 ISSSYIVVGRRNRYAA-VVVTVIGTVTMTGILSIMTYYVVKSKRTRIVRKKEKKKSARNG 414
Query: 338 SNSWHHSEFS--NSEVDPIYAL 279
++SWHH+ S SEV+PIYA+
Sbjct: 415 TSSWHHANPSETESEVNPIYAI 436
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 438,198,335
Number of Sequences: 1393205
Number of extensions: 8585546
Number of successful extensions: 19628
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 18999
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19603
length of database: 448,689,247
effective HSP length: 115
effective length of database: 288,470,672
effective search space used: 16442828304
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
