Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC017909A_C01 KMC017909A_c01
(1053 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_178112.1| putative DnaJ protein; protein id: At1g79940.1 ... 387 e-106
pir||F96830 hypothetical protein F18B13.2 [imported] - Arabidops... 387 e-106
gb|AAK92727.2| unknown protein [Arabidopsis thaliana] 305 1e-81
pir||T04949 hypothetical protein F7J7.120 - Arabidopsis thaliana... 305 1e-81
ref|NP_567621.1| putative protein; protein id: At4g21180.1 [Arab... 305 1e-81
>ref|NP_178112.1| putative DnaJ protein; protein id: At1g79940.1 [Arabidopsis thaliana]
gi|12324575|gb|AAG52236.1|AC011717_4 putative DnaJ
protein; 34157-30943 [Arabidopsis thaliana]
Length = 702
Score = 387 bits (995), Expect = e-106
Identities = 187/280 (66%), Positives = 234/280 (82%), Gaps = 3/280 (1%)
Frame = +1
Query: 1 KVRTFQELHDMYPQERAELLIQTGGLSSAEVQDIEVVLDMMPSITLDVTCETEGEEGMQE 180
KV++FQ+L +M ++R+ELL Q GLS+ +V+DIE VL+MMPSIT+D+TCETEGEEG+QE
Sbjct: 424 KVKSFQDLQEMRLEDRSELLTQVAGLSATDVEDIEKVLEMMPSITVDITCETEGEEGIQE 483
Query: 181 GDIVTLHAWINVKRGNGLIGALPHAPYYPFHKEENFWFLLADSVSNNVWFFQKVSFLDEA 360
GDIVTL AW+ +KR NGL+GALPHAPY+PFHKEEN+W LLADSVSNNVWF QKVSFLDE
Sbjct: 484 GDIVTLQAWVTLKRPNGLVGALPHAPYFPFHKEENYWVLLADSVSNNVWFSQKVSFLDEG 543
Query: 361 AAITAASKAIEESKEGSGATVKETSKAVAEAVEKVKAGSRLVMGKFQAPSEGNYNLTCYL 540
AITAASKAI ES EGSGA VKET+ AV EA+EKVK GSRLVMGK QAP+EG YNLTC+
Sbjct: 544 GAITAASKAISESMEGSGAGVKETNDAVREAIEKVKGGSRLVMGKLQAPAEGTYNLTCFC 603
Query: 541 LCDSWLGCDRRTNVKLKIVKRTRAGTRGAVLADEGPIMEDGVEEDEDNEDEEYDDDYESE 720
LCD+W+GCD++ +K+K++KRTRAGTRG V +DEG I E+G+EE+++ E+E+YDDDYESE
Sbjct: 604 LCDTWIGCDKKQALKVKVLKRTRAGTRGLV-SDEGAIAEEGMEEEDEIEEEDYDDDYESE 662
Query: 721 YSEDEED--DQNSKNKHQATNGTAK-KHGQAAESSGSDEE 831
YSEDE++ D + K + NG+ K K ++E SGS+EE
Sbjct: 663 YSEDEDEKKDMDEKRGSKKANGSVKQKKESSSEESGSEEE 702
>pir||F96830 hypothetical protein F18B13.2 [imported] - Arabidopsis thaliana
gi|5902360|gb|AAD55462.1|AC009322_2 Hypothetical protein
[Arabidopsis thaliana]
Length = 719
Score = 387 bits (995), Expect = e-106
Identities = 187/280 (66%), Positives = 234/280 (82%), Gaps = 3/280 (1%)
Frame = +1
Query: 1 KVRTFQELHDMYPQERAELLIQTGGLSSAEVQDIEVVLDMMPSITLDVTCETEGEEGMQE 180
KV++FQ+L +M ++R+ELL Q GLS+ +V+DIE VL+MMPSIT+D+TCETEGEEG+QE
Sbjct: 441 KVKSFQDLQEMRLEDRSELLTQVAGLSATDVEDIEKVLEMMPSITVDITCETEGEEGIQE 500
Query: 181 GDIVTLHAWINVKRGNGLIGALPHAPYYPFHKEENFWFLLADSVSNNVWFFQKVSFLDEA 360
GDIVTL AW+ +KR NGL+GALPHAPY+PFHKEEN+W LLADSVSNNVWF QKVSFLDE
Sbjct: 501 GDIVTLQAWVTLKRPNGLVGALPHAPYFPFHKEENYWVLLADSVSNNVWFSQKVSFLDEG 560
Query: 361 AAITAASKAIEESKEGSGATVKETSKAVAEAVEKVKAGSRLVMGKFQAPSEGNYNLTCYL 540
AITAASKAI ES EGSGA VKET+ AV EA+EKVK GSRLVMGK QAP+EG YNLTC+
Sbjct: 561 GAITAASKAISESMEGSGAGVKETNDAVREAIEKVKGGSRLVMGKLQAPAEGTYNLTCFC 620
Query: 541 LCDSWLGCDRRTNVKLKIVKRTRAGTRGAVLADEGPIMEDGVEEDEDNEDEEYDDDYESE 720
LCD+W+GCD++ +K+K++KRTRAGTRG V +DEG I E+G+EE+++ E+E+YDDDYESE
Sbjct: 621 LCDTWIGCDKKQALKVKVLKRTRAGTRGLV-SDEGAIAEEGMEEEDEIEEEDYDDDYESE 679
Query: 721 YSEDEED--DQNSKNKHQATNGTAK-KHGQAAESSGSDEE 831
YSEDE++ D + K + NG+ K K ++E SGS+EE
Sbjct: 680 YSEDEDEKKDMDEKRGSKKANGSVKQKKESSSEESGSEEE 719
>gb|AAK92727.2| unknown protein [Arabidopsis thaliana]
Length = 297
Score = 305 bits (780), Expect = 1e-81
Identities = 155/277 (55%), Positives = 204/277 (72%)
Frame = +1
Query: 1 KVRTFQELHDMYPQERAELLIQTGGLSSAEVQDIEVVLDMMPSITLDVTCETEGEEGMQE 180
+V++FQ+ ++ ER++LL + LS +VQDIE VL+M+PS+ ++VTC+TEGEEG+QE
Sbjct: 41 QVKSFQKFQELSLAERSKLLREVVSLSETDVQDIEKVLEMIPSLKINVTCKTEGEEGIQE 100
Query: 181 GDIVTLHAWINVKRGNGLIGALPHAPYYPFHKEENFWFLLADSVSNNVWFFQKVSFLDEA 360
GDI+T+ AWI +KR NGLIGA+PH+PY+PFHKEENFW LLAD SN+VWFFQKV F+DEA
Sbjct: 101 GDIMTVQAWITLKRPNGLIGAIPHSPYFPFHKEENFWVLLAD--SNHVWFFQKVKFMDEA 158
Query: 361 AAITAASKAIEESKEGSGATVKETSKAVAEAVEKVKAGSRLVMGKFQAPSEGNYNLTCYL 540
AI AAS I E+ E GA+VKET+ AV EAVEKVK+GSRLVMG+ AP EG YNLTC+
Sbjct: 159 GAIAAASNTITETMEPLGASVKETNDAVKEAVEKVKSGSRLVMGRLLAPGEGTYNLTCFC 218
Query: 541 LCDSWLGCDRRTNVKLKIVKRTRAGTRGAVLADEGPIMEDGVEEDEDNEDEEYDDDYESE 720
L D+W+GCD++T++K++++KRTR EG E+G+EE++D +EE DYESE
Sbjct: 219 LSDTWIGCDQKTSLKVEVLKRTR--------DVEGENAEEGLEEEDDEIEEE---DYESE 267
Query: 721 YSEDEEDDQNSKNKHQATNGTAKKHGQAAESSGSDEE 831
YSEDEED + K ++E SGSDEE
Sbjct: 268 YSEDEEDKKRGSKK-------KVNKESSSEESGSDEE 297
>pir||T04949 hypothetical protein F7J7.120 - Arabidopsis thaliana
gi|2911075|emb|CAA17537.1| putative protein [Arabidopsis
thaliana] gi|7268915|emb|CAB79118.1| putative protein
[Arabidopsis thaliana]
Length = 648
Score = 305 bits (780), Expect = 1e-81
Identities = 155/277 (55%), Positives = 204/277 (72%)
Frame = +1
Query: 1 KVRTFQELHDMYPQERAELLIQTGGLSSAEVQDIEVVLDMMPSITLDVTCETEGEEGMQE 180
+V++FQ+ ++ ER++LL + LS +VQDIE VL+M+PS+ ++VTC+TEGEEG+QE
Sbjct: 392 QVKSFQKFQELSLAERSKLLREVVSLSETDVQDIEKVLEMIPSLKINVTCKTEGEEGIQE 451
Query: 181 GDIVTLHAWINVKRGNGLIGALPHAPYYPFHKEENFWFLLADSVSNNVWFFQKVSFLDEA 360
GDI+T+ AWI +KR NGLIGA+PH+PY+PFHKEENFW LLAD SN+VWFFQKV F+DEA
Sbjct: 452 GDIMTVQAWITLKRPNGLIGAIPHSPYFPFHKEENFWVLLAD--SNHVWFFQKVKFMDEA 509
Query: 361 AAITAASKAIEESKEGSGATVKETSKAVAEAVEKVKAGSRLVMGKFQAPSEGNYNLTCYL 540
AI AAS I E+ E GA+VKET+ AV EAVEKVK+GSRLVMG+ AP EG YNLTC+
Sbjct: 510 GAIAAASNTITETMEPLGASVKETNDAVKEAVEKVKSGSRLVMGRLLAPGEGTYNLTCFC 569
Query: 541 LCDSWLGCDRRTNVKLKIVKRTRAGTRGAVLADEGPIMEDGVEEDEDNEDEEYDDDYESE 720
L D+W+GCD++T++K++++KRTR EG E+G+EE++D +EE DYESE
Sbjct: 570 LSDTWIGCDQKTSLKVEVLKRTR--------DVEGENAEEGLEEEDDEIEEE---DYESE 618
Query: 721 YSEDEEDDQNSKNKHQATNGTAKKHGQAAESSGSDEE 831
YSEDEED + K ++E SGSDEE
Sbjct: 619 YSEDEEDKKRGSKK-------KVNKESSSEESGSDEE 648
>ref|NP_567621.1| putative protein; protein id: At4g21180.1 [Arabidopsis thaliana]
Length = 661
Score = 305 bits (780), Expect = 1e-81
Identities = 155/277 (55%), Positives = 204/277 (72%)
Frame = +1
Query: 1 KVRTFQELHDMYPQERAELLIQTGGLSSAEVQDIEVVLDMMPSITLDVTCETEGEEGMQE 180
+V++FQ+ ++ ER++LL + LS +VQDIE VL+M+PS+ ++VTC+TEGEEG+QE
Sbjct: 405 QVKSFQKFQELSLAERSKLLREVVSLSETDVQDIEKVLEMIPSLKINVTCKTEGEEGIQE 464
Query: 181 GDIVTLHAWINVKRGNGLIGALPHAPYYPFHKEENFWFLLADSVSNNVWFFQKVSFLDEA 360
GDI+T+ AWI +KR NGLIGA+PH+PY+PFHKEENFW LLAD SN+VWFFQKV F+DEA
Sbjct: 465 GDIMTVQAWITLKRPNGLIGAIPHSPYFPFHKEENFWVLLAD--SNHVWFFQKVKFMDEA 522
Query: 361 AAITAASKAIEESKEGSGATVKETSKAVAEAVEKVKAGSRLVMGKFQAPSEGNYNLTCYL 540
AI AAS I E+ E GA+VKET+ AV EAVEKVK+GSRLVMG+ AP EG YNLTC+
Sbjct: 523 GAIAAASNTITETMEPLGASVKETNDAVKEAVEKVKSGSRLVMGRLLAPGEGTYNLTCFC 582
Query: 541 LCDSWLGCDRRTNVKLKIVKRTRAGTRGAVLADEGPIMEDGVEEDEDNEDEEYDDDYESE 720
L D+W+GCD++T++K++++KRTR EG E+G+EE++D +EE DYESE
Sbjct: 583 LSDTWIGCDQKTSLKVEVLKRTR--------DVEGENAEEGLEEEDDEIEEE---DYESE 631
Query: 721 YSEDEEDDQNSKNKHQATNGTAKKHGQAAESSGSDEE 831
YSEDEED + K ++E SGSDEE
Sbjct: 632 YSEDEEDKKRGSKK-------KVNKESSSEESGSDEE 661
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 916,366,727
Number of Sequences: 1393205
Number of extensions: 21468702
Number of successful extensions: 244155
Number of sequences better than 10.0: 2507
Number of HSP's better than 10.0 without gapping: 101974
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 173933
length of database: 448,689,247
effective HSP length: 124
effective length of database: 275,931,827
effective search space used: 62360592902
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
