Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC017905A_C01 KMC017905A_c01
(579 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAL35299.1|AF342983_1 bZip transcription factor Fcr3p [Candid... 32 4.4
>gb|AAL35299.1|AF342983_1 bZip transcription factor Fcr3p [Candida albicans]
Length = 399
Score = 32.3 bits (72), Expect = 4.4
Identities = 26/89 (29%), Positives = 38/89 (42%), Gaps = 9/89 (10%)
Frame = -2
Query: 344 DSFNLPRTQKCIFEYTITDHNRSQ*AKIMKFSYSSQE*HLLNVL*GQDIQNVWTYLDIRS 165
D FN P+TQK E+ + N + Y+ + H L L VW YL I++
Sbjct: 299 DKFNFPKTQKDFIEHVLQGTNHQLKDENKDKVYNDNQGHKLLAL-----GAVWDYLQIKA 353
Query: 164 -----TFDCI*RRIILIQ----EKCHDYG 105
F+ I ++ + EKCH YG
Sbjct: 354 EEADLDFNSIDFNDVMEKLKGNEKCHGYG 382
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 447,340,516
Number of Sequences: 1393205
Number of extensions: 8421670
Number of successful extensions: 15408
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 15141
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15408
length of database: 448,689,247
effective HSP length: 117
effective length of database: 285,684,262
effective search space used: 21426319650
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
