Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC017867A_C01 KMC017867A_c01
(534 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAB53347.1| alpha-1,3-mannosyl-glycoprotein beta-1,2-N-acety... 99 3e-20
emb|CAC80702.1| N-acetylglucosaminyltransferase I [Nicotiana tab... 99 4e-20
emb|CAC80699.1| N-acetylglucosaminyltransferase I [Solanum tuber... 98 5e-20
emb|CAC80697.1| N-acetylglucosaminyltransferase I [Solanum tuber... 98 7e-20
emb|CAC80698.1| N-acetylglucosaminyltransferase I [Solanum tuber... 98 7e-20
>emb|CAB53347.1| alpha-1,3-mannosyl-glycoprotein
beta-1,2-N-acetylglucosaminyltransferase [Nicotiana
tabacum]
Length = 446
Score = 99.0 bits (245), Expect = 3e-20
Identities = 44/62 (70%), Positives = 55/62 (87%)
Frame = -3
Query: 532 RIKYKDQSDFESIASQFGIFQEWKDGVPRTAYKGVVVFRYQSTKRIFLVGPESLKLLQIE 353
RI+Y+DQ DFE IA QFGIF+EWKDGVPR AYKG+VVFRYQ+++R+FLVGP+SL+ L E
Sbjct: 385 RIQYRDQLDFEDIARQFGIFEEWKDGVPRAAYKGIVVFRYQTSRRVFLVGPDSLQQLGNE 444
Query: 352 DS 347
D+
Sbjct: 445 DT 446
>emb|CAC80702.1| N-acetylglucosaminyltransferase I [Nicotiana tabacum]
Length = 446
Score = 98.6 bits (244), Expect = 4e-20
Identities = 44/62 (70%), Positives = 56/62 (89%)
Frame = -3
Query: 532 RIKYKDQSDFESIASQFGIFQEWKDGVPRTAYKGVVVFRYQSTKRIFLVGPESLKLLQIE 353
RI+Y+DQ DFE+IA QFGIF+EWKDGVPR AYKG+VVFRYQ+++R+FLVG +SL+ L IE
Sbjct: 385 RIQYRDQLDFENIARQFGIFEEWKDGVPRAAYKGIVVFRYQTSRRVFLVGHDSLQQLGIE 444
Query: 352 DS 347
D+
Sbjct: 445 DT 446
>emb|CAC80699.1| N-acetylglucosaminyltransferase I [Solanum tuberosum]
Length = 373
Score = 98.2 bits (243), Expect = 5e-20
Identities = 42/62 (67%), Positives = 56/62 (89%)
Frame = -3
Query: 532 RIKYKDQSDFESIASQFGIFQEWKDGVPRTAYKGVVVFRYQSTKRIFLVGPESLKLLQIE 353
RI+Y+DQ DFE+IA QFGIF+EWKDGVPR AYKG+VVFR+Q+++R+FLV P+SL+ L +E
Sbjct: 312 RIQYRDQLDFEAIARQFGIFEEWKDGVPRAAYKGIVVFRFQTSRRVFLVAPDSLRQLGVE 371
Query: 352 DS 347
D+
Sbjct: 372 DT 373
>emb|CAC80697.1| N-acetylglucosaminyltransferase I [Solanum tuberosum]
Length = 446
Score = 97.8 bits (242), Expect = 7e-20
Identities = 42/62 (67%), Positives = 55/62 (87%)
Frame = -3
Query: 532 RIKYKDQSDFESIASQFGIFQEWKDGVPRTAYKGVVVFRYQSTKRIFLVGPESLKLLQIE 353
RI+Y+DQ DFE IA QFGIF+EWKDGVPR AYKG+VVFR+Q+++R+FLV P+SL+ L +E
Sbjct: 385 RIQYRDQLDFEDIARQFGIFEEWKDGVPRAAYKGIVVFRFQTSRRVFLVSPDSLRQLGVE 444
Query: 352 DS 347
D+
Sbjct: 445 DT 446
>emb|CAC80698.1| N-acetylglucosaminyltransferase I [Solanum tuberosum]
Length = 431
Score = 97.8 bits (242), Expect = 7e-20
Identities = 42/62 (67%), Positives = 55/62 (87%)
Frame = -3
Query: 532 RIKYKDQSDFESIASQFGIFQEWKDGVPRTAYKGVVVFRYQSTKRIFLVGPESLKLLQIE 353
RI+Y+DQ DFE IA QFGIF+EWKDGVPR AYKG+VVFR+Q+++R+FLV P+SL+ L +E
Sbjct: 370 RIQYRDQLDFEDIARQFGIFEEWKDGVPRAAYKGIVVFRFQTSRRVFLVAPDSLRQLGVE 429
Query: 352 DS 347
D+
Sbjct: 430 DT 431
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 411,455,529
Number of Sequences: 1393205
Number of extensions: 8087737
Number of successful extensions: 15792
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 15510
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15791
length of database: 448,689,247
effective HSP length: 115
effective length of database: 288,470,672
effective search space used: 17885181664
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
