Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC017846A_C01 KMC017846A_c01
(596 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|O20252|S17P_SPIOL Sedoheptulose-1,7-bisphosphatase, chloropla... 275 2e-73
ref|NP_191139.1| sedoheptulose-bisphosphatase precursor; protein... 274 7e-73
gb|AAK96860.1| sedoheptulose-bisphosphatase precursor [Arabidops... 274 7e-73
gb|AAO22558.1| sedoheptulose-1,7-bisphosphatase precursor [Oryza... 236 2e-61
sp|P46285|S17P_WHEAT Sedoheptulose-1,7-bisphosphatase, chloropla... 228 3e-59
>sp|O20252|S17P_SPIOL Sedoheptulose-1,7-bisphosphatase, chloroplast precursor
(Sedoheptulose-bisphosphatase) (SBPASE) (SED(1,7)P2ASE)
gi|7484686|pir||T09086 sedoheptulose-bisphosphatase (EC
3.1.3.37) precursor, chloroplast - spinach
gi|2529376|gb|AAB81104.1|
sedoheptulose-1,7-bisphosphatase [Spinacia oleracea]
Length = 387
Score = 275 bits (704), Expect = 2e-73
Identities = 137/184 (74%), Positives = 157/184 (84%)
Frame = +1
Query: 43 METGIACYTRGAFLPSVSSKHSPPSISPSFGFRSLKSSSLFGESLRVSSKSTLKVSKTKG 222
MET +AC +R LP VS +HS + S +SLKSSSLFGESLR+++KS+++V+K K
Sbjct: 1 METSMACCSRSIVLPRVSPQHSSALVPSSINLKSLKSSSLFGESLRMTTKSSVRVNKAKN 60
Query: 223 STSLVTKCEIGDSLEEFLTKATPDKGLIRLLFSMGEALRTISFKVKTASCGGTQCVNSFG 402
S SLVTKCE+GDSLEEFL KAT DKGLIRL+ MGEALRTI FKV+TASCGGTQCVN+FG
Sbjct: 61 S-SLVTKCELGDSLEEFLAKATTDKGLIRLMMCMGEALRTIGFKVRTASCGGTQCVNTFG 119
Query: 403 DEQLAVDMLADKLLFEALTYSHFCKYACSEEHPELLDMGGPTEGGFSVAFDPLDGSSIVD 582
DEQLA+D+LADKLLFEAL YSHFCKYACSEE PEL DMGGP +GGFSVAFDPLDGSSIVD
Sbjct: 120 DEQLAIDVLADKLLFEALNYSHFCKYACSEELPELQDMGGPVDGGFSVAFDPLDGSSIVD 179
Query: 583 TNFT 594
TNF+
Sbjct: 180 TNFS 183
>ref|NP_191139.1| sedoheptulose-bisphosphatase precursor; protein id: At3g55800.1,
supported by cDNA: gi_15451177 [Arabidopsis thaliana]
gi|1173345|sp|P46283|S17P_ARATH
Sedoheptulose-1,7-bisphosphatase, chloroplast precursor
(Sedoheptulose-bisphosphatase) (SBPASE) (SED(1,7)P2ASE)
gi|1076403|pir||S51838 sedoheptulose-bisphosphatase (EC
3.1.3.37) precursor - Arabidopsis thaliana
gi|786466|gb|AAB33001.1|
sedoheptulose-1,7-bisphosphatase; SBPase [Arabidopsis
thaliana] gi|7263568|emb|CAB81605.1|
sedoheptulose-bisphosphatase precursor [Arabidopsis
thaliana]
Length = 393
Score = 274 bits (700), Expect = 7e-73
Identities = 143/190 (75%), Positives = 155/190 (81%), Gaps = 6/190 (3%)
Frame = +1
Query: 43 METGIACYTRGAFLPSVSSKHS-----PPSISPSFGFRSLKSSSLFGESLRVSSKSTLKV 207
MET IACY+RG PSVSS+ S PPS S S F+ LKSSS+FG+SLR++ KS LK
Sbjct: 1 METSIACYSRGILPPSVSSQRSSTLVSPPSYSTSSSFKRLKSSSIFGDSLRLAPKSQLKA 60
Query: 208 SKTKGS-TSLVTKCEIGDSLEEFLTKATPDKGLIRLLFSMGEALRTISFKVKTASCGGTQ 384
+K K + S VTKCEIG SLEEFL +ATPDKGL LL MGEALRTI+FKV+TASCGGT
Sbjct: 61 TKAKSNGASTVTKCEIGQSLEEFLAQATPDKGLRTLLMCMGEALRTIAFKVRTASCGGTA 120
Query: 385 CVNSFGDEQLAVDMLADKLLFEALTYSHFCKYACSEEHPELLDMGGPTEGGFSVAFDPLD 564
CVNSFGDEQLAVDMLADKLLFEAL YSH CKYACSEE PEL DMGGP EGGFSVAFDPLD
Sbjct: 121 CVNSFGDEQLAVDMLADKLLFEALQYSHVCKYACSEEVPELQDMGGPVEGGFSVAFDPLD 180
Query: 565 GSSIVDTNFT 594
GSSIVDTNFT
Sbjct: 181 GSSIVDTNFT 190
>gb|AAK96860.1| sedoheptulose-bisphosphatase precursor [Arabidopsis thaliana]
gi|22136118|gb|AAM91137.1| sedoheptulose-bisphosphatase
precursor [Arabidopsis thaliana]
Length = 393
Score = 274 bits (700), Expect = 7e-73
Identities = 143/190 (75%), Positives = 155/190 (81%), Gaps = 6/190 (3%)
Frame = +1
Query: 43 METGIACYTRGAFLPSVSSKHS-----PPSISPSFGFRSLKSSSLFGESLRVSSKSTLKV 207
MET IACY+RG PSVSS+ S PPS S S F+ LKSSS+FG+SLR++ KS LK
Sbjct: 1 METSIACYSRGILPPSVSSQRSSTLVSPPSYSTSSSFKRLKSSSIFGDSLRLAPKSQLKA 60
Query: 208 SKTKGS-TSLVTKCEIGDSLEEFLTKATPDKGLIRLLFSMGEALRTISFKVKTASCGGTQ 384
+K K + S VTKCEIG SLEEFL +ATPDKGL LL MGEALRTI+FKV+TASCGGT
Sbjct: 61 TKAKSNGASTVTKCEIGQSLEEFLAQATPDKGLRTLLMCMGEALRTIAFKVRTASCGGTA 120
Query: 385 CVNSFGDEQLAVDMLADKLLFEALTYSHFCKYACSEEHPELLDMGGPTEGGFSVAFDPLD 564
CVNSFGDEQLAVDMLADKLLFEAL YSH CKYACSEE PEL DMGGP EGGFSVAFDPLD
Sbjct: 121 CVNSFGDEQLAVDMLADKLLFEALRYSHVCKYACSEEVPELQDMGGPVEGGFSVAFDPLD 180
Query: 565 GSSIVDTNFT 594
GSSIVDTNFT
Sbjct: 181 GSSIVDTNFT 190
>gb|AAO22558.1| sedoheptulose-1,7-bisphosphatase precursor [Oryza sativa (indica
cultivar-group)] gi|27804772|gb|AAO22559.1|
sedoheptulose-1,7-bisphosphatase precursor [Oryza sativa
(indica cultivar-group)]
Length = 392
Score = 236 bits (602), Expect = 2e-61
Identities = 131/189 (69%), Positives = 146/189 (76%), Gaps = 5/189 (2%)
Frame = +1
Query: 43 MET-GIACYTRGAFLPSVSSKHSPPSISPSFGFRSLKSSSLF-GESLRVSSKSTL---KV 207
MET A YTRGA S + + S S S+ ++ + S F GESLRV++ +L +
Sbjct: 1 METVAAASYTRGAATRSPACC-AAMSFSQSYRPKAARPPSTFYGESLRVNTARSLPSGRQ 59
Query: 208 SKTKGSTSLVTKCEIGDSLEEFLTKATPDKGLIRLLFSMGEALRTISFKVKTASCGGTQC 387
SK +L T+CEIGDSLEEFLTKATPDK LIRLL MGEA+RTISFKV+TASCGGT C
Sbjct: 60 SKAASRAALSTRCEIGDSLEEFLTKATPDKNLIRLLICMGEAMRTISFKVRTASCGGTAC 119
Query: 388 VNSFGDEQLAVDMLADKLLFEALTYSHFCKYACSEEHPELLDMGGPTEGGFSVAFDPLDG 567
VNSFGDEQLAVDMLADKLLFEAL YSH CKYACSEE PEL DMGGP +GGFSVAFDPLDG
Sbjct: 120 VNSFGDEQLAVDMLADKLLFEALEYSHVCKYACSEEVPELQDMGGPVDGGFSVAFDPLDG 179
Query: 568 SSIVDTNFT 594
SSIVDTNFT
Sbjct: 180 SSIVDTNFT 188
>sp|P46285|S17P_WHEAT Sedoheptulose-1,7-bisphosphatase, chloroplast precursor
(Sedoheptulose-bisphosphatase) (SBPASE) (SED(1,7)P2ASE)
gi|100803|pir||S23452 sedoheptulose-bisphosphatase (EC
3.1.3.37) precursor - wheat gi|14265|emb|CAA46507.1|
sedoheptulose-1,7-bisphosphatase [Triticum aestivum]
Length = 393
Score = 228 bits (582), Expect = 3e-59
Identities = 119/173 (68%), Positives = 132/173 (75%), Gaps = 4/173 (2%)
Frame = +1
Query: 88 SVSSKHSPPSISPSFGFRSLKSSSLFGESLRVSSKSTL----KVSKTKGSTSLVTKCEIG 255
S S + P + P+ +S +GESLR ++ T + SK +L T+C IG
Sbjct: 25 SFSQSYRPKAARPA--------TSFYGESLRANTARTSFPAGRQSKAASRAALTTRCAIG 76
Query: 256 DSLEEFLTKATPDKGLIRLLFSMGEALRTISFKVKTASCGGTQCVNSFGDEQLAVDMLAD 435
DSLEEFLTKATPDK LIRLL MGEA+RTI+FKV+TASCGGT CVNSFGDEQLAVDMLAD
Sbjct: 77 DSLEEFLTKATPDKNLIRLLICMGEAMRTIAFKVRTASCGGTACVNSFGDEQLAVDMLAD 136
Query: 436 KLLFEALTYSHFCKYACSEEHPELLDMGGPTEGGFSVAFDPLDGSSIVDTNFT 594
KLLFEAL YSH CKYACSEE PEL DMGGP EGGFSVAFDPLDGSSIVDTNFT
Sbjct: 137 KLLFEALEYSHVCKYACSEEVPELQDMGGPVEGGFSVAFDPLDGSSIVDTNFT 189
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 544,849,964
Number of Sequences: 1393205
Number of extensions: 11539416
Number of successful extensions: 38994
Number of sequences better than 10.0: 176
Number of HSP's better than 10.0 without gapping: 36414
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 38934
length of database: 448,689,247
effective HSP length: 117
effective length of database: 285,684,262
effective search space used: 23140425222
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
