Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC017805A_C01 KMC017805A_c01
(512 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_178517.1| hypothetical protein; protein id: At2g04360.1 [... 133 1e-30
ref|NP_488085.1| hypothetical protein [Nostoc sp. PCC 7120] gi|2... 64 8e-10
ref|NP_682441.1| ORF_ID:tll1651~hypothetical protein [Thermosyne... 61 7e-09
gb|ZP_00109610.1| hypothetical protein [Nostoc punctiforme] 60 2e-08
gb|AAO64398.1| hypothetical protein [Nodularia spumigena] 51 7e-06
>ref|NP_178517.1| hypothetical protein; protein id: At2g04360.1 [Arabidopsis
thaliana] gi|25411076|pir||F84456 hypothetical protein
At2g04360 [imported] - Arabidopsis thaliana
gi|4587614|gb|AAD25842.1| hypothetical protein
[Arabidopsis thaliana] gi|20198208|gb|AAM15461.1|
hypothetical protein [Arabidopsis thaliana]
Length = 295
Score = 133 bits (335), Expect = 1e-30
Identities = 58/70 (82%), Positives = 64/70 (90%)
Frame = -2
Query: 496 WKEFYQYFRESKFIHIMTIDFTLLSTLAPFWVYNDMTTRKWFDKGSWLLPVSLIPFLGPG 317
W EFYQYFRESKFIH+ ++DF LLS APFWVYNDMTTRKWFDKGSWLLPVS+IPFLGP
Sbjct: 211 WTEFYQYFRESKFIHVTSLDFCLLSAFAPFWVYNDMTTRKWFDKGSWLLPVSVIPFLGPS 270
Query: 316 LYLLLRPSLS 287
LYLLLRP++S
Sbjct: 271 LYLLLRPAVS 280
>ref|NP_488085.1| hypothetical protein [Nostoc sp. PCC 7120] gi|25341264|pir||AF2311
hypothetical protein alr4045 [imported] - Nostoc sp.
(strain PCC 7120) gi|17133180|dbj|BAB75744.1|
ORF_ID:alr4045~hypothetical protein [Nostoc sp. PCC
7120]
Length = 226
Score = 64.3 bits (155), Expect = 8e-10
Identities = 33/82 (40%), Positives = 46/82 (55%)
Frame = -2
Query: 496 WKEFYQYFRESKFIHIMTIDFTLLSTLAPFWVYNDMTTRKWFDKGSWLLPVSLIPFLGPG 317
W F Q ++ +FIH+M++DF LLS L P + +DMT R W K +LIP GP
Sbjct: 142 WSNFLQQWQTKRFIHVMSLDFCLLSLLFPALLGDDMTRRGW-QKPQLFWVFALIPLFGPL 200
Query: 316 LYLLLRPSLSTMAISQTPVEPE 251
LYL LRP L ++ +P+
Sbjct: 201 LYLCLRPPLPEASVDLLSSQPQ 222
>ref|NP_682441.1| ORF_ID:tll1651~hypothetical protein [Thermosynechococcus elongatus
BP-1] gi|22295376|dbj|BAC09203.1|
ORF_ID:tll1651~hypothetical protein [Thermosynechococcus
elongatus BP-1]
Length = 232
Score = 61.2 bits (147), Expect = 7e-09
Identities = 32/69 (46%), Positives = 45/69 (64%)
Frame = -2
Query: 496 WKEFYQYFRESKFIHIMTIDFTLLSTLAPFWVYNDMTTRKWFDKGSWLLPVSLIPFLGPG 317
W++F+Q + S+FIH+MT+DF LLS L P + +D R+ +K W SL+PF+G
Sbjct: 158 WQDFWQQWHSSRFIHVMTLDFCLLSLLLPVLLVDDW-QRRGLEKSPWRW-WSLVPFVGAL 215
Query: 316 LYLLLRPSL 290
YLLLRP L
Sbjct: 216 GYLLLRPPL 224
>gb|ZP_00109610.1| hypothetical protein [Nostoc punctiforme]
Length = 225
Score = 59.7 bits (143), Expect = 2e-08
Identities = 29/78 (37%), Positives = 48/78 (61%)
Frame = -2
Query: 496 WKEFYQYFRESKFIHIMTIDFTLLSTLAPFWVYNDMTTRKWFDKGSWLLPVSLIPFLGPG 317
W F Q ++ ++FI++M++DF+LLS L P + +DM R W + + L ++LIP GP
Sbjct: 142 WGNFVQQWQTNRFINVMSLDFSLLSLLFPALLGDDMARRGWKNPQIFWL-IALIPLFGPL 200
Query: 316 LYLLLRPSLSTMAISQTP 263
+YL +RP L + + P
Sbjct: 201 IYLCVRPPLPEVGVEAIP 218
>gb|AAO64398.1| hypothetical protein [Nodularia spumigena]
Length = 219
Score = 51.2 bits (121), Expect = 7e-06
Identities = 27/69 (39%), Positives = 43/69 (62%)
Frame = -2
Query: 496 WKEFYQYFRESKFIHIMTIDFTLLSTLAPFWVYNDMTTRKWFDKGSWLLPVSLIPFLGPG 317
W F Q ++ S+FIH+M++DF +LS L P + +DM R ++ + L ++LIP GP
Sbjct: 141 WGNFVQQWQTSRFIHVMSLDFCVLSLLFPALLGDDMARRGMKNQVFFWL-IALIPLFGPL 199
Query: 316 LYLLLRPSL 290
+YL +R L
Sbjct: 200 IYLSVRSPL 208
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 440,362,120
Number of Sequences: 1393205
Number of extensions: 9283838
Number of successful extensions: 21410
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 20969
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21402
length of database: 448,689,247
effective HSP length: 114
effective length of database: 289,863,877
effective search space used: 16232377112
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
