Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC017803A_C01 KMC017803A_c01
(631 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAN31921.1| putatative tyrosine aminotransferase [Arabidopsis... 207 1e-52
ref|NP_200208.1| tyrosine aminotransferase; protein id: At5g5397... 207 1e-52
emb|CAD30341.1| tyrosine aminotransferase [Solenostemon scutella... 204 8e-52
dbj|BAA96891.1| tyrosine aminotransferase-like protein [Arabidop... 165 5e-40
ref|NP_198465.2| putative protein; protein id: At5g36160.1, supp... 165 5e-40
>gb|AAN31921.1| putatative tyrosine aminotransferase [Arabidopsis thaliana]
Length = 414
Score = 207 bits (526), Expect = 1e-52
Identities = 100/142 (70%), Positives = 120/142 (84%)
Frame = -2
Query: 630 VVEHIKKYFDLLGGPATFIQAAVPRIIKQTEEVFFKKTVEILKYTSEICCKKIEDIPCIF 451
++E KKYFD+LGGPATFIQAAVP I++QT+E FFKKT+ LK +S+ICC I++IPCI
Sbjct: 269 IIERFKKYFDILGGPATFIQAAVPTILEQTDESFFKKTLNSLKNSSDICCDWIKEIPCID 328
Query: 450 CPCKPEGSMAMMVKLNLSLLEDISDDIDFSFKLAKEESVIILPGTAVGLKDWLRITFAAD 271
+PEGSMAMMVKLNLSLLED+SDDIDF FKLA+EESVI+LPGTAVGLK+WLRITFAAD
Sbjct: 329 SSHRPEGSMAMMVKLNLSLLEDVSDDIDFCFKLAREESVILLPGTAVGLKNWLRITFAAD 388
Query: 270 PSALAEGMDRIQCFCQRHAKKQ 205
+++ E RI+CF RHAK Q
Sbjct: 389 ATSIEEAFKRIKCFYLRHAKTQ 410
>ref|NP_200208.1| tyrosine aminotransferase; protein id: At5g53970.1 [Arabidopsis
thaliana] gi|10177259|dbj|BAB10727.1| tyrosine
aminotransferase [Arabidopsis thaliana]
gi|25054842|gb|AAN71911.1| putative tyrosine
aminotransferase [Arabidopsis thaliana]
Length = 414
Score = 207 bits (526), Expect = 1e-52
Identities = 100/142 (70%), Positives = 120/142 (84%)
Frame = -2
Query: 630 VVEHIKKYFDLLGGPATFIQAAVPRIIKQTEEVFFKKTVEILKYTSEICCKKIEDIPCIF 451
++E KKYFD+LGGPATFIQAAVP I++QT+E FFKKT+ LK +S+ICC I++IPCI
Sbjct: 269 IIERFKKYFDILGGPATFIQAAVPTILEQTDESFFKKTLNSLKNSSDICCDWIKEIPCID 328
Query: 450 CPCKPEGSMAMMVKLNLSLLEDISDDIDFSFKLAKEESVIILPGTAVGLKDWLRITFAAD 271
+PEGSMAMMVKLNLSLLED+SDDIDF FKLA+EESVI+LPGTAVGLK+WLRITFAAD
Sbjct: 329 SSHRPEGSMAMMVKLNLSLLEDVSDDIDFCFKLAREESVILLPGTAVGLKNWLRITFAAD 388
Query: 270 PSALAEGMDRIQCFCQRHAKKQ 205
+++ E RI+CF RHAK Q
Sbjct: 389 ATSIEEAFKRIKCFYLRHAKTQ 410
>emb|CAD30341.1| tyrosine aminotransferase [Solenostemon scutellarioides]
Length = 411
Score = 204 bits (519), Expect = 8e-52
Identities = 97/138 (70%), Positives = 118/138 (85%)
Frame = -2
Query: 627 VEHIKKYFDLLGGPATFIQAAVPRIIKQTEEVFFKKTVEILKYTSEICCKKIEDIPCIFC 448
VE IKKY D+ GGPATFIQAAVP I++QT+EVFF+KT+ IL+ TS+ICC+KIE+I I C
Sbjct: 273 VERIKKYCDICGGPATFIQAAVPEIVEQTQEVFFRKTINILRQTSDICCQKIEEIDGITC 332
Query: 447 PCKPEGSMAMMVKLNLSLLEDISDDIDFSFKLAKEESVIILPGTAVGLKDWLRITFAADP 268
P KP+G+MA MVKLN+S ++DISDDIDF FKLAKEESVIILPG AVGL +WLRITFA +P
Sbjct: 333 PTKPKGAMAFMVKLNISRMKDISDDIDFCFKLAKEESVIILPGIAVGLNNWLRITFAVEP 392
Query: 267 SALAEGMDRIQCFCQRHA 214
SAL E M+R++ FC RH+
Sbjct: 393 SALEEAMERLKSFCIRHS 410
>dbj|BAA96891.1| tyrosine aminotransferase-like protein [Arabidopsis thaliana]
Length = 420
Score = 165 bits (417), Expect = 5e-40
Identities = 81/128 (63%), Positives = 98/128 (76%)
Frame = -2
Query: 588 PATFIQAAVPRIIKQTEEVFFKKTVEILKYTSEICCKKIEDIPCIFCPCKPEGSMAMMVK 409
PATFIQ A+P II T+E FF +E++K +EIC +++ IPCI CPCKPEGSM MVK
Sbjct: 292 PATFIQGAMPDIIGNTKEEFFSSKLEMVKKCAEICYEELMKIPCITCPCKPEGSMFTMVK 351
Query: 408 LNLSLLEDISDDIDFSFKLAKEESVIILPGTAVGLKDWLRITFAADPSALAEGMDRIQCF 229
LN SLLEDISDD+DF KLAKEES+IILPG AVGLK+WLRITFA + L EG R++ F
Sbjct: 352 LNFSLLEDISDDLDFCSKLAKEESMIILPGQAVGLKNWLRITFAVELELLIEGFSRLKNF 411
Query: 228 CQRHAKKQ 205
+RH+K Q
Sbjct: 412 TERHSKNQ 419
>ref|NP_198465.2| putative protein; protein id: At5g36160.1, supported by cDNA:
gi_17065497, supported by cDNA: gi_20148640 [Arabidopsis
thaliana] gi|17065498|gb|AAL32903.1| tyrosine
aminotransferase-like protein [Arabidopsis thaliana]
gi|20148641|gb|AAM10211.1| tyrosine
aminotransferase-like protein [Arabidopsis thaliana]
Length = 186
Score = 165 bits (417), Expect = 5e-40
Identities = 81/128 (63%), Positives = 98/128 (76%)
Frame = -2
Query: 588 PATFIQAAVPRIIKQTEEVFFKKTVEILKYTSEICCKKIEDIPCIFCPCKPEGSMAMMVK 409
PATFIQ A+P II T+E FF +E++K +EIC +++ IPCI CPCKPEGSM MVK
Sbjct: 58 PATFIQGAMPDIIGNTKEEFFSSKLEMVKKCAEICYEELMKIPCITCPCKPEGSMFTMVK 117
Query: 408 LNLSLLEDISDDIDFSFKLAKEESVIILPGTAVGLKDWLRITFAADPSALAEGMDRIQCF 229
LN SLLEDISDD+DF KLAKEES+IILPG AVGLK+WLRITFA + L EG R++ F
Sbjct: 118 LNFSLLEDISDDLDFCSKLAKEESMIILPGQAVGLKNWLRITFAVELELLIEGFSRLKNF 177
Query: 228 CQRHAKKQ 205
+RH+K Q
Sbjct: 178 TERHSKNQ 185
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 529,348,110
Number of Sequences: 1393205
Number of extensions: 11236268
Number of successful extensions: 31415
Number of sequences better than 10.0: 135
Number of HSP's better than 10.0 without gapping: 30220
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31378
length of database: 448,689,247
effective HSP length: 118
effective length of database: 284,291,057
effective search space used: 25870486187
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
