Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC017800A_C01 KMC017800A_c01
(411 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAA06243.1| pre-pro-TPE4A protein [Pisum sativum] 80 6e-15
emb|CAA84378.1| cysteine proteinase [Vicia sativa] 78 2e-14
gb|AAC35211.1| cysteine proteinase [Hemerocallis hybrid cultivar] 77 4e-14
ref|NP_568722.1| cysteine proteinase; protein id: At5g50260.1, s... 76 1e-13
pir||T06208 cysteine proteinase (EC 3.4.22.-) - barley gi|222481... 75 1e-13
>emb|CAA06243.1| pre-pro-TPE4A protein [Pisum sativum]
Length = 360
Score = 80.1 bits (196), Expect = 6e-15
Identities = 39/56 (69%), Positives = 44/56 (77%), Gaps = 7/56 (12%)
Frame = -2
Query: 410 IVKNSWGTDWGEPGYLRMKRGISKKPGLCGIAMEASYPIQ-------SSPTLKDEL 264
IVKNSWG++WGE GY+RM+RGIS K GLCGIAMEASYPI+ S TLKDEL
Sbjct: 305 IVKNSWGSEWGEQGYIRMQRGISHKEGLCGIAMEASYPIKKSSTNPTESSTLKDEL 360
>emb|CAA84378.1| cysteine proteinase [Vicia sativa]
Length = 359
Score = 78.2 bits (191), Expect = 2e-14
Identities = 37/56 (66%), Positives = 44/56 (78%), Gaps = 7/56 (12%)
Frame = -2
Query: 410 IVKNSWGTDWGEPGYLRMKRGISKKPGLCGIAMEASYPIQSSPT-------LKDEL 264
I+KNSWG++WGE GY+RM+RGIS + GLCGIAMEASYPI+ S T LKDEL
Sbjct: 304 IMKNSWGSEWGEQGYIRMQRGISSREGLCGIAMEASYPIKKSSTKPTESSILKDEL 359
>gb|AAC35211.1| cysteine proteinase [Hemerocallis hybrid cultivar]
Length = 359
Score = 77.4 bits (189), Expect = 4e-14
Identities = 38/55 (69%), Positives = 42/55 (76%), Gaps = 6/55 (10%)
Frame = -2
Query: 410 IVKNSWGTDWGEPGYLRMKRGISKKPGLCGIAMEASYPIQSSP------TLKDEL 264
IVKNSWG WGE GY+RM+RGI K G CGIAMEASYPI+SSP +LKDEL
Sbjct: 305 IVKNSWGEGWGESGYIRMERGIKDKRGKCGIAMEASYPIKSSPNPKKAESLKDEL 359
>ref|NP_568722.1| cysteine proteinase; protein id: At5g50260.1, supported by cDNA:
gi_20258849 [Arabidopsis thaliana]
gi|9759028|dbj|BAB09397.1| cysteine endopeptidase
[Arabidopsis thaliana] gi|20258850|gb|AAM13907.1|
putative cysteine proteinase [Arabidopsis thaliana]
Length = 361
Score = 75.9 bits (185), Expect = 1e-13
Identities = 37/58 (63%), Positives = 43/58 (73%), Gaps = 9/58 (15%)
Frame = -2
Query: 410 IVKNSWGTDWGEPGYLRMKRGISKKPGLCGIAMEASYPIQSSPT---------LKDEL 264
IVKNSWG +WGE GY+RM+RGI K GLCGIAMEASYP+++S T LKDEL
Sbjct: 304 IVKNSWGEEWGEKGYIRMQRGIRHKEGLCGIAMEASYPLKNSNTNPSRLSLDSLKDEL 361
>pir||T06208 cysteine proteinase (EC 3.4.22.-) - barley
gi|2224812|emb|CAB09699.1| cysteine endopeptidase EP-A
[Hordeum vulgare subsp. vulgare]
Length = 365
Score = 75.5 bits (184), Expect = 1e-13
Identities = 33/51 (64%), Positives = 43/51 (83%), Gaps = 3/51 (5%)
Frame = -2
Query: 410 IVKNSWGTDWGEPGYLRMKRGISKKPGLCGIAMEASYPIQSSP---TLKDE 267
IVKNSWG DWGE GY+RM+RG+S+ GLCGIAM+ASYP +S+P T+++E
Sbjct: 309 IVKNSWGEDWGEKGYIRMQRGVSQTEGLCGIAMQASYPTKSAPHASTVREE 359
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 376,318,461
Number of Sequences: 1393205
Number of extensions: 7860288
Number of successful extensions: 15666
Number of sequences better than 10.0: 891
Number of HSP's better than 10.0 without gapping: 15240
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15481
length of database: 448,689,247
effective HSP length: 112
effective length of database: 292,650,287
effective search space used: 7023606888
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
