Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC017713A_C01 KMC017713A_c01
(555 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_193254.1| hypothetical protein [Arabidopsis thaliana] gi|... 37 0.21
gb|EAA33811.1| predicted protein [Neurospora crassa] 35 0.61
gb|EAA36529.1| hypothetical protein [Neurospora crassa] 35 0.80
ref|NP_031855.1| Fas death domain-associated protein [Mus muscul... 34 1.0
gb|AAC97971.1| Fas-binding protein [Mus musculus] 34 1.4
>ref|NP_193254.1| hypothetical protein [Arabidopsis thaliana] gi|7485197|pir||H71415
hypothetical protein - Arabidopsis thaliana
gi|2244877|emb|CAB10298.1| hypothetical protein
[Arabidopsis thaliana] gi|7268265|emb|CAB78561.1|
hypothetical protein [Arabidopsis thaliana]
Length = 130
Score = 36.6 bits (83), Expect = 0.21
Identities = 25/65 (38%), Positives = 34/65 (51%)
Frame = -3
Query: 541 KTLRAVKSSQRKEALSVPSSPDTRHQQSPPAPSDLHRRLFPAIAGRRIVEDSSSDDDDDD 362
+T + S +KE S T + P+P D +RLFPAIA RR+ DSS D DD++
Sbjct: 75 ETTKTTNHSGKKE------SEMTTSDSNQPSP-DFRQRLFPAIAERRM--DSSDDSDDEE 125
Query: 361 HKEGS 347
S
Sbjct: 126 DSSPS 130
>gb|EAA33811.1| predicted protein [Neurospora crassa]
Length = 564
Score = 35.0 bits (79), Expect = 0.61
Identities = 20/69 (28%), Positives = 32/69 (45%)
Frame = +1
Query: 349 SPPCDHHHHHQS*SPQLFSAPQSPEIAAYADQKVPAATADDECQEKTARKEPLSSEKTSP 528
+PP HH QS PQ S PQ P+ + Q++ + +P + +T+P
Sbjct: 358 APP---HHASQSGQPQHASVPQPPQ--------------QQQAQQQQPQVQPHQAAQTAP 400
Query: 529 PSESYPSPP 555
P++ P PP
Sbjct: 401 PAQQTPVPP 409
>gb|EAA36529.1| hypothetical protein [Neurospora crassa]
Length = 3409
Score = 34.7 bits (78), Expect = 0.80
Identities = 15/47 (31%), Positives = 26/47 (54%)
Frame = -3
Query: 493 VPSSPDTRHQQSPPAPSDLHRRLFPAIAGRRIVEDSSSDDDDDDHKE 353
+P++ + R + PPA R P A + +++ SSD +DDD +E
Sbjct: 3267 IPANEEERAKTEPPAKKKATRARPPRAARKAAIKEESSDKEDDDEEE 3313
>ref|NP_031855.1| Fas death domain-associated protein [Mus musculus]
gi|24636788|sp|O35613|DAXX_MOUSE Death domain-associated
protein 6 (Daxx) gi|2253707|gb|AAC53284.1| Daxx [Mus
musculus]
Length = 739
Score = 34.3 bits (77), Expect = 1.0
Identities = 20/71 (28%), Positives = 30/71 (42%), Gaps = 3/71 (4%)
Frame = -3
Query: 550 VRDKTLRAVKSSQRKEALSV---PSSPDTRHQQSPPAPSDLHRRLFPAIAGRRIVEDSSS 380
++DKT + +R L PS P +S PS + + P + +D
Sbjct: 388 MQDKTEEGERQKRRARLLGTAPQPSDPPQASSESGEGPSGMASQECPTTSKAETDDDDDD 447
Query: 379 DDDDDDHKEGS 347
DDDDD+ E S
Sbjct: 448 DDDDDEDNEES 458
>gb|AAC97971.1| Fas-binding protein [Mus musculus]
Length = 740
Score = 33.9 bits (76), Expect = 1.4
Identities = 20/72 (27%), Positives = 29/72 (39%), Gaps = 3/72 (4%)
Frame = -3
Query: 550 VRDKTLRAVKSSQRKEALSV---PSSPDTRHQQSPPAPSDLHRRLFPAIAGRRIVEDSSS 380
++DKT + +R L PS P +S PS + + P + +D
Sbjct: 388 MQDKTEEGERQKRRARLLGTAPQPSDPPKASSESGEGPSGMASQECPTTSKAETDDDDDD 447
Query: 379 DDDDDDHKEGSS 344
DDDDDD S
Sbjct: 448 DDDDDDEDNEES 459
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 450,999,259
Number of Sequences: 1393205
Number of extensions: 9402504
Number of successful extensions: 59782
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 49116
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 57718
length of database: 448,689,247
effective HSP length: 116
effective length of database: 287,077,467
effective search space used: 19521267756
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
