Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC017675A_C01 KMC017675A_c01
(481 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAM63621.1| flavonol synthase-like protein [Arabidopsis thali... 128 4e-29
ref|NP_566930.1| flavonol synthase - like protein; protein id: A... 128 4e-29
ref|NP_190532.1| putative protein; protein id: At3g49630.1 [Arab... 125 3e-28
gb|AAF34802.1|AF228663_1 putative flavonol synthase-like protein... 124 7e-28
gb|AAL87324.1| unknown protein [Arabidopsis thaliana] 115 2e-25
>gb|AAM63621.1| flavonol synthase-like protein [Arabidopsis thaliana]
Length = 332
Score = 128 bits (321), Expect = 4e-29
Identities = 64/89 (71%), Positives = 69/89 (76%), Gaps = 4/89 (4%)
Frame = -2
Query: 462 PVPGSFVCNIGDMLKIYSNGLYESTLHRVINNSTKYRVSVVFFYETNFDTAVEPLDTQKT 283
P+PGSFVCNIGDMLKI SNG+YESTLHRVINNS +YRV V FFYETNFD VEPLD K
Sbjct: 242 PIPGSFVCNIGDMLKILSNGVYESTLHRVINNSPQYRVCVAFFYETNFDAVVEPLDICKQ 301
Query: 282 RINGN----NKFERAVYGEHLVRKVLTNF 208
+ G F+RAVYGEHLV KV TNF
Sbjct: 302 KYPGGRGGCQVFKRAVYGEHLVSKVQTNF 330
>ref|NP_566930.1| flavonol synthase - like protein; protein id: At3g50210.1,
supported by cDNA: 25787. [Arabidopsis thaliana]
Length = 332
Score = 128 bits (321), Expect = 4e-29
Identities = 64/89 (71%), Positives = 69/89 (76%), Gaps = 4/89 (4%)
Frame = -2
Query: 462 PVPGSFVCNIGDMLKIYSNGLYESTLHRVINNSTKYRVSVVFFYETNFDTAVEPLDTQKT 283
P+PGSFVCNIGDMLKI SNG+YESTLHRVINNS +YRV V FFYETNFD VEPLD K
Sbjct: 242 PIPGSFVCNIGDMLKILSNGVYESTLHRVINNSPQYRVCVAFFYETNFDAVVEPLDICKQ 301
Query: 282 RINGN----NKFERAVYGEHLVRKVLTNF 208
+ G F+RAVYGEHLV KV TNF
Sbjct: 302 KYPGGRGGCQVFKRAVYGEHLVSKVQTNF 330
>ref|NP_190532.1| putative protein; protein id: At3g49630.1 [Arabidopsis thaliana]
gi|11255906|pir||T46240 hypothetical protein T9C5.220 -
Arabidopsis thaliana gi|6561963|emb|CAB62467.1| putative
protein [Arabidopsis thaliana]
Length = 369
Score = 125 bits (313), Expect = 3e-28
Identities = 62/88 (70%), Positives = 69/88 (77%), Gaps = 3/88 (3%)
Frame = -2
Query: 462 PVPGSFVCNIGDMLKIYSNGLYESTLHRVINNSTKYRVSVVFFYETNFDTAVEPLDTQKT 283
P+PGSFVCNIGDMLKI SNG+YESTLHRVINNS +YRV V FFYETNFD AVEPLD K
Sbjct: 275 PIPGSFVCNIGDMLKILSNGVYESTLHRVINNSPRYRVCVGFFYETNFDAAVEPLDIFKE 334
Query: 282 RING---NNKFERAVYGEHLVRKVLTNF 208
+ G + F+R VYGEHLV K+ T F
Sbjct: 335 KYPGKGTSQVFKRVVYGEHLVHKLQTTF 362
>gb|AAF34802.1|AF228663_1 putative flavonol synthase-like protein [Euphorbia esula]
Length = 329
Score = 124 bits (310), Expect = 7e-28
Identities = 56/87 (64%), Positives = 69/87 (78%)
Frame = -2
Query: 468 SPPVPGSFVCNIGDMLKIYSNGLYESTLHRVINNSTKYRVSVVFFYETNFDTAVEPLDTQ 289
+PP+PG+FVCNIGDMLKI+SNGLY+STLHRV+NNS KYRV V +F+E NFD A+EP +
Sbjct: 242 APPIPGTFVCNIGDMLKIWSNGLYDSTLHRVVNNSPKYRVCVAYFHEPNFDAAIEPSEFC 301
Query: 288 KTRINGNNKFERAVYGEHLVRKVLTNF 208
+ G + +AVYGEHLV KV TNF
Sbjct: 302 VKKTGGTRRSGKAVYGEHLVSKVQTNF 328
>gb|AAL87324.1| unknown protein [Arabidopsis thaliana]
Length = 355
Score = 115 bits (289), Expect = 2e-25
Identities = 56/88 (63%), Positives = 66/88 (74%), Gaps = 3/88 (3%)
Frame = -2
Query: 462 PVPGSFVCNIGDMLKIYSNGLYESTLHRVINNSTKYRVSVVFFYETNFDTAVEPLDTQK- 286
P+PGSF+CNIGDML I SNG+Y+STLH+VINNS KYRV V FFYETNF+ VEPLD K
Sbjct: 261 PIPGSFICNIGDMLTILSNGVYQSTLHKVINNSPKYRVCVAFFYETNFEAEVEPLDIFKE 320
Query: 285 --TRINGNNKFERAVYGEHLVRKVLTNF 208
R + +R VYG+HL+ KVLT F
Sbjct: 321 KHPRKETSQVAKRVVYGQHLINKVLTTF 348
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 390,753,013
Number of Sequences: 1393205
Number of extensions: 7310305
Number of successful extensions: 16088
Number of sequences better than 10.0: 551
Number of HSP's better than 10.0 without gapping: 15664
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16072
length of database: 448,689,247
effective HSP length: 113
effective length of database: 291,257,082
effective search space used: 13397825772
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
