Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC017672A_C01 KMC017672A_c01
(574 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_282190.1| putative transmembrane transport protein [Campy... 32 4.3
emb|CAC28650.1| probable mitochondrial carrier protein ARALAR1 [... 32 5.7
ref|NP_001106.1| adenylate cyclase 8; Adenylyl cyclase-8, brain ... 32 7.4
pir||S48687 type VIII adenylyl cyclase - human 32 7.4
ref|NP_702115.1| hypothetical protein [Plasmodium falciparum 3D7... 32 7.4
>ref|NP_282190.1| putative transmembrane transport protein [Campylobacter jejuni]
gi|11347183|pir||E81306 probable transmembrane transport
protein Cj1040c [imported] - Campylobacter jejuni
(strain NCTC 11168) gi|6968476|emb|CAB73296.1| putative
transmembrane transport protein [Campylobacter jejuni
subsp. jejuni NCTC 11168]
Length = 387
Score = 32.3 bits (72), Expect = 4.3
Identities = 21/76 (27%), Positives = 39/76 (50%), Gaps = 3/76 (3%)
Frame = +2
Query: 329 PRISVTIVNGTSFRNKIESLKGFPLLY-LARFLFFFHVLKLSQK--SMFESSNIWRLSAL 499
P +SV + G F I S + Y A+ FF + K + K ++F + W+++
Sbjct: 150 PLLSVFDLAGAMFFWAIFSFVALVVYYPQAKNGRFFRIKKKTHKKINLFTNLTTWKITLF 209
Query: 500 V*FEAFLSYFWFCWWI 547
+ F++FL+Y F W++
Sbjct: 210 MGFQSFLAYSLFFWYV 225
>emb|CAC28650.1| probable mitochondrial carrier protein ARALAR1 [Neurospora crassa]
gi|28923154|gb|EAA32371.1| hypothetical protein (
(AL513442) probable mitochondrial carrier protein
ARALAR1 [Neurospora crassa] )
Length = 706
Score = 32.0 bits (71), Expect = 5.7
Identities = 21/69 (30%), Positives = 32/69 (45%)
Frame = -3
Query: 245 KMQNFRKLFQTQKAFPNPNARKLELEWE*SFPNSPTTREVIKKQSF*ASERVYLGERERE 66
K +FR+L++ K PN + EW + S T R + Q F R GER R+
Sbjct: 126 KYDDFRRLYELNKG-PNSIPFDWDCEWAKLYIGSKTKRHNLDYQQFSQMLRGLQGERIRQ 184
Query: 65 RHKISDPNG 39
++ D +G
Sbjct: 185 AFQLFDKDG 193
>ref|NP_001106.1| adenylate cyclase 8; Adenylyl cyclase-8, brain [Homo sapiens]
gi|729242|sp|P40145|CYA8_HUMAN Adenylate cyclase, type
VIII (ATP pyrophosphate-lyase) (Ca(2+)/calmodulin
activated adenylyl cyclase) gi|516263|emb|CAA84552.1|
adenylyl cyclase [Homo sapiens]
Length = 1251
Score = 31.6 bits (70), Expect = 7.4
Identities = 22/73 (30%), Positives = 32/73 (43%), Gaps = 21/73 (28%)
Frame = +3
Query: 162 LPLKFQFPCIWIRKSLLG----------LKELPEILHLFWCPFEK----WSLGFN----- 284
LPL + C WI ++ L + L IL++ WC F+K +L FN
Sbjct: 767 LPLILRKTCCWINETYLARNVIIFASILINFLGAILNILWCDFDKSIPLKNLTFNSSAVF 826
Query: 285 --LCSYCSYMCFS 317
+CSY Y F+
Sbjct: 827 TDICSYPEYFVFT 839
>pir||S48687 type VIII adenylyl cyclase - human
Length = 1251
Score = 31.6 bits (70), Expect = 7.4
Identities = 22/73 (30%), Positives = 32/73 (43%), Gaps = 21/73 (28%)
Frame = +3
Query: 162 LPLKFQFPCIWIRKSLLG----------LKELPEILHLFWCPFEK----WSLGFN----- 284
LPL + C WI ++ L + L IL++ WC F+K +L FN
Sbjct: 767 LPLILRKTCCWINETYLARNVIIFASILINFLGAILNILWCDFDKSIPLKNLTFNSSAVF 826
Query: 285 --LCSYCSYMCFS 317
+CSY Y F+
Sbjct: 827 TDICSYPEYFVFT 839
>ref|NP_702115.1| hypothetical protein [Plasmodium falciparum 3D7]
gi|23497293|gb|AAN36839.1|AE014819_50 hypothetical
protein [Plasmodium falciparum 3D7]
Length = 1621
Score = 31.6 bits (70), Expect = 7.4
Identities = 20/65 (30%), Positives = 32/65 (48%), Gaps = 4/65 (6%)
Frame = -1
Query: 292 LHRLKPSDHFSNGHQKRCKISGSSFRPRRLFLIQMQG----NWNLSGSDHSQIHLPPEKL 125
++ K + SN + K+S + +L + M G N N+SG S I++P EKL
Sbjct: 1211 MNTTKMLEKLSNVNMSSEKLSNVNMSGEKLSNVNMSGEKLSNVNMSGEKLSNINMPGEKL 1270
Query: 124 SKSNL 110
S N+
Sbjct: 1271 SNVNM 1275
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 488,145,394
Number of Sequences: 1393205
Number of extensions: 10303927
Number of successful extensions: 27128
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 25953
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27043
length of database: 448,689,247
effective HSP length: 116
effective length of database: 287,077,467
effective search space used: 21243732558
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
