Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC017596A_C01 KMC017596A_c01
(652 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_199827.2| FRO1 and FRO2-like protein; protein id: At5g501... 39 0.061
dbj|BAB09387.1| FRO1 and FRO2-like protein [Arabidopsis thaliana] 39 0.061
gb|AAF62868.1|AF169312_1 hepatic angiopoietin-related protein [H... 35 0.67
dbj|BAB40692.1| angiopoietin-related protein 4 [Homo sapiens] 35 0.67
ref|NP_057193.2| angiopoietin-like 4 protein; hepatic angiopoiet... 35 0.67
>ref|NP_199827.2| FRO1 and FRO2-like protein; protein id: At5g50160.1, supported by
cDNA: gi_18377667 [Arabidopsis thaliana]
gi|18377668|gb|AAL66984.1| putative FRO1 and FRO2
protein [Arabidopsis thaliana]
gi|27754744|gb|AAO22815.1| putative FRO1 and FRO2
protein [Arabidopsis thaliana]
Length = 728
Score = 38.9 bits (89), Expect = 0.061
Identities = 16/26 (61%), Positives = 21/26 (80%)
Frame = -3
Query: 650 VLVCGPETMKESVASACQPKSQCFNL 573
VLVCGPE++KE+VAS C+ QCF +
Sbjct: 682 VLVCGPESVKEAVASMCRQWPQCFGV 707
>dbj|BAB09387.1| FRO1 and FRO2-like protein [Arabidopsis thaliana]
Length = 713
Score = 38.9 bits (89), Expect = 0.061
Identities = 16/26 (61%), Positives = 21/26 (80%)
Frame = -3
Query: 650 VLVCGPETMKESVASACQPKSQCFNL 573
VLVCGPE++KE+VAS C+ QCF +
Sbjct: 667 VLVCGPESVKEAVASMCRQWPQCFGV 692
>gb|AAF62868.1|AF169312_1 hepatic angiopoietin-related protein [Homo sapiens]
Length = 406
Score = 35.4 bits (80), Expect = 0.67
Identities = 19/55 (34%), Positives = 29/55 (52%)
Frame = +1
Query: 355 RKSKIFTRRLKGGWTFSSTDI*SYTNLNGKHTGTKSLNNSRLGISIFWCPTWTGK 519
R+ K + L GGW F + S++NLNG++ + +L IFW TW G+
Sbjct: 336 RRDKNCAKSLSGGWWFGTC---SHSNLNGQYFRSIPQQRQKLKKGIFW-KTWRGR 386
>dbj|BAB40692.1| angiopoietin-related protein 4 [Homo sapiens]
Length = 406
Score = 35.4 bits (80), Expect = 0.67
Identities = 19/55 (34%), Positives = 29/55 (52%)
Frame = +1
Query: 355 RKSKIFTRRLKGGWTFSSTDI*SYTNLNGKHTGTKSLNNSRLGISIFWCPTWTGK 519
R+ K + L GGW F + S++NLNG++ + +L IFW TW G+
Sbjct: 336 RRDKNCAKSLSGGWWFGTC---SHSNLNGQYFRSIPQQRQKLKKGIFW-KTWRGR 386
>ref|NP_057193.2| angiopoietin-like 4 protein; hepatic angiopoietin-related protein;
PPARG angiopoietin related protein; fasting-induced
adipose factor; hepatic fibrinogen/angiopoietin-related
protein [Homo sapiens] gi|21536398|ref|NP_647475.1|
angiopoietin-like 4 protein; hepatic
angiopoietin-related protein; PPARG angiopoietin related
protein; fasting-induced adipose factor; hepatic
fibrinogen/angiopoietin-related protein [Homo sapiens]
gi|25008123|sp|Q9BY76|ANL4_HUMAN Angiopoietin-related
protein 4 precursor (Angiopoietin-like 4) (Hepatic
fibrinogen/angiopoietin-related protein) (HFARP)
(Angiopoietin-like protein PP1158)
gi|10732648|gb|AAG22490.1|AF202636_1 angiopoietin-like
protein PP1158 [Homo sapiens] gi|23271126|gb|AAH23647.1|
angiopoietin-like 4 [Homo sapiens]
Length = 406
Score = 35.4 bits (80), Expect = 0.67
Identities = 19/55 (34%), Positives = 29/55 (52%)
Frame = +1
Query: 355 RKSKIFTRRLKGGWTFSSTDI*SYTNLNGKHTGTKSLNNSRLGISIFWCPTWTGK 519
R+ K + L GGW F + S++NLNG++ + +L IFW TW G+
Sbjct: 336 RRDKNCAKSLSGGWWFGTC---SHSNLNGQYFRSIPQQRQKLKKGIFW-KTWRGR 386
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 592,250,348
Number of Sequences: 1393205
Number of extensions: 13055509
Number of successful extensions: 41813
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 40436
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 41795
length of database: 448,689,247
effective HSP length: 118
effective length of database: 284,291,057
effective search space used: 27860523586
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
