Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC017585A_C01 KMC017585A_c01
(458 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||T08551 Ca2+-transporting ATPase homolog F27B13.140 - Arabid... 122 1e-27
ref|NP_194719.1| potential calcium-transporting ATPase 10, plasm... 122 1e-27
sp|Q9LU41|ACA9_ARATH Potential calcium-transporting ATPase 9, pl... 108 3e-23
ref|NP_188755.2| potential calcium-transporting ATPase 9, plasma... 108 3e-23
dbj|BAC56802.1| putative Calcium-transporting ATPase 8, plasma m... 103 8e-22
>pir||T08551 Ca2+-transporting ATPase homolog F27B13.140 - Arabidopsis thaliana
gi|4914414|emb|CAB43665.1| Ca2+-transporting ATPase-like
protein [Arabidopsis thaliana]
Length = 1093
Score = 122 bits (307), Expect = 1e-27
Identities = 68/107 (63%), Positives = 83/107 (77%)
Frame = +1
Query: 112 MNFQNGSSPRRASAAAENDIEAGPATRRSSDFDDVDVNDPFDIARTKHASVERLRRWRQA 291
M+ Q +SPR + D+EAG T ++++D PFDIA TK+A VERLRRWRQA
Sbjct: 1 MSGQFNNSPR----GEDKDVEAG--TSSFTEYED----SPFDIASTKNAPVERLRRWRQA 50
Query: 292 ALVLNASRRFRYTLDLKKEEEKKHILRKIRAHAQAIRAAYLFKAATT 432
ALVLNASRRFRYTLDLK+EE+KK +LRK+RAHAQAIRAA+LFKAA +
Sbjct: 51 ALVLNASRRFRYTLDLKREEDKKQMLRKMRAHAQAIRAAHLFKAAAS 97
>ref|NP_194719.1| potential calcium-transporting ATPase 10, plasma membrane-type
(Ca2+-ATPase, isoform 10); protein id: At4g29900.1
[Arabidopsis thaliana] gi|12643856|sp|Q9SZR1|ACAA_ARATH
Potential calcium-transporting ATPase 10, plasma
membrane-type (Ca2+-ATPase, isoform 10)
gi|25290667|pir||C85349 Ca2+-transporting ATPase-like
protein [imported] - Arabidopsis thaliana
gi|7269889|emb|CAB79748.1| Ca2+-transporting ATPase-like
protein [Arabidopsis thaliana]
Length = 1069
Score = 122 bits (307), Expect = 1e-27
Identities = 68/107 (63%), Positives = 83/107 (77%)
Frame = +1
Query: 112 MNFQNGSSPRRASAAAENDIEAGPATRRSSDFDDVDVNDPFDIARTKHASVERLRRWRQA 291
M+ Q +SPR + D+EAG T ++++D PFDIA TK+A VERLRRWRQA
Sbjct: 1 MSGQFNNSPR----GEDKDVEAG--TSSFTEYED----SPFDIASTKNAPVERLRRWRQA 50
Query: 292 ALVLNASRRFRYTLDLKKEEEKKHILRKIRAHAQAIRAAYLFKAATT 432
ALVLNASRRFRYTLDLK+EE+KK +LRK+RAHAQAIRAA+LFKAA +
Sbjct: 51 ALVLNASRRFRYTLDLKREEDKKQMLRKMRAHAQAIRAAHLFKAAAS 97
>sp|Q9LU41|ACA9_ARATH Potential calcium-transporting ATPase 9, plasma membrane-type
(Ca2+-ATPase, isoform 9) gi|9280219|dbj|BAB01709.1|
Ca2+-transporting ATPase [Arabidopsis thaliana]
Length = 1073
Score = 108 bits (270), Expect = 3e-23
Identities = 61/91 (67%), Positives = 69/91 (75%), Gaps = 3/91 (3%)
Frame = +1
Query: 163 NDIEAGPA-TRRSSDFDDV--DVNDPFDIARTKHASVERLRRWRQAALVLNASRRFRYTL 333
+D+EAG A T SD +++ D +DPFDI TK+ASVE LRRWRQAALVLNASRRFRYTL
Sbjct: 6 DDMEAGSAKTEEHSDHEELQHDPDDPFDIDNTKNASVESLRRWRQAALVLNASRRFRYTL 65
Query: 334 DLKKEEEKKHILRKIRAHAQAIRAAYLFKAA 426
DL KEE + R IRAHAQ IRAA LFK A
Sbjct: 66 DLNKEEHYDNRRRMIRAHAQVIRAALLFKLA 96
>ref|NP_188755.2| potential calcium-transporting ATPase 9, plasma membrane-type
(Ca2+-ATPase, isoform 9); protein id: At3g21180.1
[Arabidopsis thaliana]
Length = 1086
Score = 108 bits (270), Expect = 3e-23
Identities = 61/91 (67%), Positives = 69/91 (75%), Gaps = 3/91 (3%)
Frame = +1
Query: 163 NDIEAGPA-TRRSSDFDDV--DVNDPFDIARTKHASVERLRRWRQAALVLNASRRFRYTL 333
+D+EAG A T SD +++ D +DPFDI TK+ASVE LRRWRQAALVLNASRRFRYTL
Sbjct: 19 DDMEAGSAKTEEHSDHEELQHDPDDPFDIDNTKNASVESLRRWRQAALVLNASRRFRYTL 78
Query: 334 DLKKEEEKKHILRKIRAHAQAIRAAYLFKAA 426
DL KEE + R IRAHAQ IRAA LFK A
Sbjct: 79 DLNKEEHYDNRRRMIRAHAQVIRAALLFKLA 109
>dbj|BAC56802.1| putative Calcium-transporting ATPase 8, plasma membrane-type [Oryza
sativa (japonica cultivar-group)]
gi|28411839|dbj|BAC57314.1| putative
Calcium-transporting ATPase 8, plasma membrane-type
[Oryza sativa (japonica cultivar-group)]
Length = 1082
Score = 103 bits (257), Expect = 8e-22
Identities = 56/76 (73%), Positives = 62/76 (80%), Gaps = 3/76 (3%)
Frame = +1
Query: 208 DDVDVNDPFDIART---KHASVERLRRWRQAALVLNASRRFRYTLDLKKEEEKKHILRKI 378
+D DV + FD A K+AS +RLRRWRQAALVLNASRRFRYTLDLKKEEEK+ I RKI
Sbjct: 22 EDTDVEEKFDDAFDIPHKNASHDRLRRWRQAALVLNASRRFRYTLDLKKEEEKEMIRRKI 81
Query: 379 RAHAQAIRAAYLFKAA 426
RAHAQ IRAA+LFK A
Sbjct: 82 RAHAQVIRAAFLFKEA 97
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 396,043,659
Number of Sequences: 1393205
Number of extensions: 8362896
Number of successful extensions: 39149
Number of sequences better than 10.0: 146
Number of HSP's better than 10.0 without gapping: 34273
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 38674
length of database: 448,689,247
effective HSP length: 112
effective length of database: 292,650,287
effective search space used: 11706011480
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
