Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC017426A_C01 KMC017426A_c01
(505 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||T06388 alpha-galactosidase (EC 3.2.1.22) - soybean gi|92757... 89 4e-17
sp|P14749|AGAL_CYATE ALPHA-GALACTOSIDASE PRECURSOR (MELIBIASE) (... 88 6e-17
pir||T10860 alpha-galactosidase (EC 3.2.1.22) - kidney bean gi|9... 83 2e-15
gb|AAF04591.1|AF191823_1 alpha-galactosidase [Lycopersicon escul... 73 2e-12
dbj|BAC66445.1| alpha-galactosidase [Helianthus annuus] 70 1e-11
>pir||T06388 alpha-galactosidase (EC 3.2.1.22) - soybean
gi|927575|gb|AAA73963.1| alpha galactosidase
Length = 422
Score = 88.6 bits (218), Expect = 4e-17
Identities = 39/47 (82%), Positives = 45/47 (94%)
Frame = -3
Query: 503 WSDIGLESGTSVDARDLWEHSTKSSISGEMSAELDSHACKMYVLTPN 363
WSDIGL+ GTSV+ARDLW HST+SS+SGE+SAELDSHACKMYV+TPN
Sbjct: 376 WSDIGLKPGTSVEARDLWAHSTQSSVSGEISAELDSHACKMYVVTPN 422
>sp|P14749|AGAL_CYATE ALPHA-GALACTOSIDASE PRECURSOR (MELIBIASE) (ALPHA-D-GALACTOSIDE
GALACTOHYDROLASE) gi|99880|pir||S07472
alpha-galactosidase (EC 3.2.1.22) precursor - guar
gi|18292|emb|CAA32772.1| alpha-galactosidase
preproprotein [Cyamopsis tetragonoloba]
Length = 411
Score = 87.8 bits (216), Expect = 6e-17
Identities = 38/46 (82%), Positives = 44/46 (95%)
Frame = -3
Query: 503 WSDIGLESGTSVDARDLWEHSTKSSISGEMSAELDSHACKMYVLTP 366
WSDIGL+ GT+VDARDLWEHST+S +SGE+SAE+DSHACKMYVLTP
Sbjct: 364 WSDIGLQQGTTVDARDLWEHSTQSLVSGEISAEIDSHACKMYVLTP 409
>pir||T10860 alpha-galactosidase (EC 3.2.1.22) - kidney bean
gi|927577|gb|AAA73964.1| alpha-galactosidase
Length = 425
Score = 82.8 bits (203), Expect = 2e-15
Identities = 37/45 (82%), Positives = 42/45 (93%)
Frame = -3
Query: 503 WSDIGLESGTSVDARDLWEHSTKSSISGEMSAELDSHACKMYVLT 369
WSDIGL+ GT VDARDLW+HST+SS+SGE+SAELDSHAC MYVLT
Sbjct: 379 WSDIGLKPGTLVDARDLWKHSTQSSVSGEISAELDSHACNMYVLT 423
>gb|AAF04591.1|AF191823_1 alpha-galactosidase [Lycopersicon esculentum]
Length = 409
Score = 73.2 bits (178), Expect = 2e-12
Identities = 31/46 (67%), Positives = 37/46 (80%)
Frame = -3
Query: 503 WSDIGLESGTSVDARDLWEHSTKSSISGEMSAELDSHACKMYVLTP 366
WSDIGL+ T VDARDLW HSTK S+ G++SA ++SH C MYVLTP
Sbjct: 362 WSDIGLDYSTLVDARDLWAHSTKGSVKGQLSASVESHDCSMYVLTP 407
>dbj|BAC66445.1| alpha-galactosidase [Helianthus annuus]
Length = 428
Score = 70.1 bits (170), Expect = 1e-11
Identities = 30/46 (65%), Positives = 37/46 (80%)
Frame = -3
Query: 503 WSDIGLESGTSVDARDLWEHSTKSSISGEMSAELDSHACKMYVLTP 366
WSDIGL S T V+ RDLW H T+ S+ G++SA ++SHACKMYVLTP
Sbjct: 382 WSDIGLNSTTVVNVRDLWAHRTQRSVKGQISATVESHACKMYVLTP 427
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 367,238,844
Number of Sequences: 1393205
Number of extensions: 6982127
Number of successful extensions: 15797
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 15470
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15784
length of database: 448,689,247
effective HSP length: 114
effective length of database: 289,863,877
effective search space used: 15362785481
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
