Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC017397A_C01 KMC017397A_c01
(702 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAC86995.1| ATP citrate lyase a-subunit [Lupinus albus] 415 e-121
ref|NP_187317.1| ATP citrate lyase, putative; protein id: At3g06... 412 e-121
dbj|BAB60936.1| putative ATP citrate lyase [Oryza sativa (japoni... 405 e-118
ref|NP_199757.1| ATP citrate lyase; protein id: At5g49460.1, sup... 404 e-118
gb|AAK13318.1|AF290958_1 ATP:citrate lyase [Capsicum annuum] 388 e-113
>emb|CAC86995.1| ATP citrate lyase a-subunit [Lupinus albus]
Length = 608
Score = 415 bits (1066), Expect(2) = e-121
Identities = 205/215 (95%), Positives = 212/215 (98%)
Frame = +1
Query: 58 VLGELGGRDEYSLVEALKQGKVTKPVVAWVSGTCARLFKSEVQFGHAGAKSGGEMESAQA 237
VLGELGGRDEYSLVEALKQGKVTKPVVAWVSGTCARLFKSEVQFGHAGAKSGGE+ESAQA
Sbjct: 228 VLGELGGRDEYSLVEALKQGKVTKPVVAWVSGTCARLFKSEVQFGHAGAKSGGELESAQA 287
Query: 238 KNQALKDAGAAVPTSFEAFEAAIKETFDKLVEEGKVTPVKEITPPPIPEDLSTAIKSGKV 417
KNQAL++AGAAVPTS+EA EAAIKETFDKLVEEGK+T VKE TPPPIPEDL+TAIKSGKV
Sbjct: 288 KNQALQEAGAAVPTSYEALEAAIKETFDKLVEEGKITSVKEFTPPPIPEDLNTAIKSGKV 347
Query: 418 RAPTHIISTISDDRGEEPCYAGVPMSSIIEKGYGVGDVISLLWFKRSLPRYCTQFIEICI 597
RAPTHIISTISDDRGEEPCYAGVPMSSIIEKG+GVGDVISLLWFKRSLPRYCTQFIEICI
Sbjct: 348 RAPTHIISTISDDRGEEPCYAGVPMSSIIEKGFGVGDVISLLWFKRSLPRYCTQFIEICI 407
Query: 598 MLCADHGPCVSGAHNTIVTARAGKDLVSSLVSGLL 702
MLCADHGPCVSGAHNTIVTARAGKDLVSSLVSGLL
Sbjct: 408 MLCADHGPCVSGAHNTIVTARAGKDLVSSLVSGLL 442
Score = 44.3 bits (103), Expect(2) = e-121
Identities = 21/26 (80%), Positives = 22/26 (83%)
Frame = +2
Query: 2 TLSDHVLRFNNIPQIKMIVYLENLVG 79
TLSDHVLRFNNIPQ+KMIV L L G
Sbjct: 209 TLSDHVLRFNNIPQVKMIVVLGELGG 234
>ref|NP_187317.1| ATP citrate lyase, putative; protein id: At3g06650.1, supported by
cDNA: gi_15292848 [Arabidopsis thaliana]
gi|12321918|gb|AAG50997.1|AC036106_10 ATP citrate lyase,
putative; 38389-41775 [Arabidopsis thaliana]
gi|12322674|gb|AAG51326.1|AC020580_6 ATP citrate lyase,
putative; 3734-7120 [Arabidopsis thaliana]
gi|27754223|gb|AAO22565.1| putative ATP citrate lyase
[Arabidopsis thaliana]
Length = 608
Score = 412 bits (1060), Expect(2) = e-121
Identities = 203/215 (94%), Positives = 211/215 (97%)
Frame = +1
Query: 58 VLGELGGRDEYSLVEALKQGKVTKPVVAWVSGTCARLFKSEVQFGHAGAKSGGEMESAQA 237
VLGELGGRDEYSLVEA+KQGKVTKPVVAWVSGTCARLFKSEVQFGHAGAKSGGEMESAQA
Sbjct: 228 VLGELGGRDEYSLVEAMKQGKVTKPVVAWVSGTCARLFKSEVQFGHAGAKSGGEMESAQA 287
Query: 238 KNQALKDAGAAVPTSFEAFEAAIKETFDKLVEEGKVTPVKEITPPPIPEDLSTAIKSGKV 417
KNQAL+DAGA VPTSFEA E AIKETFDKLVEEGKV+P+KE+TPP IPEDLS+AIKSGKV
Sbjct: 288 KNQALQDAGATVPTSFEALEVAIKETFDKLVEEGKVSPIKEVTPPQIPEDLSSAIKSGKV 347
Query: 418 RAPTHIISTISDDRGEEPCYAGVPMSSIIEKGYGVGDVISLLWFKRSLPRYCTQFIEICI 597
RAPTHIISTISDDRGEEPCYAGVPMSSIIE+GYGVGDVISLLWFKRSLPRYCT+FIEICI
Sbjct: 348 RAPTHIISTISDDRGEEPCYAGVPMSSIIEQGYGVGDVISLLWFKRSLPRYCTKFIEICI 407
Query: 598 MLCADHGPCVSGAHNTIVTARAGKDLVSSLVSGLL 702
MLCADHGPCVSGAHNTIVTARAGKDLVSSLVSGLL
Sbjct: 408 MLCADHGPCVSGAHNTIVTARAGKDLVSSLVSGLL 442
Score = 43.9 bits (102), Expect(2) = e-121
Identities = 20/26 (76%), Positives = 22/26 (83%)
Frame = +2
Query: 2 TLSDHVLRFNNIPQIKMIVYLENLVG 79
TLSDH+LRFNNIPQIKM+V L L G
Sbjct: 209 TLSDHILRFNNIPQIKMVVVLGELGG 234
>dbj|BAB60936.1| putative ATP citrate lyase [Oryza sativa (japonica cultivar-group)]
gi|15623805|dbj|BAB67865.1| putative ATP citrate lyase
[Oryza sativa (japonica cultivar-group)]
Length = 608
Score = 405 bits (1041), Expect(2) = e-118
Identities = 198/215 (92%), Positives = 209/215 (97%)
Frame = +1
Query: 58 VLGELGGRDEYSLVEALKQGKVTKPVVAWVSGTCARLFKSEVQFGHAGAKSGGEMESAQA 237
VLGELGG+DEYSLVEALKQGKV KPVVAWVSGTCARLFKSEVQFGHAGAKSGGE+ESAQA
Sbjct: 228 VLGELGGKDEYSLVEALKQGKVQKPVVAWVSGTCARLFKSEVQFGHAGAKSGGELESAQA 287
Query: 238 KNQALKDAGAAVPTSFEAFEAAIKETFDKLVEEGKVTPVKEITPPPIPEDLSTAIKSGKV 417
KNQALKDAGA VPTS+EA E AIKETF+KLVE+GK++PV EITPPPIPEDL TAIKSGKV
Sbjct: 288 KNQALKDAGAVVPTSYEALETAIKETFEKLVEDGKISPVTEITPPPIPEDLKTAIKSGKV 347
Query: 418 RAPTHIISTISDDRGEEPCYAGVPMSSIIEKGYGVGDVISLLWFKRSLPRYCTQFIEICI 597
RAPTHIISTISDDRGEEPCYAGVPMS+IIE+GYGVGDVISLLWFKRSLPRYCTQFIE+CI
Sbjct: 348 RAPTHIISTISDDRGEEPCYAGVPMSTIIEQGYGVGDVISLLWFKRSLPRYCTQFIEMCI 407
Query: 598 MLCADHGPCVSGAHNTIVTARAGKDLVSSLVSGLL 702
MLCADHGPCVSGAHN+IVTARAGKDLVSSLVSGLL
Sbjct: 408 MLCADHGPCVSGAHNSIVTARAGKDLVSSLVSGLL 442
Score = 42.7 bits (99), Expect(2) = e-118
Identities = 19/26 (73%), Positives = 22/26 (84%)
Frame = +2
Query: 2 TLSDHVLRFNNIPQIKMIVYLENLVG 79
TLSDH+LRFNNIPQ+KM+V L L G
Sbjct: 209 TLSDHILRFNNIPQVKMMVVLGELGG 234
>ref|NP_199757.1| ATP citrate lyase; protein id: At5g49460.1, supported by cDNA:
gi_14334787, supported by cDNA: gi_16648643, supported
by cDNA: gi_17065615 [Arabidopsis thaliana]
gi|9759429|dbj|BAB09916.1| ATP citrate lyase
[Arabidopsis thaliana] gi|14334788|gb|AAK59572.1|
putative ATP citrate lyase [Arabidopsis thaliana]
gi|16648644|gb|AAL25638.1| ATP-citrate lyase subunit B
[Arabidopsis thaliana] gi|17065616|gb|AAL33788.1|
putative ATP citrate lyase [Arabidopsis thaliana]
Length = 608
Score = 404 bits (1037), Expect(2) = e-118
Identities = 199/215 (92%), Positives = 209/215 (96%)
Frame = +1
Query: 58 VLGELGGRDEYSLVEALKQGKVTKPVVAWVSGTCARLFKSEVQFGHAGAKSGGEMESAQA 237
VLGELGGRDEYSLVEALK+GKV KPVVAWVSGTCARLFKSEVQFGHAGAKSGGEMESAQA
Sbjct: 228 VLGELGGRDEYSLVEALKEGKVNKPVVAWVSGTCARLFKSEVQFGHAGAKSGGEMESAQA 287
Query: 238 KNQALKDAGAAVPTSFEAFEAAIKETFDKLVEEGKVTPVKEITPPPIPEDLSTAIKSGKV 417
KNQAL DAGA VPTSFEA E+AIKETF+KLVEEGKV+P+KE+ PP IPEDL++AIKSGKV
Sbjct: 288 KNQALIDAGAIVPTSFEALESAIKETFEKLVEEGKVSPIKEVIPPQIPEDLNSAIKSGKV 347
Query: 418 RAPTHIISTISDDRGEEPCYAGVPMSSIIEKGYGVGDVISLLWFKRSLPRYCTQFIEICI 597
RAPTHIISTISDDRGEEPCYAGVPMSSIIE+GYGVGDVISLLWFKRSLPRYCT+FIEICI
Sbjct: 348 RAPTHIISTISDDRGEEPCYAGVPMSSIIEQGYGVGDVISLLWFKRSLPRYCTKFIEICI 407
Query: 598 MLCADHGPCVSGAHNTIVTARAGKDLVSSLVSGLL 702
MLCADHGPCVSGAHNTIVTARAGKDLVSSLVSGLL
Sbjct: 408 MLCADHGPCVSGAHNTIVTARAGKDLVSSLVSGLL 442
Score = 43.1 bits (100), Expect(2) = e-118
Identities = 20/26 (76%), Positives = 22/26 (83%)
Frame = +2
Query: 2 TLSDHVLRFNNIPQIKMIVYLENLVG 79
TLSDH+LRFNNIPQIKM+V L L G
Sbjct: 209 TLSDHILRFNNIPQIKMMVVLGELGG 234
>gb|AAK13318.1|AF290958_1 ATP:citrate lyase [Capsicum annuum]
Length = 608
Score = 388 bits (996), Expect(2) = e-113
Identities = 190/215 (88%), Positives = 201/215 (93%)
Frame = +1
Query: 58 VLGELGGRDEYSLVEALKQGKVTKPVVAWVSGTCARLFKSEVQFGHAGAKSGGEMESAQA 237
VLGELGGRDEYSLVEALKQGK+ KPVVAWVSGTCA LFKSEVQFGHAGAKSGGEMESAQA
Sbjct: 228 VLGELGGRDEYSLVEALKQGKINKPVVAWVSGTCATLFKSEVQFGHAGAKSGGEMESAQA 287
Query: 238 KNQALKDAGAAVPTSFEAFEAAIKETFDKLVEEGKVTPVKEITPPPIPEDLSTAIKSGKV 417
KNQAL+DAGA VPTS+EAFE AIK F+ LV EGK TPVKEITPP IPEDL+TAIKSGKV
Sbjct: 288 KNQALRDAGAVVPTSYEAFEGAIKAAFENLVSEGKTTPVKEITPPNIPEDLNTAIKSGKV 347
Query: 418 RAPTHIISTISDDRGEEPCYAGVPMSSIIEKGYGVGDVISLLWFKRSLPRYCTQFIEICI 597
RAPTHIISTISDDRGEEPCY GVPMSSI+E+G VGDVISLLWFKRSLPRYCT+FIEIC+
Sbjct: 348 RAPTHIISTISDDRGEEPCYGGVPMSSIVEQGLCVGDVISLLWFKRSLPRYCTRFIEICV 407
Query: 598 MLCADHGPCVSGAHNTIVTARAGKDLVSSLVSGLL 702
+LCADHGPCVSGAHN+IVTARAGKDLVS LVSGLL
Sbjct: 408 LLCADHGPCVSGAHNSIVTARAGKDLVSCLVSGLL 442
Score = 44.3 bits (103), Expect(2) = e-113
Identities = 21/26 (80%), Positives = 22/26 (83%)
Frame = +2
Query: 2 TLSDHVLRFNNIPQIKMIVYLENLVG 79
TLSDHVLRFNNIPQ+KMIV L L G
Sbjct: 209 TLSDHVLRFNNIPQVKMIVVLGELGG 234
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 616,930,533
Number of Sequences: 1393205
Number of extensions: 13189212
Number of successful extensions: 39033
Number of sequences better than 10.0: 215
Number of HSP's better than 10.0 without gapping: 37273
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 38917
length of database: 448,689,247
effective HSP length: 119
effective length of database: 282,897,852
effective search space used: 32250355128
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
