KMC017391A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KMC017391A_C01 KMC017391A_c01
ACATTCTAAAAAAGAAATGTGCATTACTATAATATAATAAAATAAAAAATTTAATCGATA
CAAAGTCTTGTTATTAAACAACTCCTTTTAGATCTCACACCTCAATTGGGCCTGAGGTAC
TGCAACTAGCACCAAATTCAAAAACTCACAAATAGTTTAAGGCTTAACCCTCAATCTTTT
AAGATCATCAATCAATGCAGTCAAATTCTTGTGGGAGGAGCCACCTTCTTCAACAGCCTG
CCTAGCCTTTTCCCCATACTCTTGTGCGCGCCGTCTGATCTGCTCCCCCTCATCACCACC
GTCCATCAACCTCCTCACAGCCTTCTCTATACTCTCCCTGCTCACCAATTTCTCCCTCTT
ATCAAAACCCATCAGGCAACACTCCTCTGCACCCACCTCCACCCCAATCCCCCGCACCTC
AGTAATCAGCTTCTCATTGTAAAATTGCTCCCCAACCACCGGCCACGTTATCATCGGAAC
CCCCGCGCTAACCGCCTCAACTGTCGAGTTCCACCCACAATGGGTCACAAACGCACCCAC
AGCACGGTGGCCTAGTATAACCACCTGCGGAACCCAACCTCTGATAATCATCCCCTTCTC
TCG


Nr search

BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KMC017391A_C01 KMC017391A_c01
         (603 letters)

Database: nr 
           1,393,205 sequences; 448,689,247 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

dbj|BAA36410.1| UDP-glycose:flavonoid glycosyltransferase [Vigna...   184  6e-46
emb|CAB88666.1| putative UDP-glycose [Cicer arietinum]                172  4e-42
dbj|BAB17059.1| putative glucosyl transferase [Oryza sativa (jap...   166  2e-40
ref|NP_179151.1| putative glucosyltransferase; protein id: At2g1...   165  4e-40
ref|NP_181216.1| putative glucosyl transferase; protein id: At2g...   161  5e-39

>dbj|BAA36410.1| UDP-glycose:flavonoid glycosyltransferase [Vigna mungo]
          Length = 477

 Score =  184 bits (468), Expect = 6e-46
 Identities = 87/143 (60%), Positives = 115/143 (79%)
 Frame = -1

Query: 600 EKGMIIRGWVPQVVILGHRAVGAFVTHCGWNSTVEAVSAGVPMITWPVVGEQFYNEKLIT 421
           ++GM+I+GW PQ +IL H AVG F+THCGWN+ VEA+SAGVPM+T P   +Q++NEKLIT
Sbjct: 330 KRGMLIKGWAPQPLILNHPAVGGFLTHCGWNAVVEAISAGVPMVTMPGFSDQYFNEKLIT 389

Query: 420 EVRGIGVEVGAEECCLMGFDKREKLVSRESIEKAVRRLMDGGDEGEQIRRRAQEYGEKAR 241
           EV G GVEVGA E  +  ++ ++ ++S E IEKAV+RLMD G+EGE+IR++A+E  +KA 
Sbjct: 390 EVHGFGVEVGAAEWSISPYEGKKTVLSGERIEKAVKRLMDKGNEGEKIRKKAKEMQDKAW 449

Query: 240 QAVEEGGSSHKNLTALIDDLKRL 172
           +AV+EGGSSH NLTALID LK L
Sbjct: 450 RAVQEGGSSHNNLTALIDHLKAL 472

>emb|CAB88666.1| putative UDP-glycose [Cicer arietinum]
          Length = 438

 Score =  172 bits (435), Expect = 4e-42
 Identities = 82/140 (58%), Positives = 109/140 (77%)
 Frame = -1

Query: 597 KGMIIRGWVPQVVILGHRAVGAFVTHCGWNSTVEAVSAGVPMITWPVVGEQFYNEKLITE 418
           +GM+I+GWVPQ +IL H ++G F+THCGWN+TVEA+S+GVPMIT P  G+Q+YNEKL+TE
Sbjct: 288 RGMLIKGWVPQPLILDHPSIGGFLTHCGWNATVEAISSGVPMITMPGFGDQYYNEKLVTE 347

Query: 417 VRGIGVEVGAEECCLMGFDKREKLVSRESIEKAVRRLMDGGDEGEQIRRRAQEYGEKARQ 238
           V  IGVEVGA E  +  +D ++ +VS E IEK V+ LMDG   G +IR+RA++  EKA +
Sbjct: 348 VHRIGVEVGAAEWSMSPYDAKKTVVSWERIEKGVKSLMDGDGGGNEIRKRAKDMKEKAWK 407

Query: 237 AVEEGGSSHKNLTALIDDLK 178
           AV+EGGSS   LTAL+D L+
Sbjct: 408 AVQEGGSSQNCLTALVDYLQ 427

>dbj|BAB17059.1| putative glucosyl transferase [Oryza sativa (japonica
           cultivar-group)]
          Length = 498

 Score =  166 bits (421), Expect = 2e-40
 Identities = 76/141 (53%), Positives = 107/141 (74%)
 Frame = -1

Query: 603 REKGMIIRGWVPQVVILGHRAVGAFVTHCGWNSTVEAVSAGVPMITWPVVGEQFYNEKLI 424
           +++GMIIRGW PQ++IL H+A+G F+THCGWNST+E +SAGVPMITWP   EQF NEKL+
Sbjct: 350 KDRGMIIRGWAPQMMILWHQAIGGFMTHCGWNSTLEGISAGVPMITWPHCSEQFVNEKLV 409

Query: 423 TEVRGIGVEVGAEECCLMGFDKREKLVSRESIEKAVRRLMDGGDEGEQIRRRAQEYGEKA 244
            +   IGVEVG +     G +++E  V+R ++E AV  LMD G+  ++IR RA+++G KA
Sbjct: 410 VDHLKIGVEVGVKGVTQWGTEQKEVKVTRTAVETAVSMLMDEGEVAQEIRMRAKDFGMKA 469

Query: 243 RQAVEEGGSSHKNLTALIDDL 181
           R+A+EEGGSS+ N+  LI ++
Sbjct: 470 RRALEEGGSSYNNIKLLIQEM 490

>ref|NP_179151.1| putative glucosyltransferase; protein id: At2g15490.1 [Arabidopsis
           thaliana] gi|25286797|pir||F84529 probable
           glucosyltransferase [imported] - Arabidopsis thaliana
           gi|4335715|gb|AAD17393.1| putative glucosyltransferase
           [Arabidopsis thaliana]
          Length = 460

 Score =  165 bits (418), Expect = 4e-40
 Identities = 79/139 (56%), Positives = 107/139 (76%)
 Frame = -1

Query: 597 KGMIIRGWVPQVVILGHRAVGAFVTHCGWNSTVEAVSAGVPMITWPVVGEQFYNEKLITE 418
           KG+IIRGW PQV+IL H+A+G FVTHCGWNST+E ++AG+PM+TWP+  EQFYNEKL+T+
Sbjct: 324 KGLIIRGWAPQVLILDHKAIGGFVTHCGWNSTLEGIAAGLPMVTWPMGAEQFYNEKLLTK 383

Query: 417 VRGIGVEVGAEECCLMGFDKREKLVSRESIEKAVRRLMDGGDEGEQIRRRAQEYGEKARQ 238
           V  IGV VGA E       K+ KL+SR  +EKAVR ++ GG++ E+ R RA+E GE A+ 
Sbjct: 384 VLRIGVNVGATELV-----KKGKLISRAQVEKAVREVI-GGEKAEERRLRAKELGEMAKA 437

Query: 237 AVEEGGSSHKNLTALIDDL 181
           AVEEGGSS+ ++   +++L
Sbjct: 438 AVEEGGSSYNDVNKFMEEL 456

>ref|NP_181216.1| putative glucosyl transferase; protein id: At2g36780.1, supported
           by cDNA: gi_15028388, supported by cDNA: gi_19310660
           [Arabidopsis thaliana] gi|25286792|pir||F84784 probable
           glucosyl transferase [imported] - Arabidopsis thaliana
           gi|4415923|gb|AAD20154.1| putative glucosyl transferase
           [Arabidopsis thaliana] gi|15028389|gb|AAK76671.1|
           putative glucosyl transferase [Arabidopsis thaliana]
           gi|19310661|gb|AAL85061.1| putative glucosyl transferase
           [Arabidopsis thaliana]
          Length = 496

 Score =  161 bits (408), Expect = 5e-39
 Identities = 73/145 (50%), Positives = 105/145 (72%), Gaps = 1/145 (0%)
 Frame = -1

Query: 603 REKGMIIRGWVPQVVILGHRAVGAFVTHCGWNSTVEAVSAGVPMITWPVVGEQFYNEKLI 424
           +E+G++I+GW PQV+IL H +VG F+THCGWNST+E +++G+P+ITWP+ G+QF N+KL+
Sbjct: 347 KERGLLIKGWAPQVLILSHPSVGGFLTHCGWNSTLEGITSGIPLITWPLFGDQFCNQKLV 406

Query: 423 TEVRGIGVEVGAEECCLMG-FDKREKLVSRESIEKAVRRLMDGGDEGEQIRRRAQEYGEK 247
            +V   GV  G EE    G  DK   LV +E ++KAV  LM   D+ ++ RRR +E GE 
Sbjct: 407 VQVLKAGVSAGVEEVMKWGEEDKIGVLVDKEGVKKAVEELMGDSDDAKERRRRVKELGEL 466

Query: 246 ARQAVEEGGSSHKNLTALIDDLKRL 172
           A +AVE+GGSSH N+T L+ D+ +L
Sbjct: 467 AHKAVEKGGSSHSNITLLLQDIMQL 491

  Database: nr
    Posted date:  Apr 1, 2003  2:05 AM
  Number of letters in database: 448,689,247
  Number of sequences in database:  1,393,205
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 584,407,271
Number of Sequences: 1393205
Number of extensions: 15245422
Number of successful extensions: 104876
Number of sequences better than 10.0: 2849
Number of HSP's better than 10.0 without gapping: 63605
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 86577
length of database: 448,689,247
effective HSP length: 117
effective length of database: 285,684,262
effective search space used: 23711793746
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)


EST assemble image


clone accession position
1 MF086b05_f BP032811 1 457
2 SPD010b03_f BP044765 1 480
3 SPD062b10_f BP048919 1 492
4 MF023h08_f BP029506 53 532
5 MFB056f10_f BP038075 53 605
6 MF077h09_f BP032401 57 528
7 SPD037e12_f BP046953 95 184




Lotus japonicus
Kazusa DNA Research Institute