Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC017362A_C01 KMC017362A_c01
(551 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_176059.1| nodule-specific protein, putative; protein id: ... 189 1e-47
ref|NP_172410.1| putative lipase; protein id: At1g09390.1 [Arabi... 185 3e-46
dbj|BAB55786.1| putative lipase homolog [Oryza sativa (japonica ... 159 2e-38
dbj|BAB39241.1| putative lipase homolog [Oryza sativa (japonica ... 155 3e-37
pir||T52366 lipase-like protein Lip-4 [imported] - Arabidopsis t... 152 2e-36
>ref|NP_176059.1| nodule-specific protein, putative; protein id: At1g56670.1
[Arabidopsis thaliana] gi|25404142|pir||D96608
hypothetical protein F25P12.90 [imported] - Arabidopsis
thaliana gi|9954747|gb|AAG09098.1|AC009323_9 Similar to
nodulins [Arabidopsis thaliana]
Length = 373
Score = 189 bits (481), Expect = 1e-47
Identities = 79/139 (56%), Positives = 106/139 (75%)
Frame = -1
Query: 551 LAQKKDLDLFGCLSSYNSAARLFNEALYHSSQKLRTRLKDATLVYVDIYAIKHDLMANAT 372
+ + KDLD GCL SYNSAA LFN+ L H ++LRT L+DAT++Y+DIYAIK+ L+AN+
Sbjct: 235 MVKSKDLDQHGCLVSYNSAATLFNQGLDHMCEELRTELRDATIIYIDIYAIKYSLIANSN 294
Query: 371 KYGFSNPWTVCCGFGGPPYNFDLRVTCGQPGYQVCDEGSRYVNWDGTHHTEAANTFIASK 192
+YGF +P CCG+GG PYN+++++TCG G VC+EGSR+++WDG H+TE AN +A K
Sbjct: 295 QYGFKSPLMACCGYGGTPYNYNVKITCGHKGSNVCEEGSRFISWDGIHYTETANAIVAMK 354
Query: 191 ILSTDYSTPRTPFEFFCHR 135
+LS YS P TPF FFC R
Sbjct: 355 VLSMHYSKPPTPFHFFCRR 373
>ref|NP_172410.1| putative lipase; protein id: At1g09390.1 [Arabidopsis thaliana]
gi|25336317|pir||B86227 hypothetical protein [imported]
- Arabidopsis thaliana gi|3482914|gb|AAC33199.1| Similar
to nodulins and lipase [Arabidopsis thaliana]
gi|27754509|gb|AAO22702.1| putative lipase [Arabidopsis
thaliana] gi|28393967|gb|AAO42391.1| putative lipase
[Arabidopsis thaliana]
Length = 370
Score = 185 bits (470), Expect = 3e-46
Identities = 78/137 (56%), Positives = 102/137 (73%)
Frame = -1
Query: 551 LAQKKDLDLFGCLSSYNSAARLFNEALYHSSQKLRTRLKDATLVYVDIYAIKHDLMANAT 372
+ K D GCL++YN+AA+LFNE L H + LRT LK+A +VYVDIYAIK+DL+AN+
Sbjct: 232 MVHSKGFDKHGCLATYNAAAKLFNEGLDHMCRDLRTELKEANIVYVDIYAIKYDLIANSN 291
Query: 371 KYGFSNPWTVCCGFGGPPYNFDLRVTCGQPGYQVCDEGSRYVNWDGTHHTEAANTFIASK 192
YGF P CCG+GGPPYN+++ +TCG G + CDEGSR+++WDG H+TE AN +A K
Sbjct: 292 NYGFEKPLMACCGYGGPPYNYNVNITCGNGGSKSCDEGSRFISWDGIHYTETANAIVAMK 351
Query: 191 ILSTDYSTPRTPFEFFC 141
+LS +STP TPF FFC
Sbjct: 352 VLSMQHSTPPTPFHFFC 368
>dbj|BAB55786.1| putative lipase homolog [Oryza sativa (japonica cultivar-group)]
Length = 384
Score = 159 bits (403), Expect = 2e-38
Identities = 70/136 (51%), Positives = 94/136 (68%)
Frame = -1
Query: 548 AQKKDLDLFGCLSSYNSAARLFNEALYHSSQKLRTRLKDATLVYVDIYAIKHDLMANATK 369
A DLD GCL + N+ A FN L +L ++L+ AT+V+ DI AIK+DL+AN +
Sbjct: 247 ADDGDLDPSGCLKTLNAGAYEFNSQLSSICDQLSSQLRGATIVFTDILAIKYDLIANHSS 306
Query: 368 YGFSNPWTVCCGFGGPPYNFDLRVTCGQPGYQVCDEGSRYVNWDGTHHTEAANTFIASKI 189
YGF P CCG GGPPYN+D V+C GY+VC++GS++V+WDG H+T+AAN +A KI
Sbjct: 307 YGFEEPLMACCGHGGPPYNYDFNVSCLGAGYRVCEDGSKFVSWDGVHYTDAANAVVAGKI 366
Query: 188 LSTDYSTPRTPFEFFC 141
LS DYS P+ PF +FC
Sbjct: 367 LSADYSRPKLPFSYFC 382
>dbj|BAB39241.1| putative lipase homolog [Oryza sativa (japonica cultivar-group)]
gi|14164526|dbj|BAB55775.1| putative lipase homolog
[Oryza sativa (japonica cultivar-group)]
Length = 284
Score = 155 bits (392), Expect = 3e-37
Identities = 70/132 (53%), Positives = 93/132 (70%)
Frame = -1
Query: 536 DLDLFGCLSSYNSAARLFNEALYHSSQKLRTRLKDATLVYVDIYAIKHDLMANATKYGFS 357
DLD GCL +YN AA FN AL +L T++KDAT+VY D++ +K+DL+AN TKYGF
Sbjct: 152 DLDSNGCLKTYNRAAVTFNAALGSLCDQLSTQMKDATIVYTDLFPLKYDLIANRTKYGFD 211
Query: 356 NPWTVCCGFGGPPYNFDLRVTCGQPGYQVCDEGSRYVNWDGTHHTEAANTFIASKILSTD 177
P CCG+GGPPYN+++ + C Q CD+GS++V+WDG H TEAAN +A ILS+D
Sbjct: 212 KPLMTCCGYGGPPYNYNITIGC-QDKNASCDDGSKFVSWDGVHLTEAANAIVAKGILSSD 270
Query: 176 YSTPRTPFEFFC 141
YS P+ F+ FC
Sbjct: 271 YSRPKIKFDQFC 282
>pir||T52366 lipase-like protein Lip-4 [imported] - Arabidopsis thaliana
(fragment) gi|3220021|gb|AAC23651.1| lipase homolog
[Arabidopsis thaliana]
Length = 301
Score = 152 bits (385), Expect = 2e-36
Identities = 62/110 (56%), Positives = 86/110 (77%)
Frame = -1
Query: 551 LAQKKDLDLFGCLSSYNSAARLFNEALYHSSQKLRTRLKDATLVYVDIYAIKHDLMANAT 372
+ + KDLD GCL SYNSAA LFN+ L H ++LRT L+DAT++Y+DIYAIK+ L+AN+
Sbjct: 191 MVKSKDLDQLGCLVSYNSAATLFNQGLDHMCEELRTELRDATIIYIDIYAIKYSLIANSN 250
Query: 371 KYGFSNPWTVCCGFGGPPYNFDLRVTCGQPGYQVCDEGSRYVNWDGTHHT 222
+YGF +P CCG+GG PYN+++++TCG G VC EGSR+++WDG H+T
Sbjct: 251 QYGFKSPLMACCGYGGTPYNYNVKITCGHKGSNVCKEGSRFISWDGIHYT 300
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 489,659,222
Number of Sequences: 1393205
Number of extensions: 10809106
Number of successful extensions: 25696
Number of sequences better than 10.0: 226
Number of HSP's better than 10.0 without gapping: 24937
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25555
length of database: 448,689,247
effective HSP length: 116
effective length of database: 287,077,467
effective search space used: 19234190289
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
