Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC017360A_C01 KMC017360A_c01
(642 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAB82451.1| PBng110 [Vigna radiata] 121 9e-27
ref|NP_201110.1| unknown protein; protein id: At5g63050.1 [Arabi... 108 5e-23
ref|NP_473166.2| hypothetical protein, conserved [Plasmodium fal... 33 3.2
gb|AAL92702.1|AC115685_6 hypothetical protein [Dictyostelium dis... 33 4.2
gb|AAF99465.1| PV1H14095_P [Plasmodium vivax] 32 9.4
>dbj|BAB82451.1| PBng110 [Vigna radiata]
Length = 198
Score = 121 bits (303), Expect = 9e-27
Identities = 54/72 (75%), Positives = 63/72 (87%)
Frame = -1
Query: 642 FSYVFYGKLKEDIKVHFLQPILNIKNMDYKELARKKLKELAEWIREKYLDYVESIWPYYC 463
+SY+F GKLKEDI + LQPIL+ KN DY++L RKKLKEL +W+ E+YLDYVESIWPYYC
Sbjct: 127 YSYIFRGKLKEDISTNVLQPILSAKNRDYRQLTRKKLKELQDWVLERYLDYVESIWPYYC 186
Query: 462 RTIRFLKRANLI 427
RTIRFLKRANLI
Sbjct: 187 RTIRFLKRANLI 198
>ref|NP_201110.1| unknown protein; protein id: At5g63050.1 [Arabidopsis thaliana]
gi|10177286|dbj|BAB10547.1| gene_id:MDC12.1~unknown
protein [Arabidopsis thaliana]
Length = 216
Score = 108 bits (271), Expect = 5e-23
Identities = 48/72 (66%), Positives = 58/72 (79%)
Frame = -1
Query: 642 FSYVFYGKLKEDIKVHFLQPILNIKNMDYKELARKKLKELAEWIREKYLDYVESIWPYYC 463
+ Y+ GKLK+D+K +P++ IKN DYKEL R KLK+ EWI EKYLD+VES+WPYYC
Sbjct: 145 YQYIADGKLKDDVKALVFKPVVAIKNTDYKELTRTKLKQFQEWIIEKYLDFVESVWPYYC 204
Query: 462 RTIRFLKRANLI 427
RTIRFLKRANLI
Sbjct: 205 RTIRFLKRANLI 216
>ref|NP_473166.2| hypothetical protein, conserved [Plasmodium falciparum 3D7]
gi|23477022|emb|CAB38989.3| hypothetical protein,
conserved [Plasmodium falciparum 3D7]
Length = 2226
Score = 33.1 bits (74), Expect = 3.2
Identities = 16/55 (29%), Positives = 30/55 (54%)
Frame = -1
Query: 639 SYVFYGKLKEDIKVHFLQPILNIKNMDYKELARKKLKELAEWIREKYLDYVESIW 475
+Y+FYGK+K+ K F+ +I YK+ + + ++I +KY+D + W
Sbjct: 1045 NYIFYGKVKDTYKEFFIHENKHITPY-YKQNHKPYFNNMYKYIFKKYIDLSTNYW 1098
>gb|AAL92702.1|AC115685_6 hypothetical protein [Dictyostelium discoideum]
gi|28828679|gb|AAO51282.1| hypothetical protein
[Dictyostelium discoideum]
Length = 338
Score = 32.7 bits (73), Expect = 4.2
Identities = 20/46 (43%), Positives = 27/46 (58%)
Frame = -1
Query: 618 LKEDIKVHFLQPILNIKNMDYKELARKKLKELAEWIREKYLDYVES 481
+KE IK + Q IL IK Y ++ K KELAEW YL+ +E+
Sbjct: 27 IKEQIKSEYEQKILKIKKEFY--ISGNKKKELAEW----YLELIEN 66
>gb|AAF99465.1| PV1H14095_P [Plasmodium vivax]
Length = 1956
Score = 31.6 bits (70), Expect = 9.4
Identities = 15/55 (27%), Positives = 30/55 (54%)
Frame = -1
Query: 639 SYVFYGKLKEDIKVHFLQPILNIKNMDYKELARKKLKELAEWIREKYLDYVESIW 475
+Y++YGK+K+ + F+ NI YK+ + + ++I +KY+D + W
Sbjct: 916 NYIYYGKVKDTHREFFIHENRNITPY-YKQTNKFYCTNIFKYIYKKYIDMSTNYW 969
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 536,043,723
Number of Sequences: 1393205
Number of extensions: 11215447
Number of successful extensions: 24730
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 24082
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24726
length of database: 448,689,247
effective HSP length: 118
effective length of database: 284,291,057
effective search space used: 27007650415
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
