Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC017308A_C01 KMC017308A_c01
(494 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAK85402.1| beta-1,3-glucanase [Camellia sinensis] 108 4e-23
ref|NP_565269.1| glycosyl hydrolase family 17 (beta-1,3-glucanas... 82 4e-15
gb|AAN05325.1| Putative beta-1,3-glucanase [Oryza sativa (japoni... 78 5e-14
ref|NP_176799.1| glycosyl hydrolase family 17; protein id: At1g6... 63 2e-09
gb|AAM64809.1| unknown [Arabidopsis thaliana] 63 2e-09
>gb|AAK85402.1| beta-1,3-glucanase [Camellia sinensis]
Length = 350
Score = 108 bits (269), Expect = 4e-23
Identities = 49/68 (72%), Positives = 57/68 (83%)
Frame = -1
Query: 491 AHANYAFDTYYHQMGKSPESCNFNQMATITTSNPSHGSCIFPGSLGQNGTFANVTAPSLN 312
AHA YAFDTYY QMGK+ +C+FN +ATITT+NP+HGSC+FPGS G+NGTF N TAPSLN
Sbjct: 258 AHATYAFDTYYQQMGKASGTCDFNGVATITTTNPTHGSCVFPGSNGKNGTFLNSTAPSLN 317
Query: 311 STSSSSSA 288
STSS A
Sbjct: 318 STSSGCPA 325
>ref|NP_565269.1| glycosyl hydrolase family 17 (beta-1,3-glucanase); protein id:
At2g01630.1, supported by cDNA: 154469. [Arabidopsis
thaliana] gi|20197543|gb|AAD12708.2| putative
beta-1,3-glucanase [Arabidopsis thaliana]
gi|21553631|gb|AAM62724.1| putative beta-1,3-glucanase
[Arabidopsis thaliana]
Length = 501
Score = 81.6 bits (200), Expect = 4e-15
Identities = 44/98 (44%), Positives = 59/98 (59%), Gaps = 8/98 (8%)
Frame = -1
Query: 491 AHANYAFDTYYHQMGKSPESCNFNQMATITTSNPSHGSCIFPGSLGQNGTFANVT---AP 321
AH+ YAF+ YY +MGK+ SC+F +AT+TT++PS G+C+FPGS N T N T AP
Sbjct: 404 AHSTYAFNAYYQKMGKASGSCDFKGVATVTTTDPSRGTCVFPGSAKSNQTLGNNTSALAP 463
Query: 320 SLNSTSSSSSACNLHK-----CDLRIKSLLMVIGFQIL 222
S NST+S H DL + SLL++I L
Sbjct: 464 SANSTTSGCIPKYYHHPHASFGDLTLLSLLLIIALVFL 501
>gb|AAN05325.1| Putative beta-1,3-glucanase [Oryza sativa (japonica
cultivar-group)]
Length = 504
Score = 78.2 bits (191), Expect = 5e-14
Identities = 46/99 (46%), Positives = 62/99 (62%), Gaps = 4/99 (4%)
Frame = -1
Query: 491 AHANYAFDTYYHQMGKSPESCNFNQMATITTSNPSHGSCIFPGSLGQNGT-FANVT--AP 321
AHA YAF+ YYH MG +C F+ +A ITT++PSHGSC++ GS G+NGT N T AP
Sbjct: 408 AHATYAFNAYYHGMGMGSGTCYFSGVAVITTTDPSHGSCVYAGSGGKNGTSLLNGTSLAP 467
Query: 320 SLNSTSSSSSACNLHKCDLRIKSLL-MVIGFQILGVVVL 207
S NST+ S A H+ + S + V+ +L VV+L
Sbjct: 468 SSNSTAGDSGA---HRAIGDVSSFVRAVVAALLLSVVLL 503
>ref|NP_176799.1| glycosyl hydrolase family 17; protein id: At1g66250.1 [Arabidopsis
thaliana] gi|25404601|pir||E96687 hypothetical protein
T6J19.7 [imported] - Arabidopsis thaliana
gi|12323569|gb|AAG51762.1|AC066691_2 beta-1,3-glucanase
precursor, putative; 34016-35272 [Arabidopsis thaliana]
Length = 418
Score = 62.8 bits (151), Expect = 2e-09
Identities = 25/35 (71%), Positives = 32/35 (91%)
Frame = -1
Query: 491 AHANYAFDTYYHQMGKSPESCNFNQMATITTSNPS 387
AHANYAFDTYYHQ G +P++CNFN +A+ITT++PS
Sbjct: 370 AHANYAFDTYYHQTGNNPDACNFNGVASITTTDPS 404
>gb|AAM64809.1| unknown [Arabidopsis thaliana]
Length = 194
Score = 62.8 bits (151), Expect = 2e-09
Identities = 28/68 (41%), Positives = 43/68 (63%), Gaps = 1/68 (1%)
Frame = -1
Query: 491 AHANYAFDTYYHQMGKSPESCNFNQMATITTSNPSHGSCIFPGSL-GQNGTFANVTAPSL 315
AH NYA ++++ + G++ ESCNF AT+TT++PS+ C FP S G +G+ + P
Sbjct: 64 AHCNYAVNSFFQKKGQASESCNFTGTATLTTTDPSYTGCAFPSSASGSSGSGSTTVTPGK 123
Query: 314 NSTSSSSS 291
NS S+S
Sbjct: 124 NSPKGSNS 131
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 420,570,230
Number of Sequences: 1393205
Number of extensions: 8642784
Number of successful extensions: 20061
Number of sequences better than 10.0: 131
Number of HSP's better than 10.0 without gapping: 19183
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20017
length of database: 448,689,247
effective HSP length: 114
effective length of database: 289,863,877
effective search space used: 14493193850
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
