Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC017263A_C01 KMC017263A_c01
(467 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAO24593.1| At5g49570 [Arabidopsis thaliana] 150 5e-36
ref|NP_199768.1| putative protein; protein id: At5g49570.1 [Arab... 150 5e-36
dbj|BAC07039.1| putative PNGase (peptide N-glycanase) [Oryza sat... 115 2e-25
pir||T35669 hypothetical ATP/GTP binding protein - Streptomyces ... 65 3e-10
emb|CAD55244.1| putative secreted ATP/GTP binding protein [Strep... 65 3e-10
>gb|AAO24593.1| At5g49570 [Arabidopsis thaliana]
Length = 721
Score = 150 bits (380), Expect = 5e-36
Identities = 71/98 (72%), Positives = 83/98 (84%)
Frame = -3
Query: 465 YKTFNNNMFELAAYELMSANNAPERDPMDWILEGSNDKGISWQVLDKQTSQFFEDRFQRR 286
YKT N M +L AYELMSAN+APERDP DWILEGSND G +W VLDKQTSQ FE+RFQR+
Sbjct: 620 YKTLYNQMHQLIAYELMSANDAPERDPKDWILEGSNDGGSTWCVLDKQTSQVFEERFQRK 679
Query: 285 TYTINSASFPSNVFRFRFLAVRDINSTSRLQIGSIDLY 172
+Y I + F +N+FRFRFL+VRD+NSTSRLQ+GSIDLY
Sbjct: 680 SYKITTPGFQANLFRFRFLSVRDVNSTSRLQLGSIDLY 717
>ref|NP_199768.1| putative protein; protein id: At5g49570.1 [Arabidopsis thaliana]
gi|10177623|dbj|BAB10770.1| contains similarity to
peptide:N-glycanase~gene_id:K6M13.12 [Arabidopsis
thaliana] gi|22655232|gb|AAM98206.1| unknown protein
[Arabidopsis thaliana] gi|28059472|gb|AAO30061.1|
unknown protein [Arabidopsis thaliana]
Length = 721
Score = 150 bits (380), Expect = 5e-36
Identities = 71/98 (72%), Positives = 83/98 (84%)
Frame = -3
Query: 465 YKTFNNNMFELAAYELMSANNAPERDPMDWILEGSNDKGISWQVLDKQTSQFFEDRFQRR 286
YKT N M +L AYELMSAN+APERDP DWILEGSND G +W VLDKQTSQ FE+RFQR+
Sbjct: 620 YKTLYNQMHQLIAYELMSANDAPERDPKDWILEGSNDGGSTWCVLDKQTSQVFEERFQRK 679
Query: 285 TYTINSASFPSNVFRFRFLAVRDINSTSRLQIGSIDLY 172
+Y I + F +N+FRFRFL+VRD+NSTSRLQ+GSIDLY
Sbjct: 680 SYKITTPGFQANLFRFRFLSVRDVNSTSRLQLGSIDLY 717
>dbj|BAC07039.1| putative PNGase (peptide N-glycanase) [Oryza sativa (japonica
cultivar-group)] gi|22093814|dbj|BAC07101.1| putative
PNGase (peptide N-glycanase) [Oryza sativa (japonica
cultivar-group)]
Length = 784
Score = 115 bits (288), Expect = 2e-25
Identities = 53/100 (53%), Positives = 70/100 (70%)
Frame = -3
Query: 465 YKTFNNNMFELAAYELMSANNAPERDPMDWILEGSNDKGISWQVLDKQTSQFFEDRFQRR 286
YK + EL +Y+LMSAN+ PERDPMDW+LEGS D G +W +D ++S F+ RF R+
Sbjct: 684 YKMLDGQTCELDSYDLMSANDVPERDPMDWVLEGSTDGGSTWNTIDARSSVIFDSRFYRK 743
Query: 285 TYTINSASFPSNVFRFRFLAVRDINSTSRLQIGSIDLYAK 166
T+T++ + +N FRFRFL VR+ N R QIGSIDLY K
Sbjct: 744 TFTVDK-RYKANAFRFRFLRVRESNGNPRFQIGSIDLYGK 782
>pir||T35669 hypothetical ATP/GTP binding protein - Streptomyces coelicolor
(fragment)
Length = 626
Score = 65.5 bits (158), Expect = 3e-10
Identities = 36/96 (37%), Positives = 54/96 (55%), Gaps = 1/96 (1%)
Frame = -3
Query: 438 ELAAYELMSANNAPERDPMDWILEGSNDKGISWQVLDKQTSQFFEDRFQRRTYTI-NSAS 262
++A Y L SAN+ ERDP+DW L+GS D G +WQ LD ++ + F+ RFQ RTY + +A
Sbjct: 135 KIAKYALTSANDHDERDPLDWTLKGSAD-GENWQTLDTRSGEHFDGRFQTRTYELAETAE 193
Query: 261 FPSNVFRFRFLAVRDINSTSRLQIGSIDLYAKQREI 154
F FR ++ + LQ+ + L E+
Sbjct: 194 FQ----HFRLEITKNNGAGDALQLADVQLATSDTEV 225
>emb|CAD55244.1| putative secreted ATP/GTP binding protein [Streptomyces coelicolor
A3(2)]
Length = 1268
Score = 65.5 bits (158), Expect = 3e-10
Identities = 36/96 (37%), Positives = 54/96 (55%), Gaps = 1/96 (1%)
Frame = -3
Query: 438 ELAAYELMSANNAPERDPMDWILEGSNDKGISWQVLDKQTSQFFEDRFQRRTYTI-NSAS 262
++A Y L SAN+ ERDP+DW L+GS D G +WQ LD ++ + F+ RFQ RTY + +A
Sbjct: 135 KIAKYALTSANDHDERDPLDWTLKGSAD-GENWQTLDTRSGEHFDGRFQTRTYELAETAE 193
Query: 261 FPSNVFRFRFLAVRDINSTSRLQIGSIDLYAKQREI 154
F FR ++ + LQ+ + L E+
Sbjct: 194 FQ----HFRLEITKNNGAGDALQLADVQLATSDTEV 225
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 380,675,999
Number of Sequences: 1393205
Number of extensions: 7493512
Number of successful extensions: 20357
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 19962
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20352
length of database: 448,689,247
effective HSP length: 113
effective length of database: 291,257,082
effective search space used: 12232797444
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
