Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC017249A_C01 KMC017249A_c01
(585 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_190742.1| leucine-rich repeat transmembrane protein kinas... 184 9e-46
gb|AAM44273.1| receptor-like kinase RHG1 [Glycine max] gi|212393... 178 5e-44
ref|NP_191169.1| leucine-rich repeat transmembrane protein kinas... 164 6e-40
dbj|BAC43256.1| unknown protein [Arabidopsis thaliana] gi|289507... 164 6e-40
ref|NP_187480.1| leucine-rich repeat transmembrane protein kinas... 113 2e-24
>ref|NP_190742.1| leucine-rich repeat transmembrane protein kinase, putative; protein
id: At3g51740.1, supported by cDNA: gi_13937245,
supported by cDNA: gi_15450869 [Arabidopsis thaliana]
gi|11346398|pir||T46070 hypothetical protein T18N14.120 -
Arabidopsis thaliana gi|6580156|emb|CAB63160.1| putative
protein [Arabidopsis thaliana]
gi|13937246|gb|AAK50115.1|AF372978_1 AT3g51740/T18N14_120
[Arabidopsis thaliana] gi|15450870|gb|AAK96706.1|
putative protein [Arabidopsis thaliana]
Length = 836
Score = 184 bits (466), Expect = 9e-46
Identities = 89/114 (78%), Positives = 98/114 (85%)
Frame = -3
Query: 583 PELSKTKKPNTKTDVYSLGVIILELLTGKPPGEPTNVMDLPQWVASIVKEEWTNEVFDLE 404
PE SK K + KTDVYSLG+IILELLTGK PGEPTN MDLPQWVASIVKEEWTNEVFDLE
Sbjct: 706 PEFSKIKNASAKTDVYSLGIIILELLTGKSPGEPTNGMDLPQWVASIVKEEWTNEVFDLE 765
Query: 403 LMRDAPAIGDELLNTLKLALHCVDPSPAARPEVKQVLQQLEEIKPELVPEDDGT 242
LMR+ ++GDELLNTLKLALHCVDPSPAARPE QV++QLEEI+PE E + T
Sbjct: 766 LMRETQSVGDELLNTLKLALHCVDPSPAARPEANQVVEQLEEIRPETEVETETT 819
>gb|AAM44273.1| receptor-like kinase RHG1 [Glycine max] gi|21239382|gb|AAM44274.1|
receptor-like kinase RHG1 [Glycine max]
Length = 855
Score = 178 bits (451), Expect = 5e-44
Identities = 86/106 (81%), Positives = 94/106 (88%)
Frame = -3
Query: 583 PELSKTKKPNTKTDVYSLGVIILELLTGKPPGEPTNVMDLPQWVASIVKEEWTNEVFDLE 404
PELSK KK NTKTD+YSLGVI+LELLT K PG N +DLPQWVAS+VKEEWTNEVFD +
Sbjct: 738 PELSKLKKANTKTDIYSLGVILLELLTRKSPGVSMNGLDLPQWVASVVKEEWTNEVFDAD 797
Query: 403 LMRDAPAIGDELLNTLKLALHCVDPSPAARPEVKQVLQQLEEIKPE 266
LMRDA +GDELLNTLKLALHCVDPSP+ARPEV QVLQQLEEI+PE
Sbjct: 798 LMRDASTVGDELLNTLKLALHCVDPSPSARPEVHQVLQQLEEIRPE 843
>ref|NP_191169.1| leucine-rich repeat transmembrane protein kinase, putative; protein
id: At3g56100.1 [Arabidopsis thaliana]
gi|11346428|pir||T47727 hypothetical protein F18O21.60 -
Arabidopsis thaliana gi|7572908|emb|CAB87409.1| putative
protein [Arabidopsis thaliana]
Length = 719
Score = 164 bits (416), Expect = 6e-40
Identities = 84/123 (68%), Positives = 96/123 (77%)
Frame = -3
Query: 583 PELSKTKKPNTKTDVYSLGVIILELLTGKPPGEPTNVMDLPQWVASIVKEEWTNEVFDLE 404
PELSK KK NTKTDVYSLGVIILELLTGK P E N +DLPQWVA+ VKEEWTNEVFDLE
Sbjct: 592 PELSKLKKANTKTDVYSLGVIILELLTGKSPSEALNGVDLPQWVATAVKEEWTNEVFDLE 651
Query: 403 LMRDAPAIGDELLNTLKLALHCVDPSPAARPEVKQVLQQLEEIKPELVPEDDGTKAQTTE 224
L+ D +GDE+LNTLKLALHCVD +P+ RPE +QV+ QL EI+PE T A T+E
Sbjct: 652 LLNDVNTMGDEILNTLKLALHCVDATPSTRPEAQQVMTQLGEIRPE------ETTATTSE 705
Query: 223 *LV 215
L+
Sbjct: 706 PLI 708
>dbj|BAC43256.1| unknown protein [Arabidopsis thaliana] gi|28950763|gb|AAO63305.1|
At3g56100 [Arabidopsis thaliana]
Length = 220
Score = 164 bits (416), Expect = 6e-40
Identities = 84/123 (68%), Positives = 96/123 (77%)
Frame = -3
Query: 583 PELSKTKKPNTKTDVYSLGVIILELLTGKPPGEPTNVMDLPQWVASIVKEEWTNEVFDLE 404
PELSK KK NTKTDVYSLGVIILELLTGK P E N +DLPQWVA+ VKEEWTNEVFDLE
Sbjct: 93 PELSKLKKANTKTDVYSLGVIILELLTGKSPSEALNGVDLPQWVATAVKEEWTNEVFDLE 152
Query: 403 LMRDAPAIGDELLNTLKLALHCVDPSPAARPEVKQVLQQLEEIKPELVPEDDGTKAQTTE 224
L+ D +GDE+LNTLKLALHCVD +P+ RPE +QV+ QL EI+PE T A T+E
Sbjct: 153 LLNDVNTMGDEILNTLKLALHCVDATPSTRPEAQQVMTQLGEIRPE------ETTATTSE 206
Query: 223 *LV 215
L+
Sbjct: 207 PLI 209
>ref|NP_187480.1| leucine-rich repeat transmembrane protein kinase, putative; protein
id: At3g08680.1, supported by cDNA: gi_15982756
[Arabidopsis thaliana]
gi|12322735|gb|AAG51359.1|AC012562_20 putative protein
kinase; 49514-51513 [Arabidopsis thaliana]
Length = 640
Score = 113 bits (282), Expect = 2e-24
Identities = 53/123 (43%), Positives = 83/123 (67%), Gaps = 3/123 (2%)
Frame = -3
Query: 583 PELSKTKKPNTKTDVYSLGVIILELLTGKPPGEPTN---VMDLPQWVASIVKEEWTNEVF 413
PE +T+K K+DVYS GV++LE+LTGK G+ T V+DLP+WV S+V+EEWT EVF
Sbjct: 509 PEAIETRKHTQKSDVYSFGVLLLEMLTGKAAGKTTGHEEVVDLPKWVQSVVREEWTGEVF 568
Query: 412 DLELMRDAPAIGDELLNTLKLALHCVDPSPAARPEVKQVLQQLEEIKPELVPEDDGTKAQ 233
D+EL++ + +E++ L++A+ CV P +RP +++V+ +EEI+P G +A
Sbjct: 569 DVELIKQQHNVEEEMVQMLQIAMACVSKHPDSRPSMEEVVNMMEEIRPSGSGPGSGNRAS 628
Query: 232 TTE 224
+ E
Sbjct: 629 SPE 631
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 498,713,909
Number of Sequences: 1393205
Number of extensions: 11150128
Number of successful extensions: 41537
Number of sequences better than 10.0: 2589
Number of HSP's better than 10.0 without gapping: 38653
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 40691
length of database: 448,689,247
effective HSP length: 117
effective length of database: 285,684,262
effective search space used: 21997688174
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
