Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC017245A_C01 KMC017245A_c01
(523 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||C84667 probable protein kinase [imported] - Arabidopsis tha... 145 2e-34
pir||T14735 probable serine/threonine kinase (EC 2.7.1.-) SNFL1 ... 143 1e-33
pir||T14736 probable serine/threonine kinase (EC 2.7.1.-) SNFL2 ... 139 2e-32
gb|AAO73884.1| NAF specific protein kinase family [Arabidopsis t... 134 6e-31
dbj|BAC10350.1| putative serine/threonine kinase [Oryza sativa (... 125 3e-28
>pir||C84667 probable protein kinase [imported] - Arabidopsis thaliana
gi|20268690|gb|AAM14049.1| putative protein kinase
[Arabidopsis thaliana] gi|23296954|gb|AAN13209.1|
putative protein kinase [Arabidopsis thaliana]
Length = 441
Score = 145 bits (367), Expect = 2e-34
Identities = 72/88 (81%), Positives = 80/88 (90%)
Frame = -2
Query: 522 IEEAAKPLGFDVQKKNYKMRLANVKAGRKGNLNVATEVFQVAPSLHMVEVRKAKGDTLEF 343
IEEAAKPLGFDVQKKNYKMRL NVKAGRKGNLNVATE+FQVAPSLHMV+V K+KGDTLEF
Sbjct: 355 IEEAAKPLGFDVQKKNYKMRLENVKAGRKGNLNVATEIFQVAPSLHMVQVSKSKGDTLEF 414
Query: 342 HKFYKKLSTCLEDVVWKTEDDMQKQEAK 259
HKFYKKLS LE VVW T ++++K+ AK
Sbjct: 415 HKFYKKLSNSLEQVVW-TNNEVKKETAK 441
>pir||T14735 probable serine/threonine kinase (EC 2.7.1.-) SNFL1 - sorghum
gi|2632252|emb|CAA73067.1| serine/threonine kinase
[Sorghum bicolor]
Length = 440
Score = 143 bits (361), Expect = 1e-33
Identities = 69/80 (86%), Positives = 74/80 (92%)
Frame = -2
Query: 522 IEEAAKPLGFDVQKKNYKMRLANVKAGRKGNLNVATEVFQVAPSLHMVEVRKAKGDTLEF 343
IEEAAKPLGFDVQKKNYK+RL VKAGRKGNLNVATE+ QVAPSLHMVEVRKAKGDTLEF
Sbjct: 354 IEEAAKPLGFDVQKKNYKLRLEKVKAGRKGNLNVATEILQVAPSLHMVEVRKAKGDTLEF 413
Query: 342 HKFYKKLSTCLEDVVWKTED 283
HKFYK LS L+DVVWK++D
Sbjct: 414 HKFYKNLSKTLKDVVWKSDD 433
>pir||T14736 probable serine/threonine kinase (EC 2.7.1.-) SNFL2 - sorghum
gi|2632254|emb|CAA73068.1| serine/threonine kinase
[Sorghum bicolor]
Length = 440
Score = 139 bits (351), Expect = 2e-32
Identities = 71/87 (81%), Positives = 76/87 (86%)
Frame = -2
Query: 522 IEEAAKPLGFDVQKKNYKMRLANVKAGRKGNLNVATEVFQVAPSLHMVEVRKAKGDTLEF 343
IEEAAKPLGF VQKKNYK+RL VKAGRKGNLNVATE+ QVAPSLHMVEVRKAKGDTLEF
Sbjct: 354 IEEAAKPLGFGVQKKNYKLRLEKVKAGRKGNLNVATEILQVAPSLHMVEVRKAKGDTLEF 413
Query: 342 HKFYKKLSTCLEDVVWKTEDDMQKQEA 262
KFYK LS L+DVVWK+E D+Q Q A
Sbjct: 414 QKFYKNLSKTLKDVVWKSE-DLQMQPA 439
>gb|AAO73884.1| NAF specific protein kinase family [Arabidopsis thaliana]
Length = 452
Score = 134 bits (337), Expect = 6e-31
Identities = 66/84 (78%), Positives = 72/84 (85%), Gaps = 6/84 (7%)
Frame = -2
Query: 522 IEEAAKPLGFDVQKKNYK------MRLANVKAGRKGNLNVATEVFQVAPSLHMVEVRKAK 361
IEEA+KPLGFD+QKKNYK MRL NV AGRKGNL VATE+FQV+PSLHM+EVRK K
Sbjct: 361 IEEASKPLGFDIQKKNYKRYLCTQMRLENVTAGRKGNLRVATEIFQVSPSLHMIEVRKTK 420
Query: 360 GDTLEFHKFYKKLSTCLEDVVWKT 289
GDTLEFHKFYKKLST L DVVWK+
Sbjct: 421 GDTLEFHKFYKKLSTSLNDVVWKS 444
>dbj|BAC10350.1| putative serine/threonine kinase [Oryza sativa (japonica
cultivar-group)]
Length = 445
Score = 125 bits (314), Expect = 3e-28
Identities = 58/80 (72%), Positives = 72/80 (89%)
Frame = -2
Query: 522 IEEAAKPLGFDVQKKNYKMRLANVKAGRKGNLNVATEVFQVAPSLHMVEVRKAKGDTLEF 343
IEEAA LGF++QK+NY+MR+ N+K GRKG+LN+ATEVFQVAPSLH+VE++KAKGDTLEF
Sbjct: 360 IEEAANLLGFNIQKRNYRMRMENIKEGRKGHLNIATEVFQVAPSLHVVELKKAKGDTLEF 419
Query: 342 HKFYKKLSTCLEDVVWKTED 283
KFY+ LST L+DVVW+ ED
Sbjct: 420 QKFYQTLSTQLKDVVWELED 439
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 450,229,561
Number of Sequences: 1393205
Number of extensions: 9618195
Number of successful extensions: 26515
Number of sequences better than 10.0: 86
Number of HSP's better than 10.0 without gapping: 25596
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26492
length of database: 448,689,247
effective HSP length: 115
effective length of database: 288,470,672
effective search space used: 16731298976
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
