Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC017241A_C01 KMC017241A_c01
(900 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_172007.1| putative O-GlcNAc transferase; protein id: At1g... 229 3e-59
gb|AAL15891.1|AF417303_1 O-GlcNAc-transferase-like protein [Cast... 222 5e-57
pir||T02544 hypothetical protein T26B15.1 - Arabidopsis thaliana... 220 2e-56
ref|NP_180804.1| putative O-GlcNAc transferase; protein id: At2g... 220 2e-56
emb|CAA68070.1| dystrophin-like protein [Asteroidea] 41 0.022
>ref|NP_172007.1| putative O-GlcNAc transferase; protein id: At1g05150.1 [Arabidopsis
thaliana] gi|25406832|pir||G86185 hypothetical protein
[imported] - Arabidopsis thaliana
gi|2388582|gb|AAB71463.1| Contains similarity to Rattus
O-GlcNAc transferase (gb|U76557). [Arabidopsis thaliana]
Length = 808
Score = 229 bits (585), Expect = 3e-59
Identities = 105/157 (66%), Positives = 130/157 (81%), Gaps = 3/157 (1%)
Frame = -3
Query: 898 LLWRPMNEDGANIRKIDAATYIKLLRAVYVPSIGASELMEVRGD--ADTSM-VSFSEFLV 728
LLWRP+NE + I K DA YIKLLRA+Y+PS G SE++EV G+ A++S+ V+F++FL
Sbjct: 648 LLWRPVNEGSSQITKTDAVKYIKLLRAIYIPSHGMSEMLEVHGEEEAESSVTVTFNQFLA 707
Query: 727 MFDDPDWGFGIMPTLLKLEAGDRNRHGNTVCSICHYPIIGSRFKEIKSHFSLCNQCYSEG 548
MFDDPDWGFGIM T+LKLEA DRNRHGN VCS+C YP+IGSRFKE+K+ FSLCNQCY EG
Sbjct: 708 MFDDPDWGFGIMSTILKLEANDRNRHGNQVCSVCRYPVIGSRFKEVKARFSLCNQCYGEG 767
Query: 547 KVPSTIKQEEYRFKEYGSEGEAMKDKCMCFNLQSRNE 437
KVP + KQEEY+F+EY SE EAMK KC+CF++QS +
Sbjct: 768 KVPPSFKQEEYKFREYESEAEAMKAKCVCFSMQSHKK 804
>gb|AAL15891.1|AF417303_1 O-GlcNAc-transferase-like protein [Castanea sativa]
Length = 132
Score = 222 bits (566), Expect = 5e-57
Identities = 101/129 (78%), Positives = 113/129 (87%)
Frame = -3
Query: 853 IDAATYIKLLRAVYVPSIGASELMEVRGDADTSMVSFSEFLVMFDDPDWGFGIMPTLLKL 674
+DA YIKLLRA++VPS G SE+ME+ G+ S++S++EFLVM DDPDWGFGIMPTLLKL
Sbjct: 1 VDAVRYIKLLRAIFVPSQGVSEMMEIHGETHDSLMSYTEFLVMLDDPDWGFGIMPTLLKL 60
Query: 673 EAGDRNRHGNTVCSICHYPIIGSRFKEIKSHFSLCNQCYSEGKVPSTIKQEEYRFKEYGS 494
E GDRNRHG VCS+C YPIIGSRFKE+KSHFSLCNQCYSEGKVPST K EEYRFKEYGS
Sbjct: 61 ETGDRNRHGQHVCSVCRYPIIGSRFKEMKSHFSLCNQCYSEGKVPSTYKLEEYRFKEYGS 120
Query: 493 EGEAMKDKC 467
E EAMKDKC
Sbjct: 121 EAEAMKDKC 129
>pir||T02544 hypothetical protein T26B15.1 - Arabidopsis thaliana (fragment)
Length = 460
Score = 220 bits (561), Expect = 2e-56
Identities = 101/156 (64%), Positives = 128/156 (81%), Gaps = 2/156 (1%)
Frame = -3
Query: 898 LLWRPMNEDGANIRKIDAATYIKLLRAVYVPSIGASELMEVRGDAD-TSMVSFSEFLVMF 722
LLW+P+NE + I K++A YIKLLRA+Y+PS G SE++EV G++D TS V+F++FL M+
Sbjct: 301 LLWKPVNEGSSQITKMEAVKYIKLLRAIYIPSQGMSEMLEVHGESDDTSTVTFNQFLEMY 360
Query: 721 DDPDWGFGIMPTLLKLEAGDRNRHGNTVCSICHYPIIGSRFKEIKSHFSLCNQCYSEGKV 542
DD +WGFGIM T+ KLE DRNRHGN VCS+C YPIIGSRFKE+K+ FSLCNQCYSEGK+
Sbjct: 361 DDSEWGFGIMSTVFKLETRDRNRHGNQVCSVCRYPIIGSRFKEVKTGFSLCNQCYSEGKI 420
Query: 541 PSTIK-QEEYRFKEYGSEGEAMKDKCMCFNLQSRNE 437
P T K QEEY+F+EY SE EAMK KC+CF++QS +
Sbjct: 421 PPTFKQQEEYKFREYASEVEAMKAKCVCFSMQSHKK 456
>ref|NP_180804.1| putative O-GlcNAc transferase; protein id: At2g32450.1 [Arabidopsis
thaliana] gi|25408236|pir||C84733 probable O-GlcNAc
transferase [imported] - Arabidopsis thaliana
gi|20197430|gb|AAM15073.1| putative O-GlcNAc transferase
[Arabidopsis thaliana] gi|28393656|gb|AAO42246.1|
putative O-GlcNAc transferase [Arabidopsis thaliana]
gi|28973559|gb|AAO64104.1| putative O-GlcNAc transferase
[Arabidopsis thaliana]
Length = 802
Score = 220 bits (561), Expect = 2e-56
Identities = 101/156 (64%), Positives = 128/156 (81%), Gaps = 2/156 (1%)
Frame = -3
Query: 898 LLWRPMNEDGANIRKIDAATYIKLLRAVYVPSIGASELMEVRGDAD-TSMVSFSEFLVMF 722
LLW+P+NE + I K++A YIKLLRA+Y+PS G SE++EV G++D TS V+F++FL M+
Sbjct: 643 LLWKPVNEGSSQITKMEAVKYIKLLRAIYIPSQGMSEMLEVHGESDDTSTVTFNQFLEMY 702
Query: 721 DDPDWGFGIMPTLLKLEAGDRNRHGNTVCSICHYPIIGSRFKEIKSHFSLCNQCYSEGKV 542
DD +WGFGIM T+ KLE DRNRHGN VCS+C YPIIGSRFKE+K+ FSLCNQCYSEGK+
Sbjct: 703 DDSEWGFGIMSTVFKLETRDRNRHGNQVCSVCRYPIIGSRFKEVKTGFSLCNQCYSEGKI 762
Query: 541 PSTIK-QEEYRFKEYGSEGEAMKDKCMCFNLQSRNE 437
P T K QEEY+F+EY SE EAMK KC+CF++QS +
Sbjct: 763 PPTFKQQEEYKFREYASEVEAMKAKCVCFSMQSHKK 798
>emb|CAA68070.1| dystrophin-like protein [Asteroidea]
Length = 471
Score = 41.2 bits (95), Expect = 0.022
Identities = 24/79 (30%), Positives = 44/79 (55%), Gaps = 5/79 (6%)
Frame = -3
Query: 694 MPTLLKLEAGDRNRHGNTVCSIC-HYPIIGSRFKEIKS-HFSLCNQCYSEGKVPSTIKQE 521
MP L ++ AG+ +H C++C +PI+G R++ +K +F +C C+ G+V K
Sbjct: 213 MPVLHRMAAGETAKH-QAKCNVCKEFPIVGLRYRCLKCFNFYMCQNCFFSGRVSKNHK-H 270
Query: 520 EYRFKEY---GSEGEAMKD 473
+ +EY + GE ++D
Sbjct: 271 SHPMQEYCTTTTSGEDVRD 289
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 732,003,312
Number of Sequences: 1393205
Number of extensions: 15251892
Number of successful extensions: 35151
Number of sequences better than 10.0: 49
Number of HSP's better than 10.0 without gapping: 33789
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 35126
length of database: 448,689,247
effective HSP length: 122
effective length of database: 278,718,237
effective search space used: 49333127949
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
