Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC017240A_C01 KMC017240A_c01
(546 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAD21872.1| receptor-like protein kinase homolog RK20-1 [Phas... 139 2e-32
ref|NP_193872.2| serine threonine kinase - like protein; protein... 114 6e-25
ref|NP_193871.1| serine threonine protein kinase - like protein;... 109 2e-23
pir||T05149 protein kinase homolog F18E5.30 - Arabidopsis thalia... 107 7e-23
emb|CAC83607.1| putative receptor-like serine-threonine protein ... 106 2e-22
>gb|AAD21872.1| receptor-like protein kinase homolog RK20-1 [Phaseolus vulgaris]
Length = 666
Score = 139 bits (351), Expect = 2e-32
Identities = 73/129 (56%), Positives = 90/129 (69%)
Frame = -1
Query: 525 KNDKXIHQGENVEYLLSFAWRNWREGTATNVIDPSLNRISPDEIIRCIHIGLLCVQENLA 346
KN H GENVE LLSF WRNWR+GTA N++DPSL S +E++RCIHIGLLCVQENL
Sbjct: 539 KNSGFRH-GENVEDLLSFTWRNWRDGTAVNIVDPSLENNSRNEVMRCIHIGLLCVQENLT 597
Query: 345 DRPTMASVALMLNSYSLSLPVPSKPAFFMDNTTGSLLAMQLSEDDLRPTRST*STSNSAR 166
DRPTMA++ LML+SYSL LP+PS+PAF+ ++T SL A R T + SA+
Sbjct: 598 DRPTMATIMLMLSSYSLGLPIPSEPAFYANSTARSLPATSSWGHSSRAT-----ANQSAQ 652
Query: 165 ESTRLQSLT 139
ES S+T
Sbjct: 653 ESENENSIT 661
>ref|NP_193872.2| serine threonine kinase - like protein; protein id: At4g21410.1,
supported by cDNA: gi_18650593 [Arabidopsis thaliana]
gi|18650594|gb|AAL75897.1| AT4g21410/T6K22_140
[Arabidopsis thaliana]
Length = 679
Score = 114 bits (286), Expect = 6e-25
Identities = 57/103 (55%), Positives = 75/103 (72%), Gaps = 6/103 (5%)
Frame = -1
Query: 498 ENVEYLLSFAWRNWREGTATNVIDPSLNRISPDEIIRCIHIGLLCVQENLADRPTMASVA 319
E+ E LLS+ WR+WRE T +VIDPSL S +EI+RCIHIGLLCVQE+ A RPTMA+V+
Sbjct: 569 EDAEDLLSWVWRSWREDTILSVIDPSLTAGSRNEILRCIHIGLLCVQESAATRPTMATVS 628
Query: 318 LMLNSYSLSLPVPSKPAFFMD------NTTGSLLAMQLSEDDL 208
LMLNSYS +LP P +PAF ++ N + S +Q+S +D+
Sbjct: 629 LMLNSYSFTLPTPLRPAFVLESVVIPSNVSSSTEGLQMSSNDV 671
>ref|NP_193871.1| serine threonine protein kinase - like protein; protein id:
At4g21400.1 [Arabidopsis thaliana]
gi|7488245|pir||T05148 protein kinase homolog F18E5.20 -
Arabidopsis thaliana gi|3080384|emb|CAA18704.1|
serine/threonine protein kinase [Arabidopsis thaliana]
gi|3402759|emb|CAA20205.1| serine/threonine protein
kinase-like protein [Arabidopsis thaliana]
gi|7268937|emb|CAB81247.1| serine/threonine protein
kinase-like protein [Arabidopsis thaliana]
Length = 711
Score = 109 bits (273), Expect = 2e-23
Identities = 55/95 (57%), Positives = 67/95 (69%)
Frame = -1
Query: 522 NDKXIHQGENVEYLLSFAWRNWREGTATNVIDPSLNRISPDEIIRCIHIGLLCVQENLAD 343
N+ + E E LLS+ WR WRE +VIDPSL S EI+RCIHIGLLCVQE+ A
Sbjct: 593 NNGRSNDDEEAENLLSWVWRCWREDIILSVIDPSLTTGSRSEILRCIHIGLLCVQESPAS 652
Query: 342 RPTMASVALMLNSYSLSLPVPSKPAFFMDNTTGSL 238
RPTM SVALMLNSYS +LP PS+PAF +++ S+
Sbjct: 653 RPTMDSVALMLNSYSYTLPTPSRPAFALESVMPSM 687
>pir||T05149 protein kinase homolog F18E5.30 - Arabidopsis thaliana
gi|3080385|emb|CAA18705.1| serine/threonine protein
kinase [Arabidopsis thaliana] gi|3402760|emb|CAA20206.1|
serine/threonine kinase-like protein [Arabidopsis
thaliana] gi|7268938|emb|CAB81248.1| serine/threonine
kinase-like protein [Arabidopsis thaliana]
Length = 683
Score = 107 bits (268), Expect = 7e-23
Identities = 53/98 (54%), Positives = 71/98 (72%), Gaps = 6/98 (6%)
Frame = -1
Query: 483 LLSFAWRNWREGTATNVIDPSLNRISPDEIIRCIHIGLLCVQENLADRPTMASVALMLNS 304
L++ WR+WRE T +VIDPSL S +EI+RCIHIGLLCVQE+ A RPTMA+V+LMLNS
Sbjct: 578 LVNGVWRSWREDTILSVIDPSLTAGSRNEILRCIHIGLLCVQESAATRPTMATVSLMLNS 637
Query: 303 YSLSLPVPSKPAFFMD------NTTGSLLAMQLSEDDL 208
YS +LP P +PAF ++ N + S +Q+S +D+
Sbjct: 638 YSFTLPTPLRPAFVLESVVIPSNVSSSTEGLQMSSNDV 675
>emb|CAC83607.1| putative receptor-like serine-threonine protein kinase [Solanum
tuberosum]
Length = 676
Score = 106 bits (265), Expect = 2e-22
Identities = 61/120 (50%), Positives = 82/120 (67%), Gaps = 4/120 (3%)
Frame = -1
Query: 501 GENVEYLLSFAWRNWREGTATNVIDPSLNRISP--DEIIRCIHIGLLCVQENLADRPTMA 328
GE+VE LLSFAW +WR GT N +DP L + +I+R IHI LLCVQE++ADRPTMA
Sbjct: 549 GESVEDLLSFAWSSWRNGTTINFVDPMLKESTGLIRDIMRNIHIALLCVQESVADRPTMA 608
Query: 327 SVALMLNSYSLSLPVPSKPAFFMDN--TTGSLLAMQLSEDDLRPTRST*STSNSARESTR 154
+V LML+S+SLSLP+PS PAF+M + T G+ L + E + R T S+ + + S+R
Sbjct: 609 AVVLMLSSFSLSLPMPSGPAFYMHSNITAGTSL---IQEYNTRVTDSSERVKSKSIGSSR 665
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 463,507,947
Number of Sequences: 1393205
Number of extensions: 9244652
Number of successful extensions: 21256
Number of sequences better than 10.0: 529
Number of HSP's better than 10.0 without gapping: 20561
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21052
length of database: 448,689,247
effective HSP length: 116
effective length of database: 287,077,467
effective search space used: 18660035355
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
