KMC017232A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KMC017232A_C01 KMC017232A_c01
gagctgggccaacaagtttcatccatcgctgtgtcttttgtaagtccagcactgtgatta
agggcaatggTATTACAATACTATCAACTTAATTTATTTTAAACTCAAAATGGACAAATA
AGTTAGCATTACAAAAGTTCTGAATTGTTTTTTTTTTTCCCTCAGACAAATTGATCAAGG
AGCTCATCCACAGTGGTGTACTTAACATCTGGATAGAGCGATGATGCTTCTACTCCAAAG
GATTGCTCAATTTCAAAGTAGGTTTGATCTCCTTTCACATAGACAGCATGACTGATTGCC
AGCATCACACTGTTGGGTACAGGGGACTCTTTAATTTGCTTCAAGACTTGATCCTCAGGA
ACATAGACTCTTTCAAGAGTCTTACCAATTTTCTTCTCCCAAAGAGAAACCAGGTCATTA
AATGACAAGGTGTTGGCTGGAGGTCTGATGTATAGGATCTTGTTCAAGGTTCTTGGATCA
CTAACAGCTCTGATGGTATAGGTGCCAATGTCATCTTCCTTGTTAAAAACACATTTGGGG
TTTCCATCCCCTAGGATAACTACTTTATCCCTTGGGGGAGTTGTGACTCCAGGCTGTGAC
AAAGTGGACAGGAAGTAACTAGCAAAAAAGTTGCAGGACACAATGGTGTG


Nr search

BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KMC017232A_C01 KMC017232A_c01
         (650 letters)

Database: nr 
           1,393,205 sequences; 448,689,247 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

gb|AAC24001.1| isoflavone reductase related protein [Pyrus commu...   266  2e-70
ref|NP_195634.1| isoflavone reductase, putative; protein id: At4...   259  3e-68
gb|AAL85023.1| putative NAD(P)H oxidoreductase, isoflavone reduc...   257  8e-68
gb|AAF17578.1|AF202184_1 isoflavone reductase homolog 2 [Glycine...   254  9e-67
gb|AAG22740.1|AF282850_1 allergenic isoflavone reductase-like pr...   250  1e-65

>gb|AAC24001.1| isoflavone reductase related protein [Pyrus communis]
          Length = 308

 Score =  266 bits (679), Expect = 2e-70
 Identities = 127/162 (78%), Positives = 147/162 (90%)
 Frame = -1

Query: 650 HTIVSCNFFASYFLSTLSQPGVTTPPRDKVVILGDGNPKCVFNKEDDIGTYTIRAVSDPR 471
           +T VS NFFA YFL TL+QPG ++ PRDKVVILGDGNPK +FNKEDDIGTYTIRAV DPR
Sbjct: 147 YTYVSSNFFAGYFLPTLNQPGASSAPRDKVVILGDGNPKAIFNKEDDIGTYTIRAVDDPR 206

Query: 470 TLNKILYIRPPANTLSFNDLVSLWEKKIGKTLERVYVPEDQVLKQIKESPVPNSVMLAIS 291
           TLNK+LYIRPPANT+SFN+LVSLWEKKIGKTLER+YVPE+Q+LK I+E+ VP +V+L+IS
Sbjct: 207 TLNKVLYIRPPANTISFNELVSLWEKKIGKTLERIYVPEEQLLKNIQEAAVPLNVILSIS 266

Query: 290 HAVYVKGDQTYFEIEQSFGVEASSLYPDVKYTTVDELLDQFV 165
           HAV+VKGD T FEIE SFGVEA++LYPDVKYTTVDE L+QFV
Sbjct: 267 HAVFVKGDHTNFEIEPSFGVEATALYPDVKYTTVDEYLNQFV 308

>ref|NP_195634.1| isoflavone reductase, putative; protein id: At4g39230.1, supported
           by cDNA: gi_19310584 [Arabidopsis thaliana]
           gi|7484776|pir||T08571 2'-hydroxyisoflavone reductase
           (EC 1.3.1.45) T22F8.130 - Arabidopsis thaliana
           gi|4914435|emb|CAB43638.1| NAD(P)H oxidoreductase,
           isoflavone reductase-like protein [Arabidopsis thaliana]
           gi|7270906|emb|CAB80586.1| NAD(P)H oxidoreductase,
           isoflavone reductase-like protein [Arabidopsis thaliana]
           gi|23297378|gb|AAN12954.1| putative NAD(P)H
           oxidoreductase, isoflavone reductase [Arabidopsis
           thaliana]
          Length = 308

 Score =  259 bits (661), Expect = 3e-68
 Identities = 124/162 (76%), Positives = 140/162 (85%)
 Frame = -1

Query: 650 HTIVSCNFFASYFLSTLSQPGVTTPPRDKVVILGDGNPKCVFNKEDDIGTYTIRAVSDPR 471
           +T VSCNFFA YFL TL+QPG T+ PRDKV++LGDGNPK VFNKE+DIGTYTI AV DPR
Sbjct: 147 YTYVSCNFFAGYFLPTLAQPGATSAPRDKVIVLGDGNPKAVFNKEEDIGTYTINAVDDPR 206

Query: 470 TLNKILYIRPPANTLSFNDLVSLWEKKIGKTLERVYVPEDQVLKQIKESPVPNSVMLAIS 291
           TLNKILYIRPP NT SFNDLVSLWE KIGKTLER+YVPE+Q+LKQI ES  P +VML++ 
Sbjct: 207 TLNKILYIRPPMNTYSFNDLVSLWENKIGKTLERIYVPEEQLLKQIIESSPPLNVMLSLC 266

Query: 290 HAVYVKGDQTYFEIEQSFGVEASSLYPDVKYTTVDELLDQFV 165
           H V+VKG  T FEIE SFGVEAS LYPDVKYTTVDE+L+Q+V
Sbjct: 267 HCVFVKGGHTSFEIEPSFGVEASELYPDVKYTTVDEILNQYV 308

>gb|AAL85023.1| putative NAD(P)H oxidoreductase, isoflavone reductase [Arabidopsis
           thaliana]
          Length = 308

 Score =  257 bits (657), Expect = 8e-68
 Identities = 123/162 (75%), Positives = 140/162 (85%)
 Frame = -1

Query: 650 HTIVSCNFFASYFLSTLSQPGVTTPPRDKVVILGDGNPKCVFNKEDDIGTYTIRAVSDPR 471
           +T VSCNFFA YFL TL++PG T+ PRDKV++LGDGNPK VFNKE+DIGTYTI AV DPR
Sbjct: 147 YTYVSCNFFAGYFLPTLARPGATSAPRDKVIVLGDGNPKAVFNKEEDIGTYTINAVDDPR 206

Query: 470 TLNKILYIRPPANTLSFNDLVSLWEKKIGKTLERVYVPEDQVLKQIKESPVPNSVMLAIS 291
           TLNKILYIRPP NT SFNDLVSLWE KIGKTLER+YVPE+Q+LKQI ES  P +VML++ 
Sbjct: 207 TLNKILYIRPPMNTYSFNDLVSLWENKIGKTLERIYVPEEQLLKQIIESSPPLNVMLSLC 266

Query: 290 HAVYVKGDQTYFEIEQSFGVEASSLYPDVKYTTVDELLDQFV 165
           H V+VKG  T FEIE SFGVEAS LYPDVKYTTVDE+L+Q+V
Sbjct: 267 HCVFVKGGHTSFEIEPSFGVEASELYPDVKYTTVDEILNQYV 308

>gb|AAF17578.1|AF202184_1 isoflavone reductase homolog 2 [Glycine max]
          Length = 310

 Score =  254 bits (648), Expect = 9e-67
 Identities = 123/161 (76%), Positives = 140/161 (86%)
 Frame = -1

Query: 647 TIVSCNFFASYFLSTLSQPGVTTPPRDKVVILGDGNPKCVFNKEDDIGTYTIRAVSDPRT 468
           T VS NFFA YFL  LSQPG T  PRD+V+ILGDGNPK VFNKE+DIGTYTI +V DPRT
Sbjct: 150 TYVSSNFFAGYFLPNLSQPGATAAPRDRVIILGDGNPKAVFNKEEDIGTYTINSVDDPRT 209

Query: 467 LNKILYIRPPANTLSFNDLVSLWEKKIGKTLERVYVPEDQVLKQIKESPVPNSVMLAISH 288
           LNKILYIRPPANTLSFN+LV+LWE KIGKTLER+YVPE+Q+LKQI+ES  P +V+L+I+H
Sbjct: 210 LNKILYIRPPANTLSFNELVTLWEGKIGKTLERIYVPEEQLLKQIEESAPPVNVILSINH 269

Query: 287 AVYVKGDQTYFEIEQSFGVEASSLYPDVKYTTVDELLDQFV 165
           + YVKGD T FEIE SFGVEAS+LYPDVKY TVDE L+QFV
Sbjct: 270 SSYVKGDHTNFEIESSFGVEASALYPDVKYITVDEYLNQFV 310

>gb|AAG22740.1|AF282850_1 allergenic isoflavone reductase-like protein Bet v 6.0102 [Betula
           pendula]
          Length = 308

 Score =  250 bits (639), Expect = 1e-65
 Identities = 118/162 (72%), Positives = 142/162 (86%)
 Frame = -1

Query: 650 HTIVSCNFFASYFLSTLSQPGVTTPPRDKVVILGDGNPKCVFNKEDDIGTYTIRAVSDPR 471
           +T VS NFFA YFL TL+QPG+T+PPR+KVVI GDGN + VFNKEDDIGTYTIRAV DPR
Sbjct: 147 YTYVSSNFFAGYFLPTLAQPGLTSPPREKVVIFGDGNARAVFNKEDDIGTYTIRAVDDPR 206

Query: 470 TLNKILYIRPPANTLSFNDLVSLWEKKIGKTLERVYVPEDQVLKQIKESPVPNSVMLAIS 291
           TLNKI+YI+P  N  SFN++V+LWEKKIGKTLE++YVPE+++LK I+ESP+P +V+LAI+
Sbjct: 207 TLNKIVYIKPAKNIYSFNEIVALWEKKIGKTLEKIYVPEEKLLKDIQESPIPINVILAIN 266

Query: 290 HAVYVKGDQTYFEIEQSFGVEASSLYPDVKYTTVDELLDQFV 165
           H+V+VKGD T FEIE SFGVEAS LYPDVKYTTV+E L QFV
Sbjct: 267 HSVFVKGDHTNFEIEASFGVEASELYPDVKYTTVEEYLQQFV 308

  Database: nr
    Posted date:  Apr 1, 2003  2:05 AM
  Number of letters in database: 448,689,247
  Number of sequences in database:  1,393,205
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 552,394,990
Number of Sequences: 1393205
Number of extensions: 11616198
Number of successful extensions: 27274
Number of sequences better than 10.0: 68
Number of HSP's better than 10.0 without gapping: 26564
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27222
length of database: 448,689,247
effective HSP length: 118
effective length of database: 284,291,057
effective search space used: 27860523586
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)


EST assemble image


clone accession position
1 SPD010b04_f BP044766 1 520
2 SPDL089e08_f BP057594 58 652
3 SPDL089f08_f BP057602 120 600




Lotus japonicus
Kazusa DNA Research Institute