>KMC017203A_C01 KMC017203A_c01
gggcaaatctaatatttATTCAAAATTTGTAAATAAATACTTTCTCTGAATTAATGTGGA
TGTTGCACAATTGAAGAACAAACTGTTAATACAAGAAAATTGCTTGCCAATTCTGCTTCA
AGAACTACTTGTGTGAACTCTGGCAGCAATGACTAAATTTTAACTTAGATCAGTTCCAGT
TTGCTTTTCCGTTTGAACTTTGCCCTCTAGAATCGGATGATGAACCCGGCCCAGGAAAGT
TTGATCTCTTCTTCCTGTGAGTATTCCAGGATAACAGATGCTGGTTTAAACCACTTCCTC
TGACATCCTCGTACGCATGTCTCTGGAAATTTGTTCCTTCAGGCTTGAATCTCTTTGAGG
CAGGGGTCACATGGAAACTATCTTCTTCACTTGTTCTTTCGCTTGCCATGGAAGCACTTT
CAGCTCTATATAGTAAACTTTCTTCCGCCACCGCATTATCACTGGCTTGTGCAATGC

BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KMC017203A_C01 KMC017203A_c01
         (477 letters)

Database: nr 
           1,393,205 sequences; 448,689,247 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

ref|NP_187252.1| putative transcriptional regulator; protein id:...    48  5e-05
gb|EAA07939.1| agCP1271 [Anopheles gambiae str. PEST]                  38  0.064
ref|NP_197432.1| homeotic gene regulator - like protein; protein...    33  1.2
gb|AAN64487.1| hypothetical protein [Oryza sativa (japonica cult...    33  1.6
ref|NP_484415.1| probable integral membrane efflux protein [Nost...    33  2.0

>ref|NP_187252.1| putative transcriptional regulator; protein id: At3g06010.1
            [Arabidopsis thaliana]
            gi|6671969|gb|AAF23228.1|AC013454_15 putative
            transcriptional regulator [Arabidopsis thaliana]
          Length = 1132

 Score = 48.1 bits (113), Expect = 5e-05
 Identities = 30/80 (37%), Positives = 38/80 (47%), Gaps = 2/80 (2%)
 Frame = -3

Query: 421  ESASMASERTSEEDSFHVTPASKRFKPEGTNFQRHAYEDVRGSGLN--QHLLSWNTHRKK 248
            ES    S+ TSEED         +         +   E+  G   N  + +  WNTH+KK
Sbjct: 1049 ESIQTVSDGTSEEDEEEQEEERAKEMSGKQRVDKSEEEEEEGEEENDGKAIFKWNTHKKK 1108

Query: 247  RSNFPGPGSSSDSRGQSSNG 188
            RS +    SSSDSR QSSNG
Sbjct: 1109 RSRYSFTCSSSDSRAQSSNG 1128

>gb|EAA07939.1| agCP1271 [Anopheles gambiae str. PEST]
          Length = 499

 Score = 37.7 bits (86), Expect = 0.064
 Identities = 18/62 (29%), Positives = 29/62 (46%)
 Frame = -3

Query: 376 FHVTPASKRFKPEGTNFQRHAYEDVRGSGLNQHLLSWNTHRKKRSNFPGPGSSSDSRGQS 197
           +H T  ++R   E  N+ ++ Y +   SG N HL   + +       PG G+S  S G  
Sbjct: 131 YHYTAIAQRLPEENNNYTQNTYANAATSGTNGHLGGSSGNTNGNGGAPGTGNSVGSTGSD 190

Query: 196 SN 191
           +N
Sbjct: 191 NN 192

>ref|NP_197432.1| homeotic gene regulator - like protein; protein id: At5g19310.1
            [Arabidopsis thaliana]
          Length = 1041

 Score = 33.5 bits (75), Expect = 1.2
 Identities = 15/29 (51%), Positives = 21/29 (71%)
 Frame = -3

Query: 277  LLSWNTHRKKRSNFPGPGSSSDSRGQSSN 191
            L SW T++KKRS +P   SS +SRG+ S+
Sbjct: 1007 LHSWKTNKKKRSRYPVMTSSPNSRGKGSS 1035

>gb|AAN64487.1| hypothetical protein [Oryza sativa (japonica cultivar-group)]
          Length = 1019

 Score = 33.1 bits (74), Expect = 1.6
 Identities = 35/125 (28%), Positives = 47/125 (37%), Gaps = 11/125 (8%)
 Frame = -3

Query: 469 QASDNAVAEESLL-------YRAESASMASERTSEEDSFHVTPASKRFKPEGTNFQRHAY 311
           Q+S N + E S+        +   S   A    SE+D   V+  S   KP G     +  
Sbjct: 527 QSSSNPIPEPSISNSRNRFGFDGMSQGSAEMDCSEDDDNIVSHLSTTNKPHGGTLGNNQT 586

Query: 310 EDVRGSGLN-QHLLSWNTHRK---KRSNFPGPGSSSDSRGQSSNGKANWN*SKLKFSHCC 143
            D  GSG N Q     NTH+      +     G S D R    +G          F H C
Sbjct: 587 SDSMGSGRNLQKEHDSNTHQNCSFVTNKIDMQGISDDKRINVKDG---------VFPHSC 637

Query: 142 QSSHK 128
           Q+SH+
Sbjct: 638 QNSHQ 642

>ref|NP_484415.1| probable integral membrane efflux protein [Nostoc sp. PCC 7120]
           gi|25529668|pir||AB1853 hypothetical protein all0371
           [imported] - Nostoc sp. (strain PCC 7120)
           gi|17129716|dbj|BAB72329.1| ORF_ID:all0371~probable
           integral membrane efflux protein [Nostoc sp. PCC 7120]
          Length = 422

 Score = 32.7 bits (73), Expect = 2.0
 Identities = 23/68 (33%), Positives = 36/68 (52%), Gaps = 1/68 (1%)
 Frame = +3

Query: 276 RCWFKPLPLTSSYACLWKFVPSGLNLFEAGVTWKLSSSLVLSLAMEALSAL-YSKLSSAT 452
           R + KP    +S A +W+ +P  +N+F    TW  SS  + S+A  AL  L  + L SAT
Sbjct: 133 RAFLKP----ASDAIMWQLIP--VNVFTNAATWNSSSFQLASVAGPALGGLGIAVLGSAT 186

Query: 453 ALSLACAM 476
            + +  A+
Sbjct: 187 GVYILAAI 194

  Database: nr
    Posted date:  Apr 1, 2003  2:05 AM
  Number of letters in database: 448,689,247
  Number of sequences in database:  1,393,205
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 396,402,019
Number of Sequences: 1393205
Number of extensions: 8279187
Number of successful extensions: 19557
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 19040
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19540
length of database: 448,689,247
effective HSP length: 113
effective length of database: 291,257,082
effective search space used: 13106568690
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

EST assemble image

clone accession position 1 MFBL030a03_f BP042743 1 475 2 SPDL054c04_f BP055396 18 477

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