>KMC017199A_C01 KMC017199A_c01
aagcaaccaaatcaggaccttgtgataagaagtcatgaactatccgtttagatacacggt
aaaaatctACGGTGAACCAAAATTACGGTGAAAGTACATATTTGGATACACAGTAAAAAA
TCAGGTTGAAGTCAAAATCATGATCGACAGAAGCAAAAACTAATGTAAGTTACTTCTATC
TATCATGATTCTATTGTATGTCTTAACATGCGCTAAAGAGAAGATAATACAAAGAGAAAT
ATTTGTCCCCTCTATAAATGATTTTTACACCTGAAACTCGGTAACTTCAGCAAATGTCCC
TGTTATATACAATTTGTTTCTTCTATTTCCTAAGCAGGTATTTTCAAAATGGATCATTTG
GTCTCAAACTTGTGCATCTTTATTATTTAACAAATCCACCGATGCTAGCACTGTCTCCGC
CATTAAGCTTTGTGGCCGCCATGCCAAGATCAAAAGGTCCCATAGAGTCATTCCATTTGA
TGCCTGTTAACCCAAGACTTCTTTCATCATCATACAAACGTGAAGAAAGCG

BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KMC017199A_C01 KMC017199A_c01
         (531 letters)

Database: nr 
           1,393,205 sequences; 448,689,247 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

ref|NP_195648.1| hypothetical protein; protein id: At4g39380.1 [...    52  6e-06
ref|NP_779292.1| conserved hypothetical protein [Xylella fastidi...    32  6.1
ref|NP_299000.1| conserved hypothetical protein [Xylella fastidi...    32  6.1
gb|ZP_00040289.1| hypothetical protein [Xylella fastidiosa Ann-1]      32  6.1
gb|EAA22740.1| hypothetical protein [Plasmodium yoelii yoelii]         31  8.0

>ref|NP_195648.1| hypothetical protein; protein id: At4g39380.1 [Arabidopsis
           thaliana] gi|7486046|pir||T09354 hypothetical protein
           F23K16.10 - Arabidopsis thaliana
           gi|5042154|emb|CAB44673.1| hypothetical protein
           [Arabidopsis thaliana] gi|7270922|emb|CAB80601.1|
           hypothetical protein [Arabidopsis thaliana]
          Length = 518

 Score = 51.6 bits (122), Expect = 6e-06
 Identities = 24/49 (48%), Positives = 34/49 (68%), Gaps = 1/49 (2%)
 Frame = -3

Query: 529 LSSRLYDDERSLGLTGIKWNDSMGPFDLGMAAT-KLNGGDSASIGGFVK 386
           L S +++ + SLGL+GIKW +S GPFD G++++ K   GDS S G  VK
Sbjct: 453 LGSSVFNQDSSLGLSGIKWAESRGPFDFGLSSSRKFANGDSVSFGAVVK 501

>ref|NP_779292.1| conserved hypothetical protein [Xylella fastidiosa Temecula1]
           gi|28057076|gb|AAO28941.1| conserved hypothetical
           protein [Xylella fastidiosa Temecula1]
          Length = 114

 Score = 31.6 bits (70), Expect = 6.1
 Identities = 19/45 (42%), Positives = 25/45 (55%)
 Frame = +2

Query: 167 KLLLSIMILLYVLTCAKEKIIQREIFVPSINDFYT*NSVTSANVP 301
           ++L  I  LL +    K KI++ EIF+  INDF   N V  A VP
Sbjct: 41  QVLAEIDRLLALAASDKSKILRAEIFLADINDFSGMNEVWDAWVP 85

>ref|NP_299000.1| conserved hypothetical protein [Xylella fastidiosa 9a5c]
           gi|11360789|pir||B82646 conserved hypothetical protein
           XF1711 [imported] - Xylella fastidiosa (strain 9a5c)
           gi|9106777|gb|AAF84520.1|AE003995_2 conserved
           hypothetical protein [Xylella fastidiosa 9a5c]
          Length = 117

 Score = 31.6 bits (70), Expect = 6.1
 Identities = 19/45 (42%), Positives = 25/45 (55%)
 Frame = +2

Query: 167 KLLLSIMILLYVLTCAKEKIIQREIFVPSINDFYT*NSVTSANVP 301
           ++L  I  LL +    K KI++ EIF+  INDF   N V  A VP
Sbjct: 44  QVLAEIDRLLALAASDKSKILRAEIFLADINDFSGMNEVWDAWVP 88

>gb|ZP_00040289.1| hypothetical protein [Xylella fastidiosa Ann-1]
          Length = 117

 Score = 31.6 bits (70), Expect = 6.1
 Identities = 19/45 (42%), Positives = 25/45 (55%)
 Frame = +2

Query: 167 KLLLSIMILLYVLTCAKEKIIQREIFVPSINDFYT*NSVTSANVP 301
           ++L  I  LL +    K KI++ EIF+  INDF   N V  A VP
Sbjct: 44  QVLAEIDRLLALAASDKSKILRAEIFLADINDFSGMNEVWDAWVP 88

>gb|EAA22740.1| hypothetical protein [Plasmodium yoelii yoelii]
          Length = 842

 Score = 31.2 bits (69), Expect = 8.0
 Identities = 25/82 (30%), Positives = 39/82 (47%), Gaps = 4/82 (4%)
 Frame = +2

Query: 200 VLTCAKEKIIQREIFVPSINDFYT*NSVTSANVPVIYNL----FLLFPKQVFSKWIIWSQ 367
           +L+CA    IQRE+F+ S+ DF    ++    + +I+ L    F  F     SK IIW  
Sbjct: 705 ILSCAT-LAIQREVFIISMKDFKFSKNINKRTLVLIFTLLFFVFSFFISTKNSKDIIW-- 761

Query: 368 TCASLLFNKSTDASTVSAIKLC 433
               L F  S +   + A+ +C
Sbjct: 762 ---FLSFTISDNGRILVALLIC 780

  Database: nr
    Posted date:  Apr 1, 2003  2:05 AM
  Number of letters in database: 448,689,247
  Number of sequences in database:  1,393,205
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 428,529,272
Number of Sequences: 1393205
Number of extensions: 8502900
Number of successful extensions: 15543
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 15110
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15540
length of database: 448,689,247
effective HSP length: 115
effective length of database: 288,470,672
effective search space used: 17596710992
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

EST assemble image

clone accession position 1 SPDL068b11_f BP056207 1 531 2 SPDL053h10_f BP055376 69 396

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