Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC017196A_C01 KMC017196A_c01
(531 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAC22214.1| putative plastid protein [Oryza sativa (japonica... 121 4e-27
ref|NP_180901.1| plastid protein; protein id: At2g33430.1, suppo... 120 1e-26
emb|CAA75116.1| DAL1 protein [Arabidopsis thaliana] gi|2440031|e... 120 1e-26
gb|AAM66959.1| plastid protein [Arabidopsis thaliana] 120 1e-26
pir||T52623 DAG protein homolog [imported] - Arabidopsis thalian... 120 1e-26
>dbj|BAC22214.1| putative plastid protein [Oryza sativa (japonica cultivar-group)]
Length = 227
Score = 121 bits (304), Expect = 4e-27
Identities = 53/69 (76%), Positives = 63/69 (90%)
Frame = -2
Query: 530 KKRIYSISCEKYLGFGCEIDEETSDKLDGKAGIMFVLPDSYVDPEYQDYGGELFVNGAIV 351
KK+IY++SCE+Y GFGCEIDEETS+KL+G G++FVLPDSYVDPEY+DYG ELFVNG IV
Sbjct: 131 KKKIYNVSCERYFGFGCEIDEETSNKLEGLPGVLFVLPDSYVDPEYKDYGAELFVNGEIV 190
Query: 350 QRPPERQKR 324
QR PERQ+R
Sbjct: 191 QRSPERQRR 199
>ref|NP_180901.1| plastid protein; protein id: At2g33430.1, supported by cDNA: 8717.,
supported by cDNA: gi_17933284, supported by cDNA:
gi_20453404 [Arabidopsis thaliana]
gi|25370551|pir||D84745 plastid protein [imported] -
Arabidopsis thaliana gi|2459425|gb|AAB80660.1| plastid
protein [Arabidopsis thaliana]
gi|17933285|gb|AAL48226.1|AF446351_1 At2g33430/F4P9.20
[Arabidopsis thaliana] gi|20453405|gb|AAM19941.1|
At2g33430/F4P9.20 [Arabidopsis thaliana]
Length = 219
Score = 120 bits (300), Expect = 1e-26
Identities = 54/69 (78%), Positives = 62/69 (89%)
Frame = -2
Query: 530 KKRIYSISCEKYLGFGCEIDEETSDKLDGKAGIMFVLPDSYVDPEYQDYGGELFVNGAIV 351
KKRIY++SCE+YLGFGCEIDEETS KL+G G++FVLPDSYVDPE +DYG ELFVNG IV
Sbjct: 123 KKRIYNVSCERYLGFGCEIDEETSTKLEGLPGVLFVLPDSYVDPENKDYGAELFVNGEIV 182
Query: 350 QRPPERQKR 324
QR PERQ+R
Sbjct: 183 QRSPERQRR 191
>emb|CAA75116.1| DAL1 protein [Arabidopsis thaliana] gi|2440031|emb|CAA75115.1| DAL1
protein [Arabidopsis thaliana]
Length = 219
Score = 120 bits (300), Expect = 1e-26
Identities = 54/69 (78%), Positives = 62/69 (89%)
Frame = -2
Query: 530 KKRIYSISCEKYLGFGCEIDEETSDKLDGKAGIMFVLPDSYVDPEYQDYGGELFVNGAIV 351
KKRIY++SCE+YLGFGCEIDEETS KL+G G++FVLPDSYVDPE +DYG ELFVNG IV
Sbjct: 123 KKRIYNVSCERYLGFGCEIDEETSTKLEGLPGVLFVLPDSYVDPENKDYGAELFVNGEIV 182
Query: 350 QRPPERQKR 324
QR PERQ+R
Sbjct: 183 QRSPERQRR 191
>gb|AAM66959.1| plastid protein [Arabidopsis thaliana]
Length = 219
Score = 120 bits (300), Expect = 1e-26
Identities = 54/69 (78%), Positives = 62/69 (89%)
Frame = -2
Query: 530 KKRIYSISCEKYLGFGCEIDEETSDKLDGKAGIMFVLPDSYVDPEYQDYGGELFVNGAIV 351
KKRIY++SCE+YLGFGCEIDEETS KL+G G++FVLPDSYVDPE +DYG ELFVNG IV
Sbjct: 123 KKRIYNVSCERYLGFGCEIDEETSTKLEGLPGVLFVLPDSYVDPENKDYGAELFVNGEIV 182
Query: 350 QRPPERQKR 324
QR PERQ+R
Sbjct: 183 QRSPERQRR 191
>pir||T52623 DAG protein homolog [imported] - Arabidopsis thaliana
gi|2246378|emb|CAB06698.1| plastid protein [Arabidopsis
thaliana]
Length = 198
Score = 120 bits (300), Expect = 1e-26
Identities = 54/69 (78%), Positives = 62/69 (89%)
Frame = -2
Query: 530 KKRIYSISCEKYLGFGCEIDEETSDKLDGKAGIMFVLPDSYVDPEYQDYGGELFVNGAIV 351
KKRIY++SCE+YLGFGCEIDEETS KL+G G++FVLPDSYVDPE +DYG ELFVNG IV
Sbjct: 102 KKRIYNVSCERYLGFGCEIDEETSTKLEGLPGVLFVLPDSYVDPENKDYGAELFVNGEIV 161
Query: 350 QRPPERQKR 324
QR PERQ+R
Sbjct: 162 QRSPERQRR 170
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 459,600,851
Number of Sequences: 1393205
Number of extensions: 9798333
Number of successful extensions: 26598
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 25675
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26589
length of database: 448,689,247
effective HSP length: 115
effective length of database: 288,470,672
effective search space used: 17596710992
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
