Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC017160A_C01 KMC017160A_c01
(498 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_192217.1| putative phospho-ser/thr phosphatase; protein i... 88 5e-17
gb|AAM83219.1| AT4g03080/T4I9_4 [Arabidopsis thaliana] 88 5e-17
pir||E86217 probable phosphoprotein phosphatase (EC 3.1.3.16) T2... 45 1e-04
ref|NP_172318.1| protein serine/threonine phosphatase alpha, put... 45 1e-04
ref|NP_180289.1| putative phosphoprotein phosphatase; protein id... 44 0.001
>ref|NP_192217.1| putative phospho-ser/thr phosphatase; protein id: At4g03080.1
[Arabidopsis thaliana] gi|7488152|pir||T01385 probable
phosphoprotein phosphatase (EC 3.1.3.16) T4I9.4 -
Arabidopsis thaliana gi|3924596|gb|AAC79097.1| putative
phospho-ser/thr phosphatase [Arabidopsis thaliana]
gi|7270178|emb|CAB77793.1| putative phospho-ser/thr
phosphatase [Arabidopsis thaliana]
Length = 894
Score = 88.2 bits (217), Expect = 5e-17
Identities = 41/61 (67%), Positives = 46/61 (75%)
Frame = +2
Query: 296 MGSKPWLHPAPPYRPLESHWDTDEDDPGPRCGHTLTAVAATKSARSALNPLRRATAIEGG 475
MGSKPWLHPAP Y+ LE+ WD ++D PGPRC HTLTAVAATK+ L ATAIEGG
Sbjct: 1 MGSKPWLHPAPQYKTLETFWDDEDDAPGPRCAHTLTAVAATKTHGPRLILFGGATAIEGG 60
Query: 476 S 478
S
Sbjct: 61 S 61
>gb|AAM83219.1| AT4g03080/T4I9_4 [Arabidopsis thaliana]
Length = 881
Score = 88.2 bits (217), Expect = 5e-17
Identities = 41/61 (67%), Positives = 46/61 (75%)
Frame = +2
Query: 296 MGSKPWLHPAPPYRPLESHWDTDEDDPGPRCGHTLTAVAATKSARSALNPLRRATAIEGG 475
MGSKPWLHPAP Y+ LE+ WD ++D PGPRC HTLTAVAATK+ L ATAIEGG
Sbjct: 1 MGSKPWLHPAPQYKTLETFWDDEDDAPGPRCAHTLTAVAATKTHGPRLILFGGATAIEGG 60
Query: 476 S 478
S
Sbjct: 61 S 61
>pir||E86217 probable phosphoprotein phosphatase (EC 3.1.3.16) T27G7.10 -
Arabidopsis thaliana gi|6664307|gb|AAF22889.1|AC006932_6
T27G7.10 [Arabidopsis thaliana]
Length = 1088
Score = 45.4 bits (106), Expect(2) = 1e-04
Identities = 26/58 (44%), Positives = 32/58 (54%), Gaps = 6/58 (10%)
Frame = +2
Query: 323 APPYRPLESHWDTDEDDPGPRCGHTLTAVAAT--KSARSALNP----LRRATAIEGGS 478
AP Y +++ D ED PGPRCGHTLTAV A + + P ATA+EG S
Sbjct: 85 APTYSVVDAMMDKKEDGPGPRCGHTLTAVPAVGDEGTPGYIGPRLVLFGGATALEGNS 142
Score = 21.2 bits (43), Expect(2) = 1e-04
Identities = 7/13 (53%), Positives = 9/13 (68%)
Frame = +1
Query: 175 GASPGPPPAPPPP 213
G+ P PPP+ P P
Sbjct: 47 GSVPTPPPSDPNP 59
>ref|NP_172318.1| protein serine/threonine phosphatase alpha, putative; protein id:
At1g08420.1 [Arabidopsis thaliana]
Length = 1018
Score = 45.4 bits (106), Expect(2) = 1e-04
Identities = 26/58 (44%), Positives = 32/58 (54%), Gaps = 6/58 (10%)
Frame = +2
Query: 323 APPYRPLESHWDTDEDDPGPRCGHTLTAVAAT--KSARSALNP----LRRATAIEGGS 478
AP Y +++ D ED PGPRCGHTLTAV A + + P ATA+EG S
Sbjct: 85 APTYSVVDAMMDKKEDGPGPRCGHTLTAVPAVGDEGTPGYIGPRLVLFGGATALEGNS 142
Score = 21.2 bits (43), Expect(2) = 1e-04
Identities = 7/13 (53%), Positives = 9/13 (68%)
Frame = +1
Query: 175 GASPGPPPAPPPP 213
G+ P PPP+ P P
Sbjct: 47 GSVPTPPPSDPNP 59
>ref|NP_180289.1| putative phosphoprotein phosphatase; protein id: At2g27210.1
[Arabidopsis thaliana] gi|25513447|pir||B84670 probable
phosphoprotein phosphatase (EC 3.1.3.16) At2g27210
[similarity] - Arabidopsis thaliana
gi|4646217|gb|AAD26883.1| putative phosphoprotein
phosphatase [Arabidopsis thaliana]
Length = 715
Score = 43.9 bits (102), Expect = 0.001
Identities = 26/58 (44%), Positives = 32/58 (54%), Gaps = 6/58 (10%)
Frame = +2
Query: 323 APPYRPLESHWDTDEDDPGPRCGHTLTAVAAT--KSARSALNP----LRRATAIEGGS 478
AP Y + + + ED PGPRCGHTLTAV A + S + P ATA+EG S
Sbjct: 50 APTYSVVNAIIEKKEDGPGPRCGHTLTAVPAVGEEGTSSYIGPRLILFGGATALEGNS 107
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 521,596,779
Number of Sequences: 1393205
Number of extensions: 13744374
Number of successful extensions: 242585
Number of sequences better than 10.0: 1074
Number of HSP's better than 10.0 without gapping: 81326
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 190579
length of database: 448,689,247
effective HSP length: 114
effective length of database: 289,863,877
effective search space used: 14783057727
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
